Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: combined
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | CD24 | 100133941 | 1645 | 1.52 | 0.99 | 0.52 | 0 | 0 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | MAL | 4118 | 6817 | 1.32 | 0.63 | 0.09 | 0 | 0 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | LIMCH1 | 22998 | 29191 | 1.2 | 0.68 | 0.09 | 0 | 0 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | CLDN10 | 9071 | 2033 | 1.17 | 0.52 | 0.08 | 0 | 0 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | ELF3 | 1999 | 3318 | 1.09 | 0.72 | 0.16 | 0 | 0 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | LINC02381 | 400043 | 53304 | 1.08 | 0.6 | 0.12 | 0 | 0 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | TUBB2B | 347733 | 30829 | 1.03 | 0.82 | 0.31 | 4.72178119177705e-247 | 1.59095695475736e-242 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | MECOM | 2122 | 3498 | 1 | 0.49 | 0.05 | 0 | 0 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | CEBPD | 1052 | 1835 | 0.96 | 0.79 | 0.33 | 1.22626216993116e-203 | 4.13176775536603e-199 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | DNER | 92737 | 24456 | 0.94 | 0.5 | 0.04 | 0 | 0 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | HES1 | 3280 | 5192 | 0.92 | 0.97 | 0.75 | 5.9319805211894e-161 | 1.99872151680956e-156 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | CLDN4 | 1364 | 2046 | 0.92 | 0.65 | 0.11 | 0 | 0 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | EGR1 | 1958 | 3238 | 0.89 | 0.82 | 0.42 | 1.60112203288033e-162 | 5.394820577587e-158 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | MITF | 4286 | 7105 | 0.89 | 0.59 | 0.09 | 0 | 0 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | PAPPA2 | 60676 | 14615 | 0.87 | 0.27 | 0.01 | 0 | 0 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | EPCAM | 4072 | 11529 | 0.87 | 0.9 | 0.41 | 6.92199160327086e-222 | 2.33229585080608e-217 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | DKK1 | 22943 | 2891 | 0.86 | 0.3 | 0.04 | 8.36987724822233e-199 | 2.82014644001603e-194 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | ADAMTS1 | 9510 | 217 | 0.85 | 0.56 | 0.22 | 1.28334389765914e-121 | 4.32409892877271e-117 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | TSPAN15 | 23555 | 23298 | 0.84 | 0.5 | 0.06 | 0 | 0 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | CLDN3 | 1365 | 2045 | 0.83 | 0.76 | 0.27 | 8.36759766652237e-225 | 2.81937835775805e-220 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | TCIM | 56892 | 1357 | 0.76 | 0.53 | 0.13 | 7.01033066814933e-204 | 2.36206081532623e-199 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | SPP1 | 6696 | 11255 | 0.76 | 0.52 | 0.11 | 4.01553259766267e-244 | 1.35299355345646e-239 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | VAV3 | 10451 | 12659 | 0.76 | 0.41 | 0.07 | 4.70548804282213e-237 | 1.58546714114849e-232 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | PTGR1 | 22949 | 18429 | 0.74 | 0.66 | 0.4 | 7.32936838472517e-69 | 2.4695573835493e-64 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | OVOL1 | 5017 | 8525 | 0.74 | 0.41 | 0.04 | 0 | 0 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | WFDC2 | 10406 | 15939 | 0.74 | 0.61 | 0.2 | 3.55916866832508e-173 | 1.19922629110545e-168 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | IRX1 | 79192 | 14358 | 0.72 | 0.41 | 0.03 | 0 | 0 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | SOSTDC1 | 25928 | 21748 | 0.72 | 0.47 | 0.07 | 3.36168012161076e-295 | 1.13268450017553e-290 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | HOXD8 | 3234 | 5139 | 0.7 | 0.56 | 0.16 | 3.6291425393563e-187 | 1.22280328721071e-182 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | ODC1 | 4953 | 8109 | 0.7 | 0.83 | 0.64 | 2.91548792583637e-48 | 9.82344501731305e-44 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | HMGA1 | 3159 | 5010 | 0.7 | 0.87 | 0.45 | 5.68361056668059e-161 | 1.91503574433736e-156 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | RBM47 | 54502 | 30358 | 0.69 | 0.57 | 0.17 | 4.10162889951599e-174 | 1.38200284140292e-169 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | MGLL | 11343 | 17038 | 0.68 | 0.45 | 0.06 | 0 | 0 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | KLF5 | 688 | 6349 | 0.67 | 0.41 | 0.06 | 6.00257914327666e-261 | 2.02250901653564e-256 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | RIPK4 | 54101 | 496 | 0.67 | 0.44 | 0.1 | 4.63810521131802e-204 | 1.56276316990149e-199 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | SLC12A1 | 6557 | 10910 | 0.66 | 0.23 | 0.01 | 0 | 0 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | FXYD2 | 486 | 4026 | 0.65 | 0.51 | 0.13 | 4.4977913427051e-193 | 1.51548581501106e-188 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | LRATD2 | 157638 | 24166 | 0.65 | 0.43 | 0.09 | 8.67022007324846e-211 | 2.92134395148033e-206 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | ERBB4 | 2066 | 3432 | 0.63 | 0.45 | 0.08 | 2.56056602126171e-262 | 8.62757115203921e-258 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | AKIRIN1 | 79647 | 25744 | 0.62 | 0.76 | 0.42 | 1.06572033642631e-114 | 3.5908381015548e-110 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | MPC2 | 25874 | 24515 | 0.62 | 0.83 | 0.45 | 1.07090914872041e-134 | 3.60832128569856e-130 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | IRX2 | 153572 | 14359 | 0.62 | 0.33 | 0.02 | 0 | 0 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | LDHB | 3945 | 6541 | 0.62 | 1 | 0.88 | 9.38863981187398e-158 | 3.16340829821282e-153 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | KLHL13 | 90293 | 22931 | 0.61 | 0.4 | 0.07 | 6.03576693446326e-223 | 2.03369131089805e-218 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | MCL1 | 4170 | 6943 | 0.61 | 0.81 | 0.51 | 1.00553648161243e-103 | 3.38805462114492e-99 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | EFNA1 | 1942 | 3221 | 0.61 | 0.56 | 0.21 | 1.62386473491955e-120 | 5.47144983783792e-116 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | CYS1 | 192668 | 18525 | 0.61 | 0.43 | 0.08 | 1.37584108517428e-224 | 4.63575895238623e-220 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | ZNF44 | 51710 | 13110 | 0.61 | 0.39 | 0.08 | 1.2814561335658e-192 | 4.3177382964366e-188 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | PERP | 64065 | 17637 | 0.6 | 0.44 | 0.09 | 2.70362756719915e-214 | 9.10960272492081e-210 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | HLA-DMB | 3109 | 4935 | 0.6 | 0.44 | 0.11 | 2.35734997771957e-169 | 7.94285501492832e-165 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | HOXB8 | 3218 | 5119 | 0.6 | 0.44 | 0.1 | 4.70156170034412e-194 | 1.58414419931395e-189 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | CARMIL1 | 55604 | 21581 | 0.6 | 0.42 | 0.11 | 6.2694221413843e-135 | 2.11241909631802e-130 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | IER2 | 9592 | 28871 | 0.6 | 0.92 | 0.71 | 6.93736987355483e-103 | 2.33747740519556e-98 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | TFAP2B | 7021 | 11743 | 0.59 | 0.24 | 0.01 | 0 | 0 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | EPHA4 | 2043 | 3388 | 0.59 | 0.36 | 0.06 | 3.10365877692215e-199 | 1.04574678829615e-194 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | CCN1 | 3491 | 2654 | 0.59 | 0.86 | 0.57 | 9.18441419382336e-91 | 3.09459651846684e-86 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | HNF1B | 6928 | 11630 | 0.59 | 0.5 | 0.14 | 3.81826656610098e-167 | 1.28652673678206e-162 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | ESRRG | 2104 | 3474 | 0.59 | 0.33 | 0.03 | 0 | 0 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | CLDN7 | 1366 | 2049 | 0.58 | 0.44 | 0.12 | 9.36501226479167e-151 | 3.15544723249891e-146 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | POU3F3 | 5455 | 9216 | 0.57 | 0.36 | 0.05 | 3.06043090739216e-264 | 1.03118158993671e-259 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | TSPAN8 | 7103 | 11855 | 0.57 | 0.33 | 0.08 | 5.6902431521314e-122 | 1.91727052767915e-117 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | PLEKHA1 | 59338 | 14335 | 0.56 | 0.56 | 0.26 | 7.75729035765743e-87 | 2.6137414131091e-82 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | GLRX | 2745 | 4330 | 0.56 | 0.41 | 0.1 | 4.56675313480159e-155 | 1.53872180124005e-150 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | EGR2 | 1959 | 3239 | 0.56 | 0.39 | 0.12 | 4.16102435109599e-103 | 1.40201554485828e-98 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | DMKN | 93099 | 25063 | 0.56 | 0.49 | 0.15 | 2.80774413355874e-138 | 9.4604130836128e-134 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | SPINT1 | 6692 | 11246 | 0.55 | 0.39 | 0.09 | 3.43698942747355e-158 | 1.15805921769294e-153 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | KIF12 | 113220 | 21495 | 0.54 | 0.5 | 0.16 | 1.31284543157827e-128 | 4.42350139715981e-124 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | CPM | 1368 | 2311 | 0.54 | 0.3 | 0.05 | 4.45448487315791e-186 | 