Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: combined
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 70 | 14 | Prolif | Proliferating cells | combined | UBE2C | 11065 | 15937 | 1.07 | 0.32 | 0.12 | 2.5560834034228E-9 | 8.6124674194928E-5 |
| 70 | 14 | Prolif | Proliferating cells | combined | MIF | 4282 | 7097 | 1.06 | 0.81 | 0.44 | 4.9413834996234E-27 | 1.6649497563631E-22 |
| 70 | 14 | Prolif | Proliferating cells | combined | TYMS | 7298 | 12441 | 1.04 | 0.54 | 0.22 | 3.8398102726145E-17 | 1.2937856732548E-12 |
| 70 | 14 | Prolif | Proliferating cells | combined | PCLAF | 9768 | 28961 | 1.01 | 0.6 | 0.26 | 3.2236675612105E-17 | 1.0861825480743E-12 |
| 70 | 14 | Prolif | Proliferating cells | combined | TUBA1B | 10376 | 18809 | 0.98 | 0.88 | 0.82 | 3.7331605330257E-15 | 1.2578511099977E-10 |
| 70 | 14 | Prolif | Proliferating cells | combined | HMGB2 | 3148 | 5000 | 0.95 | 0.68 | 0.47 | 2.0980411224363E-10 | 7.069139757937E-6 |
| 70 | 14 | Prolif | Proliferating cells | combined | H2AFZ | 3015 | 4741 | 0.95 | 0.88 | 0.82 | 5.2159404397128E-15 | 1.7574589717568E-10 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPL39 | 6170 | 10350 | 0.95 | 1 | 0.94 | 3.2146828253558E-41 | 1.0831552311754E-36 |
| 70 | 14 | Prolif | Proliferating cells | combined | TMSB15A | 11013 | 30744 | 0.92 | 0.57 | 0.28 | 1.4682107333517E-14 | 4.9469892449552E-10 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPL35 | 11224 | 10344 | 0.9 | 1 | 0.94 | 1.2420214542874E-40 | 4.1848670880761E-36 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPS17 | 6218 | 10397 | 0.9 | 1 | 0.96 | 3.2631740464334E-43 | 1.0994938632053E-38 |
| 70 | 14 | Prolif | Proliferating cells | combined | RANBP1 | 5902 | 9847 | 0.88 | 0.85 | 0.67 | 2.9930872045006E-19 | 1.0084908026844E-14 |
| 70 | 14 | Prolif | Proliferating cells | combined | SNRPD2 | 6633 | 11159 | 0.88 | 0.89 | 0.71 | 4.4132215185063E-24 | 1.4869908584455E-19 |
| 70 | 14 | Prolif | Proliferating cells | combined | UBE2T | 29089 | 25009 | 0.87 | 0.43 | 0.15 | 9.9650236203282E-17 | 3.3576150586334E-12 |
| 70 | 14 | Prolif | Proliferating cells | combined | MAD2L1 | 4085 | 6763 | 0.86 | 0.48 | 0.2 | 3.4008043098947E-14 | 1.1458670041759E-9 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPL37 | 6167 | 10347 | 0.85 | 1 | 0.88 | 3.1658197070056E-35 | 1.0666912920785E-30 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPS15A | 6210 | 10389 | 0.85 | 1 | 0.98 | 2.5455024597557E-40 | 8.5768159879008E-36 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPS24 | 6229 | 10411 | 0.84 | 1 | 0.96 | 2.0001116416006E-35 | 6.739176165209E-31 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPLP2 | 6181 | 10377 | 0.84 | 1 | 0.96 | 8.7236519478975E-39 | 2.9393472873246E-34 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPL36 | 25873 | 13631 | 0.83 | 0.97 | 0.85 | 8.1837332008501E-26 | 2.7574270646944E-21 |
| 70 | 14 | Prolif | Proliferating cells | combined | PTTG1 | 9232 | 9690 | 0.83 | 0.48 | 0.23 | 1.0560656867809E-10 | 3.5583077250397E-6 |
| 70 | 14 | Prolif | Proliferating cells | combined | PCNA | 5111 | 8729 | 0.82 | 0.52 | 0.32 | 2.1773129234311E-8 | 0.00073362381642088 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPL31 | 6160 | 10334 | 0.82 | 1 | 0.96 | 6.1704066639186E-37 | 2.0790568213407E-32 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPS27 | 6232 | 10416 | 0.81 | 1 | 0.97 | 6.9127663635615E-33 | 2.3291874985384E-28 |
