Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: combined
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | IGFBP7 | 3490 | 5476 | 1.19 | 0.77 | 0.55 | 2.741325220893E-120 | 9.2366211992768E-116 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | PAX8 | 7849 | 8622 | 1.03 | 0.82 | 0.36 | 2.6972300319562E-258 | 9.0880468696734E-254 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | CCN2 | 1490 | 2500 | 0.96 | 0.84 | 0.64 | 1.2561606846181E-101 | 4.2325078107522E-97 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | PCP4 | 5121 | 8742 | 0.91 | 0.36 | 0.06 | 8.9380152418458E-251 | 3.0115748555875E-246 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | C1QTNF12 | 388581 | 32308 | 0.91 | 0.42 | 0.09 | 9.6380205483517E-231 | 3.2474346435616E-226 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | TPM1 | 7168 | 12010 | 0.87 | 0.85 | 0.59 | 2.0413916650495E-131 | 6.8782650762179E-127 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | LRRTM1 | 347730 | 19408 | 0.79 | 0.42 | 0.09 | 1.0802543878417E-229 | 3.6398091343937E-225 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | CDH6 | 1004 | 1765 | 0.77 | 0.49 | 0.16 | 7.5425939386928E-164 | 2.5414016017032E-159 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | KRT19 | 3880 | 6436 | 0.76 | 0.66 | 0.31 | 3.7019226720728E-145 | 1.2473258251282E-140 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | IGFBP4 | 3487 | 5473 | 0.75 | 0.8 | 0.43 | 2.3604989366576E-167 | 7.953465117174E-163 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | AKAP12 | 9590 | 370 | 0.72 | 0.77 | 0.38 | 7.1268728409188E-158 | 2.4013285350192E-153 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | ADAMTS1 | 9510 | 217 | 0.7 | 0.53 | 0.22 | 1.2200644911933E-124 | 4.1108852966268E-120 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | LYPD1 | 116372 | 28431 | 0.69 | 0.61 | 0.27 | 7.5637266040079E-113 | 2.5485220419544E-108 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | QPRT | 23475 | 9755 | 0.69 | 0.78 | 0.57 | 1.6204029289466E-94 | 5.4597856287928E-90 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | CADM1 | 23705 | 5951 | 0.69 | 0.76 | 0.41 | 1.4402752194645E-131 | 4.8528633244638E-127 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | VIM | 7431 | 12692 | 0.68 | 0.89 | 0.84 | 8.8068406464184E-20 | 2.9673768874042E-15 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | DSP | 1832 | 3052 | 0.64 | 0.44 | 0.15 | 2.1841665980453E-127 | 7.3593309354538E-123 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | PMP22 | 5376 | 9118 | 0.63 | 0.38 | 0.14 | 1.6160530526733E-86 | 5.4451291556773E-82 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | SLIT3 | 6586 | 11087 | 0.62 | 0.38 | 0.09 | 5.7607863425422E-180 | 1.9410393502562E-175 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | SH3KBP1 | 30011 | 13867 | 0.58 | 0.38 | 0.12 | 1.2236237787642E-125 | 4.1228779601682E-121 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | TSPAN12 | 23554 | 21641 | 0.58 | 0.61 | 0.34 | 9.8816003044168E-84 | 3.3295064065702E-79 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | DLK1 | 8788 | 2907 | 0.57 | 0.12 | 0.04 | 1.8604501864351E-37 | 6.2686008581744E-33 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | SYTL2 | 54843 | 15585 | 0.57 | 0.23 | 0.07 | 3.3370368281824E-68 | 1.1243811888878E-63 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | LAMP5 | 24141 | 16097 | 0.57 | 0.21 | 0.05 | 3.3216732038603E-87 | 1.1192045693087E-82 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | OLFM3 | 118427 | 17990 | 0.57 | 0.35 | 0.15 | 6.8446834554527E-57 | 2.3062476434802E-52 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | EMID1 | 129080 | 18036 | 0.56 | 0.47 | 0.21 | 9.7135941652954E-91 | 3.2728984180546E-86 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | MAOB | 4129 | 6834 | 0.54 | 0.28 | 0.06 | 3.405902074635E-148 | 1.1475846450275E-143 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | PLAT | 5327 | 9051 | 0.54 | 0.41 | 0.14 | 1.0791249893871E-115 | 3.6360037392409E-111 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | LHX1 | 3975 | 6593 | 0.54 | 0.44 | 0.23 | 7.4482216909218E-58 | 2.5096038165392E-53 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | MEST | 4232 | 7028 | 0.53 | 0.87 | 0.78 | 1.3472263628159E-50 | 4.539344506872E-46 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | WDR86 | 349136 | 28020 | 0.51 | 0.31 | 0.09 | 1.3741870282249E-117 | 4.6301857729009E-113 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | KLK6 | 5653 | 6367 | 0.51 | 0.54 | 0.26 | 6.4270817095175E-82 | 2.1655409112048E-77 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | ERP27 | 121506 | 26495 | 0.51 | 0.21 | 0.03 | 2.3511051618532E-156 | 