Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: combined
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
70 | 14 | Prolif | Proliferating cells | combined | UBE2C | 11065 | 15937 | 1.07 | 0.32 | 0.12 | 2.5560834034228e-09 | 8.61246741949279e-05 |
70 | 14 | Prolif | Proliferating cells | combined | MIF | 4282 | 7097 | 1.06 | 0.81 | 0.44 | 4.94138349962336e-27 | 1.6649497563631e-22 |
70 | 14 | Prolif | Proliferating cells | combined | TYMS | 7298 | 12441 | 1.04 | 0.54 | 0.22 | 3.83981027261455e-17 | 1.29378567325475e-12 |
70 | 14 | Prolif | Proliferating cells | combined | PCLAF | 9768 | 28961 | 1.01 | 0.6 | 0.26 | 3.22366756121055e-17 | 1.08618254807428e-12 |
70 | 14 | Prolif | Proliferating cells | combined | TUBA1B | 10376 | 18809 | 0.98 | 0.88 | 0.82 | 3.73316053302568e-15 | 1.25785110999767e-10 |
70 | 14 | Prolif | Proliferating cells | combined | HMGB2 | 3148 | 5000 | 0.95 | 0.68 | 0.47 | 2.09804112243635e-10 | 7.06913975793705e-06 |
70 | 14 | Prolif | Proliferating cells | combined | H2AFZ | 3015 | 4741 | 0.95 | 0.88 | 0.82 | 5.21594043971277e-15 | 1.75745897175682e-10 |
70 | 14 | Prolif | Proliferating cells | combined | RPL39 | 6170 | 10350 | 0.95 | 1 | 0.94 | 3.21468282535577e-41 | 1.08315523117537e-36 |
70 | 14 | Prolif | Proliferating cells | combined | TMSB15A | 11013 | 30744 | 0.92 | 0.57 | 0.28 | 1.46821073335169e-14 | 4.9469892449552e-10 |
70 | 14 | Prolif | Proliferating cells | combined | RPL35 | 11224 | 10344 | 0.9 | 1 | 0.94 | 1.24202145428744e-40 | 4.18486708807611e-36 |
70 | 14 | Prolif | Proliferating cells | combined | RPS17 | 6218 | 10397 | 0.9 | 1 | 0.96 | 3.26317404643344e-43 | 1.09949386320528e-38 |
70 | 14 | Prolif | Proliferating cells | combined | RANBP1 | 5902 | 9847 | 0.88 | 0.85 | 0.67 | 2.99308720450058e-19 | 1.00849080268442e-14 |
70 | 14 | Prolif | Proliferating cells | combined | SNRPD2 | 6633 | 11159 | 0.88 | 0.89 | 0.71 | 4.41322151850626e-24 | 1.4869908584455e-19 |
70 | 14 | Prolif | Proliferating cells | combined | UBE2T | 29089 | 25009 | 0.87 | 0.43 | 0.15 | 9.96502362032824e-17 | 3.3576150586334e-12 |
70 | 14 | Prolif | Proliferating cells | combined | MAD2L1 | 4085 | 6763 | 0.86 | 0.48 | 0.2 | 3.40080430989473e-14 | 1.14586700417593e-09 |
70 | 14 | Prolif | Proliferating cells | combined | RPL37 | 6167 | 10347 | 0.85 | 1 | 0.88 | 3.16581970700555e-35 | 1.06669129207845e-30 |
70 | 14 | Prolif | Proliferating cells | combined | RPS15A | 6210 | 10389 | 0.85 | 1 | 0.98 | 2.54550245975568e-40 | 8.57681598790078e-36 |
70 | 14 | Prolif | Proliferating cells | combined | RPS24 | 6229 | 10411 | 0.84 | 1 | 0.96 | 2.00011164160057e-35 | 6.73917616520897e-31 |
70 | 14 | Prolif | Proliferating cells | combined | RPLP2 | 6181 | 10377 | 0.84 | 1 | 0.96 | 8.72365194789748e-39 | 2.93934728732458e-34 |