| 70 | 14 | Prolif | Proliferating cells | combined | CDK1 | 983 | 1722 | 0.81 | 0.35 | 0.11 | 1.9194630602933E-13 | 6.4674388353521E-9 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPS15 | 6209 | 10388 | 0.81 | 1 | 0.97 | 8.100023875225E-38 | 2.7292220445183E-33 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPL32 | 6161 | 10336 | 0.81 | 1 | 0.98 | 2.5119327352093E-42 | 8.4637061580142E-38 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPS14 | 6208 | 10387 | 0.8 | 1 | 0.99 | 1.5915789950437E-41 | 5.3626662659003E-37 |
| 70 | 14 | Prolif | Proliferating cells | combined | SNRPD1 | 6632 | 11158 | 0.79 | 0.8 | 0.56 | 5.5846058269532E-17 | 1.8816770873336E-12 |
| 70 | 14 | Prolif | Proliferating cells | combined | POLR2I | 5438 | 9196 | 0.79 | 0.55 | 0.34 | 1.0528891613791E-10 | 3.5476047403506E-6 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPL18A | 6142 | 10311 | 0.79 | 1 | 0.98 | 1.7958678195377E-41 | 6.0509970311504E-37 |
| 70 | 14 | Prolif | Proliferating cells | combined | TMSB10 | 9168 | 11879 | 0.79 | 0.98 | 0.94 | 1.7709039127045E-31 | 5.9668836434667E-27 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPL22 | 6146 | 10315 | 0.78 | 1 | 0.94 | 6.9579318090897E-32 | 2.3444055437547E-27 |
| 70 | 14 | Prolif | Proliferating cells | combined | LSM3 | 27258 | 17874 | 0.78 | 0.7 | 0.45 | 5.5249676314039E-16 | 1.8615825937252E-11 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPL28 | 6158 | 10330 | 0.77 | 0.98 | 0.92 | 6.6277821832827E-31 | 2.2331649288353E-26 |
| 70 | 14 | Prolif | Proliferating cells | combined | UBA52 | 7311 | 12458 | 0.76 | 0.98 | 0.9 | 1.4651184221441E-25 | 4.9365700115724E-21 |
| 70 | 14 | Prolif | Proliferating cells | combined | TUBB | 203068 | 20778 | 0.75 | 0.95 | 0.9 | 2.2915403072099E-16 | 7.7211159111131E-12 |
| 70 | 14 | Prolif | Proliferating cells | combined | SPC25 | 57405 | 24031 | 0.75 | 0.29 | 0.06 | 4.0363402271576E-19 | 1.3600044761385E-14 |
| 70 | 14 | Prolif | Proliferating cells | combined | HMGN2 | 3151 | 4986 | 0.75 | 0.95 | 0.91 | 3.5023591195219E-18 | 1.1800848817317E-13 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPL26 | 6154 | 10327 | 0.74 | 1 | 0.98 | 1.4770808477119E-39 | 4.9768762082806E-35 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPA3 | 6119 | 10291 | 0.74 | 0.48 | 0.3 | 5.710359175584E-8 | 0.0019240484206213 |
| 70 | 14 | Prolif | Proliferating cells | combined | HIST1H4C | 8364 | 4787 | 0.74 | 0.42 | 0.23 | 1.7401052209643E-7 | 0.005863110531517 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPS3A | 6189 | 10421 | 0.73 | 1 | 0.99 | 3.3293824555687E-44 | 1.1218021245793E-39 |
| 70 | 14 | Prolif | Proliferating cells | combined | DUT | 1854 | 3078 | 0.73 | 0.74 | 0.57 | 3.2206818258415E-10 | 1.085176534399E-5 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPL34 | 6164 | 10340 | 0.73 | 1 | 0.99 | 9.9052123367238E-35 | 3.3374622447357E-30 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPL21 | 6144 | 10313 | 0.73 | 1 | 0.99 | 9.3972921802753E-40 | 3.166323627222E-35 |
| 70 | 14 | Prolif | Proliferating cells | combined | NUSAP1 | 51203 | 18538 | 0.72 | 0.34 | 0.14 | 1.3675184811514E-8 | 0.00046077167703916 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPL38 | 6169 | 10349 | 0.72 | 0.96 | 0.84 | 6.5814863522149E-22 | 2.2175660115153E-17 |
| 70 | 14 | Prolif | Proliferating cells | combined | SNRPE | 6635 | 11161 | 0.71 | 0.82 | 0.7 | 1.9471545827434E-14 | 6.5607426510956E-10 |
