Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: combined
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | CD24 | 100133941 | 1645 | 1.52 | 0.99 | 0.52 | 0 | 0 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | MAL | 4118 | 6817 | 1.32 | 0.63 | 0.09 | 0 | 0 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | LIMCH1 | 22998 | 29191 | 1.2 | 0.68 | 0.09 | 0 | 0 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | CLDN10 | 9071 | 2033 | 1.17 | 0.52 | 0.08 | 0 | 0 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | ELF3 | 1999 | 3318 | 1.09 | 0.72 | 0.16 | 0 | 0 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | LINC02381 | 400043 | 53304 | 1.08 | 0.6 | 0.12 | 0 | 0 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | TUBB2B | 347733 | 30829 | 1.03 | 0.82 | 0.31 | 4.721781191777E-247 | 1.5909569547574E-242 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | MECOM | 2122 | 3498 | 1 | 0.49 | 0.05 | 0 | 0 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | CEBPD | 1052 | 1835 | 0.96 | 0.79 | 0.33 | 1.2262621699312E-203 | 4.131767755366E-199 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | DNER | 92737 | 24456 | 0.94 | 0.5 | 0.04 | 0 | 0 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | HES1 | 3280 | 5192 | 0.92 | 0.97 | 0.75 | 5.9319805211894E-161 | 1.9987215168096E-156 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | CLDN4 | 1364 | 2046 | 0.92 | 0.65 | 0.11 | 0 | 0 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | EGR1 | 1958 | 3238 | 0.89 | 0.82 | 0.42 | 1.6011220328803E-162 | 5.394820577587E-158 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | MITF | 4286 | 7105 | 0.89 | 0.59 | 0.09 | 0 | 0 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | PAPPA2 | 60676 | 14615 | 0.87 | 0.27 | 0.01 | 0 | 0 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | EPCAM | 4072 | 11529 | 0.87 | 0.9 | 0.41 | 6.9219916032709E-222 | 2.3322958508061E-217 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | DKK1 | 22943 | 2891 | 0.86 | 0.3 | 0.04 | 8.3698772482223E-199 | 2.820146440016E-194 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | ADAMTS1 | 9510 | 217 | 0.85 | 0.56 | 0.22 | 1.2833438976591E-121 | 4.3240989287727E-117 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | TSPAN15 | 23555 | 23298 | 0.84 | 0.5 | 0.06 | 0 | 0 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | CLDN3 | 1365 | 2045 | 0.83 | 0.76 | 0.27 | 8.3675976665224E-225 | 2.819378357758E-220 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | TCIM | 56892 | 1357 | 0.76 | 0.53 | 0.13 | 7.0103306681493E-204 | 2.3620608153262E-199 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | SPP1 | 6696 | 11255 | 0.76 | 0.52 | 0.11 | 4.0155325976627E-244 | 1.3529935534565E-239 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | VAV3 | 10451 | 12659 | 0.76 | 0.41 | 0.07 | 4.7054880428221E-237 | 1.5854671411485E-232 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | PTGR1 | 22949 | 18429 | 0.74 | 0.66 | 0.4 | 7.3293683847252E-69 | 2.4695573835493E-64 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | OVOL1 | 5017 | 8525 | 0.74 | 0.41 | 0.04 | 0 | 0 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | WFDC2 | 10406 | 15939 | 0.74 | 0.61 | 0.2 | 3.5591686683251E-173 | 1.1992262911054E-168 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | IRX1 | 79192 | 14358 | 0.72 | 0.41 | 0.03 | 0 | 0 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | SOSTDC1 | 25928 | 21748 | 0.72 | 0.47 | 0.07 | 3.3616801216108E-295 | 1.1326845001755E-290 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | HOXD8 | 3234 | 5139 | 0.7 | 0.56 | 0.16 | 3.6291425393563E-187 | 1.2228032872107E-182 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | ODC1 | 4953 | 8109 | 0.7 | 0.83 | 0.64 | 2.9154879258364E-48 | 9.823445017313E-44 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | HMGA1 | 3159 | 5010 | 0.7 | 0.87 | 0.45 | 5.6836105666806E-161 | 1.9150357443374E-156 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | RBM47 | 54502 | 30358 | 0.69 | 0.57 | 0.17 | 4.101628899516E-174 | 1.3820028414029E-169 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | MGLL | 11343 | 17038 | 0.68 | 0.45 | 0.06 | 0 | 0 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | KLF5 | 688 | 6349 | 0.67 | 0.41 | 0.06 | 6.0025791432767E-261 | 2.0225090165356E-256 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | RIPK4 | 54101 | 496 | 0.67 | 0.44 | 0.1 | 4.638105211318E-204 | 1.5627631699015E-199 