70 | 14 | Prolif | Proliferating cells | combined | RPL36 | 25873 | 13631 | 0.83 | 0.97 | 0.85 | 8.18373320085013e-26 | 2.75742706469444e-21 |
70 | 14 | Prolif | Proliferating cells | combined | PTTG1 | 9232 | 9690 | 0.83 | 0.48 | 0.23 | 1.05606568678094e-10 | 3.55830772503971e-06 |
70 | 14 | Prolif | Proliferating cells | combined | PCNA | 5111 | 8729 | 0.82 | 0.52 | 0.32 | 2.17731292343112e-08 | 0.00073362381642088 |
70 | 14 | Prolif | Proliferating cells | combined | RPL31 | 6160 | 10334 | 0.82 | 1 | 0.96 | 6.17040666391857e-37 | 2.07905682134072e-32 |
70 | 14 | Prolif | Proliferating cells | combined | RPS27 | 6232 | 10416 | 0.81 | 1 | 0.97 | 6.91276636356147e-33 | 2.3291874985384e-28 |
70 | 14 | Prolif | Proliferating cells | combined | CDK1 | 983 | 1722 | 0.81 | 0.35 | 0.11 | 1.91946306029325e-13 | 6.46743883535208e-09 |
70 | 14 | Prolif | Proliferating cells | combined | RPS15 | 6209 | 10388 | 0.81 | 1 | 0.97 | 8.10002387522496e-38 | 2.7292220445183e-33 |
70 | 14 | Prolif | Proliferating cells | combined | RPL32 | 6161 | 10336 | 0.81 | 1 | 0.98 | 2.51193273520929e-42 | 8.4637061580142e-38 |
70 | 14 | Prolif | Proliferating cells | combined | RPS14 | 6208 | 10387 | 0.8 | 1 | 0.99 | 1.59157899504371e-41 | 5.36266626590029e-37 |
70 | 14 | Prolif | Proliferating cells | combined | SNRPD1 | 6632 | 11158 | 0.79 | 0.8 | 0.56 | 5.58460582695319e-17 | 1.88167708733361e-12 |
70 | 14 | Prolif | Proliferating cells | combined | POLR2I | 5438 | 9196 | 0.79 | 0.55 | 0.34 | 1.05288916137905e-10 | 3.54760474035056e-06 |
70 | 14 | Prolif | Proliferating cells | combined | RPL18A | 6142 | 10311 | 0.79 | 1 | 0.98 | 1.79586781953772e-41 | 6.05099703115039e-37 |
70 | 14 | Prolif | Proliferating cells | combined | TMSB10 | 9168 | 11879 | 0.79 | 0.98 | 0.94 | 1.77090391270454e-31 | 5.96688364346667e-27 |
70 | 14 | Prolif | Proliferating cells | combined | RPL22 | 6146 | 10315 | 0.78 | 1 | 0.94 | 6.95793180908969e-32 | 2.34440554375468e-27 |
70 | 14 | Prolif | Proliferating cells | combined | LSM3 | 27258 | 17874 | 0.78 | 0.7 | 0.45 | 5.52496763140392e-16 | 1.86158259372524e-11 |
70 | 14 | Prolif | Proliferating cells | combined | RPL28 | 6158 | 10330 | 0.77 | 0.98 | 0.92 | 6.6277821832827e-31 | 2.23316492883527e-26 |
70 | 14 | Prolif | Proliferating cells | combined | UBA52 | 7311 | 12458 | 0.76 | 0.98 | 0.9 | 1.46511842214413e-25 | 4.93657001157244e-21 |
70 | 14 | Prolif | Proliferating cells | combined | TUBB | 203068 | 20778 | 0.75 | 0.95 | 0.9 | 2.2915403072099e-16 | 7.72111591111305e-12 |
70 | 14 | Prolif | Proliferating cells | combined | SPC25 | 57405 | 24031 | 0.75 | 0.29 | 0.06 | 4.03634022715765e-19 | 1.3600044761385e-14 |
70 | 14 | Prolif | Proliferating cells | combined | HMGN2 | 3151 | 4986 | 0.75 | 0.95 | 0.91 | 3.50235911952188e-18 | 1.1800848817317e-13 |