| 70 | 14 | Prolif | Proliferating cells | combined | STMN1 | 3925 | 6510 | 0.71 | 1 | 0.95 | 2.1983795283336E-16 | 7.4072199827672E-12 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPS12 | 6206 | 10385 | 0.71 | 1 | 0.97 | 1.3100840718916E-30 | 4.4141972718317E-26 |
| 70 | 14 | Prolif | Proliferating cells | combined | MZT2B | 80097 | 25886 | 0.7 | 0.84 | 0.63 | 1.199476730392E-13 | 4.041516895383E-9 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPS27A | 6233 | 10417 | 0.7 | 1 | 0.99 | 1.8389811185084E-34 | 6.1962629807022E-30 |
| 70 | 14 | Prolif | Proliferating cells | combined | HMGB1 | 3146 | 4983 | 0.7 | 0.96 | 0.96 | 8.1713040599381E-16 | 2.7532391899555E-11 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPS28 | 6234 | 10418 | 0.69 | 1 | 0.93 | 3.3173761291139E-26 | 1.1177567129436E-21 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPL23A | 6147 | 10317 | 0.69 | 1 | 0.98 | 7.8382097896866E-33 | 2.641006406537E-28 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPL27 | 6155 | 10328 | 0.69 | 1 | 0.93 | 4.8913203122362E-28 | 1.6480814660049E-23 |
| 70 | 14 | Prolif | Proliferating cells | combined | CALCA | 796 | 1437 | 0.69 | 0.23 | 0.07 | 1.7259116646593E-8 | 0.00058152867629032 |
| 70 | 14 | Prolif | Proliferating cells | combined | SNRPF | 6636 | 11162 | 0.69 | 0.78 | 0.54 | 1.2092359399789E-14 | 4.0743995761649E-10 |
| 70 | 14 | Prolif | Proliferating cells | combined | RBP1 | 5947 | 9919 | 0.69 | 0.8 | 0.54 | 3.0678434157319E-12 | 1.0336791604967E-7 |
| 70 | 14 | Prolif | Proliferating cells | combined | CKS1B | 1163 | 19083 | 0.68 | 0.52 | 0.34 | 5.17617062187E-8 | 0.0017440589293329 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPL27A | 6157 | 10329 | 0.68 | 1 | 0.96 | 2.194028134877E-31 | 7.3925583976546E-27 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPS19 | 6223 | 10402 | 0.68 | 1 | 0.98 | 4.0946489975821E-36 | 1.3796510332453E-31 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPS23 | 6228 | 10410 | 0.68 | 1 | 0.98 | 5.6466706969246E-37 | 1.9025892246218E-32 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPLP1 | 6176 | 10372 | 0.66 | 1 | 0.99 | 7.0526060281207E-36 | 2.376305075115E-31 |
| 70 | 14 | Prolif | Proliferating cells | combined | NDUFS5 | 4725 | 7712 | 0.66 | 0.84 | 0.7 | 4.0324274441676E-15 | 1.3586861030379E-10 |
| 70 | 14 | Prolif | Proliferating cells | combined | ATP5F1E | 514 | 838 | 0.66 | 0.95 | 0.8 | 3.8505201378302E-19 | 1.2973942552405E-14 |
| 70 | 14 | Prolif | Proliferating cells | combined | SEC61G | 23480 | 18277 | 0.66 | 0.76 | 0.59 | 1.8416692817767E-14 | 6.2053204780184E-10 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPS4Y1 | 6192 | 10425 | 0.66 | 0.89 | 0.59 | 7.0725188823099E-15 | 2.3830145122055E-10 |
| 70 | 14 | Prolif | Proliferating cells | combined | TK1 | 7083 | 11830 | 0.65 | 0.32 | 0.13 | 2.6790208898806E-9 | 9.0266929863638E-5 |
| 70 | 14 | Prolif | Proliferating cells | combined | UQCRQ | 27089 | 29594 | 0.65 | 0.78 | 0.65 | 4.7944944065796E-12 | 1.6154569453529E-7 |
| 70 | 14 | Prolif | Proliferating cells | combined | UQCRB | 7381 | 12582 | 0.65 | 0.84 | 0.65 | 2.5990126097942E-14 | 8.7571130874405E-10 |
| 70 | 14 | Prolif | Proliferating cells | combined | FAU | 2197 | 3597 | 0.65 | 1 | 0.96 | 8.8505707765832E-27 | 2.9821113174619E-22 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPL12 | 6136 | 10302 | 0.65 | 1 | 0.98 | 2.1189408551806E-27 | 7.1395593174456E-23 |