7.9218137323482E-152 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | FBXO17 | 115290 | 18754 | 0.51 | 0.63 | 0.41 | 1.0722302004542E-65 | 3.6127724374103E-61 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | ID1 | 3397 | 5360 | 0.51 | 0.9 | 0.67 | 5.2654791499993E-94 | 1.7741505448008E-89 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | ID3 | 3399 | 5362 | 0.5 | 0.96 | 0.84 | 1.0008393747055E-86 | 3.3722281891328E-82 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | IFITM3 | 10410 | 5414 | 0.49 | 0.76 | 0.68 | 6.2868232377467E-32 | 2.1182822217264E-27 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | COL18A1 | 80781 | 2195 | 0.49 | 0.55 | 0.37 | 5.3861382346946E-47 | 1.814805416798E-42 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | SULF1 | 23213 | 20391 | 0.48 | 0.29 | 0.09 | 9.6390632776365E-87 | 3.2477859807668E-82 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | BMP7 | 655 | 1074 | 0.47 | 0.49 | 0.25 | 2.3227942937131E-67 | 7.8264230932368E-63 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | APP | 351 | 620 | 0.47 | 0.81 | 0.63 | 7.634032284681E-71 | 2.5722108380004E-66 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | GLIPR2 | 152007 | 18007 | 0.47 | 0.4 | 0.19 | 9.2672900116899E-64 | 3.1225206965388E-59 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | SERINC5 | 256987 | 18825 | 0.47 | 0.37 | 0.17 | 1.1759084844755E-56 | 3.9621060475916E-52 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | GRB14 | 2888 | 4565 | 0.47 | 0.28 | 0.08 | 4.8617700062056E-95 | 1.6381247858909E-90 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | MGST1 | 4257 | 7061 | 0.46 | 0.38 | 0.19 | 8.1830957092234E-53 | 2.7572122682657E-48 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | KRT8 | 3856 | 6446 | 0.46 | 0.37 | 0.24 | 7.8405542782154E-23 | 2.6417963585019E-18 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | CAV2 | 858 | 1528 | 0.46 | 0.22 | 0.05 | 7.1864269179625E-93 | 2.4213946857383E-88 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | BCAM | 4059 | 6722 | 0.46 | 0.72 | 0.47 | 1.6966776413894E-68 | 5.7167856448975E-64 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | CYYR1 | 116159 | 16274 | 0.45 | 0.39 | 0.17 | 4.2386980512604E-74 | 1.4281869213917E-69 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | COL13A1 | 1305 | 2190 | 0.45 | 0.29 | 0.13 | 7.9219999093897E-48 | 2.6692386494697E-43 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | CCND1 | 595 | 1582 | 0.45 | 0.52 | 0.32 | 2.6557840467708E-36 | 8.9483987671897E-32 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | OSR2 | 116039 | 15830 | 0.45 | 0.31 | 0.15 | 1.1577698701659E-43 | 3.9009898005369E-39 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | CCDC198 | 55195 | 20189 | 0.45 | 0.34 | 0.15 | 4.6787581068938E-57 | 1.5764607565368E-52 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | APELA | 100506013 | 48925 | 0.44 | 0.21 | 0.04 | 3.9147616971742E-123 | 1.3190398062459E-118 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | PLOD2 | 5352 | 9082 | 0.44 | 0.62 | 0.38 | 5.0743542947086E-54 | 1.7097529360591E-49 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | BMP4 | 652 | 1071 | 0.44 | 0.4 | 0.2 | 4.0001289470955E-54 | 1.3478034474344E-49 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | LIX1 | 167410 | 18581 | 0.44 | 0.17 | 0.01 | 4.5057274280964E-267 | 1.5181597996228E-262 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | PDGFD | 80310 | 30620 | 0.44 | 0.24 | 0.05 | 1.0779092523062E-129 | 3.6319074347205E-125 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | GRIN2A | 2903 | 4585 | 0.44 | 0.21 | 0.05 | 2.0287722345745E-80 | 6.8357451671755E-76 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | RHOBTB3 | 22836 | 18757 | 0.44 | 0.53 | 0.31 | 5.2549676730631E-58 | 1.7706088077619E-53 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | CLDN1 | 9076 | 2032 | 0.43 | 0.26 | 0.07 | 1.7534792127315E-87 | 5.9081728593776E-83 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | DCDC2 | 51473 | 18141 | 0.43 | 0.4 | 0.21 | 5.5030366287193E-46 | 1.8541931616807E-41 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | HSPA2 | 3306 | 5235 | 0.43 | 0.27 | 0.13 | 7.4295131685738E-37 | 2.5033001670193E-32 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | PPA1 | 5464 | 9226 | 0.43 | 0.65 | 0.46 | 1.0300090132331E-50 | 3.4705123691875E-46 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | NRGN | 4900 | 8000 | 0.42 | 0.23 | 0.05 | 4.7246140360352E-114 | 1.5919114533017E-109 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | HES4 | 57801 | 24149 | 0.42 | 0.72 | 0.49 | 1.8135790949673E-55 | 6.1106734025829E-51 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | IGFBP2 | 3485 | 5471 | 0.42 | 0.64 | 0.47 | 1.984222836931E-33 | 6.6856404267554E-29 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | BEX1 | 55859 | 1036 | 0.42 | 0.51 | 0.31 | 3.3588557779378E-44 | 1.1317328658184E-39 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | CRTAC1 | 55118 | 14882 | 0.41 | 0.19 | 0.05 | 5.1146131397008E-60 | 1.7233177512908E-55 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | KIF12 | 113220 | 21495 | 0.41 | 0.36 | 0.17 | 1.7542818826554E-55 | 5.9108773754192E-51 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | KAAG1 | 353219 | 21031 | 0.41 | 0.16 | 0.02 | 2.4444965996957E-132 | 8.2364868430147E-128 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | GPC3 | 2719 | 4451 | 0.41 | 0.94 | 0.77 | 9.4692790705174E-42 | 3.1905788900201E-37 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | ID4 | 3400 | 5363 | 0.4 | 0.71 | 0.55 | 2.1425357219801E-35 | 7.2190598616398E-31 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | KREMEN2 | 79412 | 18797 | 0.4 | 0.21 | 0.05 | 9.7117258495568E-92 | 3.2722689077497E-87 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | ALDH1A1 | 216 | 402 | 0.38 | 0.32 | 0.15 | 8.6448384434596E-46 | 2.9127918651393E-41 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | RGS10 | 6001 | 9992 | 0.38 | 0.39 | 0.19 | 3.6897460430612E-55 | 1.243223031749E-50 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | ANK3 | 288 | 494 | 0.38 | 0.32 | 0.15 | 2.0252450254952E-44 | 6.8238605889036E-40 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | CTTNBP2 | 83992 | 15679 | 0.37 | 0.39 | 0.18 | 1.4196849041728E-55 | 4.78348631612E-51 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | DCXR | 51181 | 18985 | 0.37 | 0.45 | 0.32 | 9.4957718513598E-27 | 3.1995053675972E-22 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | CAV1 | 857 | 1527 | 0.37 | 0.16 | 0.02 | 9.0608576851134E-109 | 3.0529653884221E-104 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | CREG1 | 8804 | 2351 | 0.36 | 0.47 | 0.29 | 6.7209797811907E-40 | 2.2645669274744E-35 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | PLPP3 | 8613 | 9229 | 0.36 | 0.41 | 0.23 | 4.8724912283516E-37 | 1.6417371944808E-32 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | SLC16A1 | 6566 | 10922 | 0.36 | 0.4 | 0.24 | 6.3580521912186E-33 | 2.1422821053092E-28 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | APEX1 | 328 | 587 | 0.36 | 0.83 | 0.65 | 1.1852550761577E-50 | 3.9935984536056E-46 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | CLEC18A | 348174 | 30388 | 0.36 | 0.26 | 0.1 | 7.2925384085313E-54 | 2.4571478913705E-49 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | TTYH1 | 57348 | 13476 | 0.35 | 0.19 | 0.05 | 5.3677975340227E-61 | 1.8086257011136E-56 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | RBP1 | 5947 | 9919 | 0.35 | 0.77 | 0.53 | 2.7201348102718E-45 | 9.1652222297299E-41 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | KRT18 | 3875 | 6430 | 0.35 | 0.51 | 0.34 | 1.0843699477689E-30 | 3.6536761020124E-26 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | ZNF770 | 54989 | 26061 | 0.35 | 0.37 | 0.2 | 2.3677167521619E-39 | 7.9777848247342E-35 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | NTN4 | 59277 | 13658 | 0.34 | 0.16 | 0.06 | 2.4723825524674E-32 | 8.3304457722837E-28 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | CCNI | 10983 | 1595 | 0.34 | 0.97 | 0.91 | 1.2856897968771E-79 | 4.3320032015976E-75 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | NRP2 | 8828 | 8005 | 0.34 | 0.34 | 0.16 | 1.6615067592587E-45 | 5.5982808746464E-41 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | WSCD2 | 9671 | 29117 | 0.34 | 0.15 | 0.01 | 2.3317110512176E-194 | 7.8564672159724E-190 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | AJUBA | 84962 | 20250 | 0.33 | 0.37 | 0.21 | 4.7067130697139E-32 | 1.5858799017094E-27 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | EIF3A | 8661 | 3271 | 0.32 | 0.74 | 0.57 | 1.2403110725587E-39 | 4.1791041278792E-35 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | FBLN2 | 2199 | 3601 | 0.32 | 0.19 | 0.08 | 1.8029268776039E-35 | 6.0747818213985E-31 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | RPL5 | 6125 | 10360 | 0.32 | 1 | 0.99 | 1.7790907495939E-119 | 5.9944683716819E-115 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | CTSB | 1508 | 2527 | 0.32 | 0.58 | 0.43 | 4.2920361717846E-29 | 1.4461586677211E-24 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | PAX2 | 5076 | 8616 | 0.32 | 0.52 | 0.34 | 1.8053731580502E-35 | 6.0830243187342E-31 |
| 70 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | combined | EPS8L1 | 54869 | 21295 | 0.32 | 0.2 | 0.05 | 1.4992837342558E-71 | 5.0516866142017E-67 |