70 | 14 | Prolif | Proliferating cells | combined | RPL26 | 6154 | 10327 | 0.74 | 1 | 0.98 | 1.47708084771194e-39 | 4.97687620828062e-35 |
70 | 14 | Prolif | Proliferating cells | combined | RPA3 | 6119 | 10291 | 0.74 | 0.48 | 0.3 | 5.71035917558396e-08 | 0.00192404842062126 |
70 | 14 | Prolif | Proliferating cells | combined | HIST1H4C | 8364 | 4787 | 0.74 | 0.42 | 0.23 | 1.74010522096425e-07 | 0.00586311053151696 |
70 | 14 | Prolif | Proliferating cells | combined | RPS3A | 6189 | 10421 | 0.73 | 1 | 0.99 | 3.32938245556867e-44 | 1.12180212457931e-39 |
70 | 14 | Prolif | Proliferating cells | combined | DUT | 1854 | 3078 | 0.73 | 0.74 | 0.57 | 3.2206818258415e-10 | 1.08517653439904e-05 |
70 | 14 | Prolif | Proliferating cells | combined | RPL34 | 6164 | 10340 | 0.73 | 1 | 0.99 | 9.90521233672376e-35 | 3.3374622447357e-30 |
70 | 14 | Prolif | Proliferating cells | combined | RPL21 | 6144 | 10313 | 0.73 | 1 | 0.99 | 9.39729218027535e-40 | 3.16632362722198e-35 |
70 | 14 | Prolif | Proliferating cells | combined | NUSAP1 | 51203 | 18538 | 0.72 | 0.34 | 0.14 | 1.36751848115142e-08 | 0.000460771677039158 |
70 | 14 | Prolif | Proliferating cells | combined | RPL38 | 6169 | 10349 | 0.72 | 0.96 | 0.84 | 6.58148635221492e-22 | 2.21756601151529e-17 |
70 | 14 | Prolif | Proliferating cells | combined | SNRPE | 6635 | 11161 | 0.71 | 0.82 | 0.7 | 1.9471545827434e-14 | 6.5607426510956e-10 |
70 | 14 | Prolif | Proliferating cells | combined | STMN1 | 3925 | 6510 | 0.71 | 1 | 0.95 | 2.19837952833359e-16 | 7.40721998276719e-12 |
70 | 14 | Prolif | Proliferating cells | combined | RPS12 | 6206 | 10385 | 0.71 | 1 | 0.97 | 1.31008407189163e-30 | 4.41419727183167e-26 |
70 | 14 | Prolif | Proliferating cells | combined | MZT2B | 80097 | 25886 | 0.7 | 0.84 | 0.63 | 1.19947673039205e-13 | 4.04151689538296e-09 |
70 | 14 | Prolif | Proliferating cells | combined | RPS27A | 6233 | 10417 | 0.7 | 1 | 0.99 | 1.8389811185084e-34 | 6.19626298070221e-30 |
70 | 14 | Prolif | Proliferating cells | combined | HMGB1 | 3146 | 4983 | 0.7 | 0.96 | 0.96 | 8.17130405993805e-16 | 2.75323918995553e-11 |
70 | 14 | Prolif | Proliferating cells | combined | RPS28 | 6234 | 10418 | 0.69 | 1 | 0.93 | 3.31737612911392e-26 | 1.11775671294364e-21 |
70 | 14 | Prolif | Proliferating cells | combined | RPL23A | 6147 | 10317 | 0.69 | 1 | 0.98 | 7.83820978968664e-33 | 2.64100640653702e-28 |
70 | 14 | Prolif | Proliferating cells | combined | RPL27 | 6155 | 10328 | 0.69 | 1 | 0.93 | 4.89132031223624e-28 | 1.64808146600488e-23 |
70 | 14 | Prolif | Proliferating cells | combined | CALCA | 796 | 1437 | 0.69 | 0.23 | 0.07 | 1.72591166465935e-08 | 0.00058152867629032 |
70 | 14 | Prolif | Proliferating cells | combined | SNRPF | 6636 | 11162 | 0.69 | 0.78 | 0.54 | 1.2092359399789e-14 | 4.07439957616491e-10 |