| 70 | 14 | Prolif | Proliferating cells | combined | TMEM258 | 746 | 1164 | 0.64 | 0.75 | 0.57 | 6.4950331419002E-12 | 2.1884364668319E-7 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPS18 | 6222 | 10401 | 0.64 | 1 | 0.99 | 1.2583475251638E-32 | 4.239876151287E-28 |
| 70 | 14 | Prolif | Proliferating cells | combined | PTMA | 5757 | 9623 | 0.64 | 1 | 1 | 3.9300746156608E-31 | 1.3241993410008E-26 |
| 70 | 14 | Prolif | Proliferating cells | combined | RBX1 | 9978 | 9928 | 0.64 | 0.72 | 0.56 | 1.0626728363028E-10 | 3.5805698546386E-6 |
| 70 | 14 | Prolif | Proliferating cells | combined | ATP5ME | 521 | 846 | 0.64 | 0.6 | 0.45 | 2.1009808541979E-8 | 0.00070790448901343 |
| 70 | 14 | Prolif | Proliferating cells | combined | CKS2 | 1164 | 2000 | 0.64 | 0.54 | 0.35 | 2.1166877706101E-7 | 0.0071319677742935 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPL29 | 6159 | 10331 | 0.63 | 1 | 0.98 | 4.4306104860503E-33 | 1.4928498971698E-28 |
| 70 | 14 | Prolif | Proliferating cells | combined | TXN | 7295 | 12435 | 0.63 | 0.82 | 0.72 | 1.9834179682808E-11 | 6.6829285023254E-7 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPL41 | 6171 | 10354 | 0.62 | 1 | 0.99 | 7.6144912275948E-32 | 2.5656266742258E-27 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPS25 | 6230 | 10413 | 0.62 | 1 | 0.96 | 5.1939165487045E-24 | 1.7500382419205E-19 |
| 70 | 14 | Prolif | Proliferating cells | combined | EEF1B2 | 1933 | 3208 | 0.62 | 0.94 | 0.82 | 3.5089915158599E-18 | 1.1823196013538E-13 |
| 70 | 14 | Prolif | Proliferating cells | combined | ATP5MF | 9551 | 848 | 0.61 | 0.55 | 0.42 | 1.1489979342373E-6 | 0.03 |
| 70 | 14 | Prolif | Proliferating cells | combined | SNRPG | 6637 | 11163 | 0.61 | 0.75 | 0.58 | 4.6749172707618E-12 | 1.5751666252105E-7 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPS20 | 6224 | 10405 | 0.61 | 1 | 0.96 | 7.5847832506144E-26 | 2.555616868462E-21 |
| 70 | 14 | Prolif | Proliferating cells | combined | GSTO1 | 9446 | 13312 | 0.61 | 0.55 | 0.34 | 3.2909211298664E-10 | 1.1088429654972E-5 |
| 70 | 14 | Prolif | Proliferating cells | combined | LSM5 | 23658 | 17162 | 0.61 | 0.67 | 0.47 | 3.8371611707874E-10 | 1.2928930848851E-5 |
| 70 | 14 | Prolif | Proliferating cells | combined | UQCRH | 7388 | 12590 | 0.6 | 0.92 | 0.8 | 9.2893675560433E-15 | 3.1299595043332E-10 |
| 70 | 14 | Prolif | Proliferating cells | combined | PRDX2 | 7001 | 9353 | 0.6 | 0.9 | 0.78 | 2.6782649685494E-15 | 9.0241459850304E-11 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPL37A | 6168 | 10348 | 0.6 | 1 | 0.95 | 2.3276965715416E-24 | 7.8429408281522E-20 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPL35A | 6165 | 10345 | 0.6 | 1 | 0.98 | 8.3225434919564E-27 | 2.8041978041798E-22 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPS26 | 6231 | 10414 | 0.59 | 0.94 | 0.79 | 4.0312048316199E-15 | 1.358274155966E-10 |
| 70 | 14 | Prolif | Proliferating cells | combined | LDHA | 3939 | 6535 | 0.59 | 0.65 | 0.51 | 1.7044680199901E-7 | 0.0057430345465546 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPL9 | 6133 | 10369 | 0.59 | 1 | 0.99 | 6.859184957925E-30 | 2.3111337797233E-25 |
| 70 | 14 | Prolif | Proliferating cells | combined | RPS5 | 6193 | 10426 | 0.58 | 1 | 0.98 | 2.7262448442472E-31 | 9.1858093782066E-27 |
| 70 | 14 | Prolif | Proliferating cells | combined | ATP5MD | 84833 | 30889 | 0.58 | 0.6 | 0.47 | 1.703899498992E-7 | 0.0057411189719038 |
| 70 | 14 | Prolif | Proliferating cells | combined | BIRC5 | 332 | 593 | 0.58 | 0.29 | 0.12 | 3.5812408801332E-7 | 0.01 |