1.50089413316183e-181 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | JAG1 | 182 | 6188 | 0.54 | 0.55 | 0.24 | 3.08763839522462e-88 | 1.04034888088698e-83 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | SMS | 6611 | 11123 | 0.54 | 0.78 | 0.46 | 7.40414926715859e-87 | 2.49475405407642e-82 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | NUDT4 | 11163 | 8051 | 0.53 | 0.55 | 0.29 | 1.15809147432448e-66 | 3.90207341358892e-62 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | TMEM72 | 643236 | 31658 | 0.53 | 0.25 | 0.02 | 0 | 0 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | HOXB3 | 3213 | 5114 | 0.53 | 0.41 | 0.14 | 1.94854566454295e-102 | 6.56542976211101e-98 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | KCTD1 | 284252 | 18249 | 0.53 | 0.36 | 0.1 | 3.58636218825275e-122 | 1.20838887570988e-117 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | SNHG8 | 100093630 | 33098 | 0.53 | 0.77 | 0.47 | 2.03361502309857e-87 | 6.85206245882832e-83 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | TJP2 | 9414 | 11828 | 0.52 | 0.36 | 0.07 | 2.84943365754866e-191 | 9.60088176574444e-187 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | FOS | 2353 | 3796 | 0.52 | 0.94 | 0.75 | 9.87110374969857e-87 | 3.32596969742344e-82 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | DUSP6 | 1848 | 3072 | 0.52 | 0.44 | 0.17 | 2.68893847839779e-92 | 9.06010930911352e-88 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | DCDC2 | 51473 | 18141 | 0.51 | 0.53 | 0.2 | 8.07328245051845e-106 | 2.72021178887769e-101 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | KCNJ15 | 3772 | 6261 | 0.51 | 0.34 | 0.08 | 3.06379212565438e-133 | 1.03231411881799e-128 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | HOXB2 | 3212 | 5113 | 0.51 | 0.53 | 0.23 | 4.15139729420823e-88 | 1.39877180431052e-83 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | DUSP9 | 1852 | 3076 | 0.51 | 0.39 | 0.13 | 4.90078829148836e-99 | 1.65127160693409e-94 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | CLDN19 | 149461 | 2040 | 0.5 | 0.32 | 0.04 | 1.46062798708558e-265 | 4.92143993968616e-261 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | PHGDH | 26227 | 8923 | 0.5 | 0.71 | 0.36 | 2.53007839019134e-90 | 8.52484612791069e-86 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | SOCS3 | 9021 | 19391 | 0.5 | 0.49 | 0.27 | 1.243171248022e-44 | 4.18874120308531e-40 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | C5orf38 | 153571 | 24226 | 0.49 | 0.23 | 0.01 | 0 | 0 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | ANXA4 | 307 | 542 | 0.49 | 0.62 | 0.27 | 2.89999610570748e-98 | 9.7712468785708e-94 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | ANXA11 | 311 | 535 | 0.49 | 0.47 | 0.18 | 9.48214457632749e-90 | 3.19491379354779e-85 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | UGT8 | 7368 | 12555 | 0.49 | 0.32 | 0.07 | 7.36541713042769e-129 | 2.4817036479263e-124 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | SPON1 | 10418 | 11252 | 0.49 | 0.34 | 0.08 | 1.15170352430375e-127 | 3.88054985478905e-123 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | ADAMTS9-AS1 | 101929335 | 40625 | 0.48 | 0.29 | 0.06 | 8.57218433658368e-117 | 2.88831179036851e-112 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | EDIL3 | 10085 | 3173 | 0.48 | 0.28 | 0.05 | 3.19686493991505e-140 | 1.07715167285498e-135 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | CCDC198 | 55195 | 20189 | 0.48 | 0.46 | 0.15 | 5.29130842648171e-120 | 1.78285346121875e-115 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | MAFF | 23764 | 6780 | 0.48 | 0.45 | 0.21 | 3.42212519257804e-58 | 1.15305086238724e-53 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | EIF3F | 8665 | 3275 | 0.48 | 0.95 | 0.74 | 8.4293161824823e-101 | 2.84017379452558e-96 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | TSPAN12 | 23554 | 21641 | 0.48 | 0.66 | 0.34 | 2.33597840296486e-79 | 7.87084563094979e-75 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | CXCR4 | 7852 | 2561 | 0.48 | 0.39 | 0.13 | 1.51159359032574e-88 | 5.09316344324356e-84 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | EEF2 | 1938 | 3214 | 0.48 | 0.99 | 0.95 | 2.70175567943224e-139 | 9.103295586279e-135 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | ATP1B1 | 481 | 804 | 0.48 | 0.64 | 0.32 | 4.52571756193705e-76 | 1.52489527531907e-71 |
70 | 18 | SSBm/d | S-shaped body medial/distal | combined | RAB3IP | 117177 | 16508 | 0.47 | 0.46 | 0.17 | 9.61945649305807e-97 | 3.24117967077099e-92 |