70 | 14 | Prolif | Proliferating cells | combined | RBP1 | 5947 | 9919 | 0.69 | 0.8 | 0.54 | 3.0678434157319e-12 | 1.03367916049671e-07 |
70 | 14 | Prolif | Proliferating cells | combined | CKS1B | 1163 | 19083 | 0.68 | 0.52 | 0.34 | 5.17617062187003e-08 | 0.00174405892933289 |
70 | 14 | Prolif | Proliferating cells | combined | RPL27A | 6157 | 10329 | 0.68 | 1 | 0.96 | 2.19402813487702e-31 | 7.39255839765462e-27 |
70 | 14 | Prolif | Proliferating cells | combined | RPS19 | 6223 | 10402 | 0.68 | 1 | 0.98 | 4.09464899758215e-36 | 1.37965103324533e-31 |
70 | 14 | Prolif | Proliferating cells | combined | RPS23 | 6228 | 10410 | 0.68 | 1 | 0.98 | 5.64667069692464e-37 | 1.90258922462179e-32 |
70 | 14 | Prolif | Proliferating cells | combined | RPLP1 | 6176 | 10372 | 0.66 | 1 | 0.99 | 7.05260602812072e-36 | 2.37630507511499e-31 |
70 | 14 | Prolif | Proliferating cells | combined | NDUFS5 | 4725 | 7712 | 0.66 | 0.84 | 0.7 | 4.03242744416764e-15 | 1.35868610303785e-10 |
70 | 14 | Prolif | Proliferating cells | combined | ATP5F1E | 514 | 838 | 0.66 | 0.95 | 0.8 | 3.85052013783022e-19 | 1.29739425524051e-14 |
70 | 14 | Prolif | Proliferating cells | combined | SEC61G | 23480 | 18277 | 0.66 | 0.76 | 0.59 | 1.84166928177668e-14 | 6.20532047801836e-10 |
70 | 14 | Prolif | Proliferating cells | combined | RPS4Y1 | 6192 | 10425 | 0.66 | 0.89 | 0.59 | 7.07251888230995e-15 | 2.38301451220551e-10 |
70 | 14 | Prolif | Proliferating cells | combined | TK1 | 7083 | 11830 | 0.65 | 0.32 | 0.13 | 2.67902088988062e-09 | 9.02669298636376e-05 |
70 | 14 | Prolif | Proliferating cells | combined | UQCRQ | 27089 | 29594 | 0.65 | 0.78 | 0.65 | 4.79449440657959e-12 | 1.61545694535293e-07 |
70 | 14 | Prolif | Proliferating cells | combined | UQCRB | 7381 | 12582 | 0.65 | 0.84 | 0.65 | 2.59901260979418e-14 | 8.75711308744051e-10 |
70 | 14 | Prolif | Proliferating cells | combined | FAU | 2197 | 3597 | 0.65 | 1 | 0.96 | 8.85057077658318e-27 | 2.98211131746194e-22 |
70 | 14 | Prolif | Proliferating cells | combined | RPL12 | 6136 | 10302 | 0.65 | 1 | 0.98 | 2.11894085518061e-27 | 7.13955931744556e-23 |
70 | 14 | Prolif | Proliferating cells | combined | TMEM258 | 746 | 1164 | 0.64 | 0.75 | 0.57 | 6.49503314190023e-12 | 2.18843646683186e-07 |
70 | 14 | Prolif | Proliferating cells | combined | RPS18 | 6222 | 10401 | 0.64 | 1 | 0.99 | 1.25834752516383e-32 | 4.23987615128701e-28 |
70 | 14 | Prolif | Proliferating cells | combined | PTMA | 5757 | 9623 | 0.64 | 1 | 1 | 3.93007461566081e-31 | 1.32419934100075e-26 |
70 | 14 | Prolif | Proliferating cells | combined | RBX1 | 9978 | 9928 | 0.64 | 0.72 | 0.56 | 1.0626728363028e-10 | 3.58056985463864e-06 |
70 | 14 | Prolif | Proliferating cells | combined | ATP5ME | 521 | 846 | 0.64 | 0.6 | 0.45 | 2.10098085419786e-08 | 0.000707904489013428 |
70 | 14 | Prolif | Proliferating cells | combined | CKS2 | 1164 | 2000 | 0.64 | 0.54 | 0.35 | 2.11668777061005e-07 | 0.0071319677742935 |