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | SLC12A1 | 6557 | 10910 | 0.66 | 0.23 | 0.01 | 0 | 0 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | FXYD2 | 486 | 4026 | 0.65 | 0.51 | 0.13 | 4.4977913427051E-193 | 1.5154858150111E-188 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | LRATD2 | 157638 | 24166 | 0.65 | 0.43 | 0.09 | 8.6702200732485E-211 | 2.9213439514803E-206 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | ERBB4 | 2066 | 3432 | 0.63 | 0.45 | 0.08 | 2.5605660212617E-262 | 8.6275711520392E-258 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | AKIRIN1 | 79647 | 25744 | 0.62 | 0.76 | 0.42 | 1.0657203364263E-114 | 3.5908381015548E-110 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | MPC2 | 25874 | 24515 | 0.62 | 0.83 | 0.45 | 1.0709091487204E-134 | 3.6083212856986E-130 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | IRX2 | 153572 | 14359 | 0.62 | 0.33 | 0.02 | 0 | 0 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | LDHB | 3945 | 6541 | 0.62 | 1 | 0.88 | 9.388639811874E-158 | 3.1634082982128E-153 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | KLHL13 | 90293 | 22931 | 0.61 | 0.4 | 0.07 | 6.0357669344633E-223 | 2.033691310898E-218 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | MCL1 | 4170 | 6943 | 0.61 | 0.81 | 0.51 | 1.0055364816124E-103 | 3.3880546211449E-99 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | EFNA1 | 1942 | 3221 | 0.61 | 0.56 | 0.21 | 1.6238647349195E-120 | 5.4714498378379E-116 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | CYS1 | 192668 | 18525 | 0.61 | 0.43 | 0.08 | 1.3758410851743E-224 | 4.6357589523862E-220 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | ZNF44 | 51710 | 13110 | 0.61 | 0.39 | 0.08 | 1.2814561335658E-192 | 4.3177382964366E-188 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | PERP | 64065 | 17637 | 0.6 | 0.44 | 0.09 | 2.7036275671992E-214 | 9.1096027249208E-210 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | HLA-DMB | 3109 | 4935 | 0.6 | 0.44 | 0.11 | 2.3573499777196E-169 | 7.9428550149283E-165 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | HOXB8 | 3218 | 5119 | 0.6 | 0.44 | 0.1 | 4.7015617003441E-194 | 1.5841441993139E-189 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | CARMIL1 | 55604 | 21581 | 0.6 | 0.42 | 0.11 | 6.2694221413843E-135 | 2.112419096318E-130 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | IER2 | 9592 | 28871 | 0.6 | 0.92 | 0.71 | 6.9373698735548E-103 | 2.3374774051956E-98 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | TFAP2B | 7021 | 11743 | 0.59 | 0.24 | 0.01 | 0 | 0 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | EPHA4 | 2043 | 3388 | 0.59 | 0.36 | 0.06 | 3.1036587769222E-199 | 1.0457467882961E-194 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | CCN1 | 3491 | 2654 | 0.59 | 0.86 | 0.57 | 9.1844141938234E-91 | 3.0945965184668E-86 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | HNF1B | 6928 | 11630 | 0.59 | 0.5 | 0.14 | 3.818266566101E-167 | 1.2865267367821E-162 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | ESRRG | 2104 | 3474 | 0.59 | 0.33 | 0.03 | 0 | 0 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | CLDN7 | 1366 | 2049 | 0.58 | 0.44 | 0.12 | 9.3650122647917E-151 | 3.1554472324989E-146 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | POU3F3 | 5455 | 9216 | 0.57 | 0.36 | 0.05 | 3.0604309073922E-264 | 1.0311815899367E-259 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | TSPAN8 | 7103 | 11855 | 0.57 | 0.33 | 0.08 | 5.6902431521314E-122 | 1.9172705276791E-117 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | PLEKHA1 | 59338 | 14335 | 0.56 | 0.56 | 0.26 | 7.7572903576574E-87 | 2.6137414131091E-82 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | GLRX | 2745 | 4330 | 0.56 | 0.41 | 0.1 | 4.5667531348016E-155 | 1.53872180124E-150 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | EGR2 | 1959 | 3239 | 0.56 | 0.39 | 0.12 | 4.161024351096E-103 | 1.4020155448583E-98 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | DMKN | 93099 | 25063 | 0.56 | 0.49 | 0.15 | 2.8077441335587E-138 | 9.4604130836128E-134 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | SPINT1 | 6692 | 11246 | 0.55 | 0.39 | 0.09 | 3.4369894274735E-158 | 1.1580592176929E-153 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | KIF12 | 113220 | 21495 | 0.54 | 0.5 | 0.16 | 1.3128454315783E-128 | 4.4235013971598E-124 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | CPM | 1368 | 2311 | 0.54 | 0.3 | 0.05 | 4.4544848731579E-186 | 1.5008941331618E-181 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | JAG1 | 182 | 6188 | 0.54 | 0.55 | 0.24 | 3.0876383952246E-88 | 1.040348880887E-83 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | SMS | 6611 | 11123 | 0.54 | 0.78 | 0.46 | 7.4041492671586E-87 | 2.4947540540764E-82 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | NUDT4 | 11163 | 8051 | 0.53 | 0.55 | 0.29 | 1.1580914743245E-66 | 3.9020734135889E-62 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | TMEM72 | 643236 | 31658 | 0.53 | 0.25 | 0.02 | 0 | 0 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | HOXB3 | 3213 | 5114 | 0.53 | 0.41 | 0.14 | 1.948545664543E-102 | 6.565429762111E-98 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | KCTD1 | 284252 | 18249 | 0.53 | 0.36 | 0.1 | 3.5863621882528E-122 | 1.2083888757099E-117 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | SNHG8 | 100093630 | 33098 | 0.53 | 0.77 | 0.47 | 2.0336150230986E-87 | 6.8520624588283E-83 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | TJP2 | 9414 | 11828 | 0.52 | 0.36 | 0.07 | 2.8494336575487E-191 | 9.6008817657444E-187 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | FOS | 2353 | 3796 | 0.52 | 0.94 | 0.75 | 9.8711037496986E-87 | 3.3259696974234E-82 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | DUSP6 | 1848 | 3072 | 0.52 | 0.44 | 0.17 | 2.6889384783978E-92 | 9.0601093091135E-88 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | DCDC2 | 51473 | 18141 | 0.51 | 0.53 | 0.2 | 8.0732824505184E-106 | 2.7202117888777E-101 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | KCNJ15 | 3772 | 6261 | 0.51 | 0.34 | 0.08 | 3.0637921256544E-133 | 1.032314118818E-128 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | HOXB2 | 3212 | 5113 | 0.51 | 0.53 | 0.23 | 4.1513972942082E-88 | 1.3987718043105E-83 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | DUSP9 | 1852 | 3076 | 0.51 | 0.39 | 0.13 | 4.9007882914884E-99 | 1.6512716069341E-94 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | CLDN19 | 149461 | 2040 | 0.5 | 0.32 | 0.04 | 1.4606279870856E-265 | 4.9214399396862E-261 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | PHGDH | 26227 | 8923 | 0.5 | 0.71 | 0.36 | 2.5300783901913E-90 | 8.5248461279107E-86 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | SOCS3 | 9021 | 19391 | 0.5 | 0.49 | 0.27 | 1.243171248022E-44 | 4.1887412030853E-40 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | C5orf38 | 153571 | 24226 | 0.49 | 0.23 | 0.01 | 0 | 0 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | ANXA4 | 307 | 542 | 0.49 | 0.62 | 0.27 | 2.8999961057075E-98 | 9.7712468785708E-94 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | ANXA11 | 311 | 535 | 0.49 | 0.47 | 0.18 | 9.4821445763275E-90 | 3.1949137935478E-85 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | UGT8 | 7368 | 12555 | 0.49 | 0.32 | 0.07 | 7.3654171304277E-129 | 2.4817036479263E-124 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | SPON1 | 10418 | 11252 | 0.49 | 0.34 | 0.08 | 1.1517035243038E-127 | 3.880549854789E-123 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | ADAMTS9-AS1 | 101929335 | 40625 | 0.48 | 0.29 | 0.06 | 8.5721843365837E-117 | 2.8883117903685E-112 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | EDIL3 | 10085 | 3173 | 0.48 | 0.28 | 0.05 | 3.196864939915E-140 | 1.077151672855E-135 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | CCDC198 | 55195 | 20189 | 0.48 | 0.46 | 0.15 | 5.2913084264817E-120 | 1.7828534612187E-115 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | MAFF | 23764 | 6780 | 0.48 | 0.45 | 0.21 | 3.422125192578E-58 | 1.1530508623872E-53 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | EIF3F | 8665 | 3275 | 0.48 | 0.95 | 0.74 | 8.4293161824823E-101 | 2.8401737945256E-96 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | TSPAN12 | 23554 | 21641 | 0.48 | 0.66 | 0.34 | 2.3359784029649E-79 | 7.8708456309498E-75 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | CXCR4 | 7852 | 2561 | 0.48 | 0.39 | 0.13 | 1.5115935903257E-88 | 5.0931634432436E-84 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | EEF2 | 1938 | 3214 | 0.48 | 0.99 | 0.95 | 2.7017556794322E-139 | 9.103295586279E-135 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | ATP1B1 | 481 | 804 | 0.48 | 0.64 | 0.32 | 4.5257175619371E-76 | 1.5248952753191E-71 |
| 70 | 18 | SSBm/d | S-shaped body medial/distal | combined | RAB3IP | 117177 | 16508 | 0.47 | 0.46 | 0.17 | 9.6194564930581E-97 | 3.241179670771E-92 |