70 | 14 | Prolif | Proliferating cells | combined | RPL29 | 6159 | 10331 | 0.63 | 1 | 0.98 | 4.43061048605031e-33 | 1.49284989716979e-28 |
70 | 14 | Prolif | Proliferating cells | combined | TXN | 7295 | 12435 | 0.63 | 0.82 | 0.72 | 1.98341796828082e-11 | 6.6829285023254e-07 |
70 | 14 | Prolif | Proliferating cells | combined | RPL41 | 6171 | 10354 | 0.62 | 1 | 0.99 | 7.61449122759483e-32 | 2.5656266742258e-27 |
70 | 14 | Prolif | Proliferating cells | combined | RPS25 | 6230 | 10413 | 0.62 | 1 | 0.96 | 5.19391654870455e-24 | 1.75003824192051e-19 |
70 | 14 | Prolif | Proliferating cells | combined | EEF1B2 | 1933 | 3208 | 0.62 | 0.94 | 0.82 | 3.50899151585991e-18 | 1.18231960135384e-13 |
70 | 14 | Prolif | Proliferating cells | combined | ATP5MF | 9551 | 848 | 0.61 | 0.55 | 0.42 | 1.14899793423727e-06 | 0.03 |
70 | 14 | Prolif | Proliferating cells | combined | SNRPG | 6637 | 11163 | 0.61 | 0.75 | 0.58 | 4.67491727076179e-12 | 1.57516662521048e-07 |
70 | 14 | Prolif | Proliferating cells | combined | RPS20 | 6224 | 10405 | 0.61 | 1 | 0.96 | 7.58478325061445e-26 | 2.55561686846203e-21 |
70 | 14 | Prolif | Proliferating cells | combined | GSTO1 | 9446 | 13312 | 0.61 | 0.55 | 0.34 | 3.2909211298664e-10 | 1.10884296549718e-05 |
70 | 14 | Prolif | Proliferating cells | combined | LSM5 | 23658 | 17162 | 0.61 | 0.67 | 0.47 | 3.83716117078742e-10 | 1.29289308488511e-05 |
70 | 14 | Prolif | Proliferating cells | combined | UQCRH | 7388 | 12590 | 0.6 | 0.92 | 0.8 | 9.28936755604334e-15 | 3.12995950433324e-10 |
70 | 14 | Prolif | Proliferating cells | combined | PRDX2 | 7001 | 9353 | 0.6 | 0.9 | 0.78 | 2.67826496854941e-15 | 9.0241459850304e-11 |
70 | 14 | Prolif | Proliferating cells | combined | RPL37A | 6168 | 10348 | 0.6 | 1 | 0.95 | 2.32769657154158e-24 | 7.84294082815219e-20 |
70 | 14 | Prolif | Proliferating cells | combined | RPL35A | 6165 | 10345 | 0.6 | 1 | 0.98 | 8.32254349195642e-27 | 2.8041978041798e-22 |
70 | 14 | Prolif | Proliferating cells | combined | RPS26 | 6231 | 10414 | 0.59 | 0.94 | 0.79 | 4.03120483161987e-15 | 1.358274155966e-10 |
70 | 14 | Prolif | Proliferating cells | combined | LDHA | 3939 | 6535 | 0.59 | 0.65 | 0.51 | 1.70446801999009e-07 | 0.00574303454655462 |
70 | 14 | Prolif | Proliferating cells | combined | RPL9 | 6133 | 10369 | 0.59 | 1 | 0.99 | 6.85918495792503e-30 | 2.31113377972326e-25 |
70 | 14 | Prolif | Proliferating cells | combined | RPS5 | 6193 | 10426 | 0.58 | 1 | 0.98 | 2.72624484424722e-31 | 9.18580937820657e-27 |
70 | 14 | Prolif | Proliferating cells | combined | ATP5MD | 84833 | 30889 | 0.58 | 0.6 | 0.47 | 1.70389949899205e-07 | 0.00574111897190382 |
70 | 14 | Prolif | Proliferating cells | combined | BIRC5 | 332 | 593 | 0.58 | 0.29 | 0.12 | 3.58124088013323e-07 | 0.01 |