Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: combined
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
70 | 13 | Pod | Podocyte | combined | PODXL | 5420 | 9171 | 2.75 | 0.99 | 0.15 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | NPHS2 | 7827 | 13394 | 2.66 | 0.97 | 0.09 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | TPPP3 | 51673 | 24162 | 2.42 | 0.94 | 0.11 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | PTPRO | 5800 | 9678 | 2.35 | 0.93 | 0.07 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | CLIC5 | 53405 | 13517 | 2.31 | 0.93 | 0.08 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | SOST | 50964 | 13771 | 2.24 | 0.89 | 0.09 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | MME | 4311 | 7154 | 2.14 | 0.87 | 0.08 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | MAFB | 9935 | 6408 | 2.13 | 0.99 | 0.29 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | THSD7A | 221981 | 22207 | 2.12 | 0.9 | 0.11 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | AIF1 | 199 | 352 | 2.12 | 0.84 | 0.06 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | MYL9 | 10398 | 15754 | 2.07 | 0.96 | 0.32 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | DDN | 23109 | 24458 | 1.95 | 0.7 | 0.01 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | MPP5 | 64398 | 18669 | 1.94 | 0.88 | 0.13 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | TNNI1 | 7135 | 11945 | 1.94 | 0.77 | 0.13 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | MXRA8 | 54587 | 7542 | 1.91 | 0.97 | 0.3 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | ANXA2 | 302 | 537 | 1.89 | 0.96 | 0.42 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | ST6GALNAC3 | 256435 | 19343 | 1.8 | 0.77 | 0.07 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | PDLIM2 | 64236 | 13992 | 1.78 | 0.85 | 0.18 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | SPARC | 6678 | 11219 | 1.71 | 0.99 | 0.66 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | GADD45A | 1647 | 4095 | 1.69 | 0.92 | 0.39 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | NES | 10763 | 7756 | 1.69 | 0.87 | 0.19 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | SEMA3B | 7869 | 10724 | 1.67 | 0.84 | 0.15 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | WT1 | 7490 | 12796 | 1.67 | 0.97 | 0.41 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | MRGPRF | 116535 | 24828 | 1.65 | 0.7 | 0.03 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | PTH1R | 5745 | 9608 | 1.64 | 0.71 | 0.07 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | TCF21 | 6943 | 11632 | 1.61 | 0.97 | 0.34 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | TNNT2 | 7139 | 11949 | 1.59 | 0.64 | 0.07 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | S100A6 | 6277 | 10496 | 1.58 | 0.93 | 0.33 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | ST3GAL6 | 10402 | 18080 | 1.56 | 0.72 | 0.06 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | CXCL12 | 6387 | 10672 | 1.55 | 0.69 | 0.25 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | SPOCK2 | 9806 | 13564 | 1.54 | 0.78 | 0.2 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | TYRO3 | 7301 | 12446 | 1.53 | 0.74 | 0.15 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | ENPEP | 2028 | 3355 | 1.49 | 0.69 | 0.1 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | TGFBR3 | 7049 | 11774 | 1.49 | 0.69 | 0.07 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | NPHS1 | 4868 | 7908 | 1.47 | 0.74 | 0.08 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | CRB2 | 286204 | 18688 | 1.47 | 0.67 | 0.13 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | ARMH4 | 145407 | 19846 | 1.46 | 0.67 | 0.12 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | BST2 | 684 | 1119 | 1.46 | 0.93 | 0.4 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | SPINT2 | 10653 | 11247 | 1.45 | 0.97 | 0.51 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | VASN | 114990 | 18517 | 1.45 | 0.76 | 0.18 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | CLDN5 | 7122 | 2047 | 1.44 | 0.82 | 0.18 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | TUBB2A | 7280 | 12412 | 1.43 | 0.72 | 0.22 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | CPXM1 | 56265 | 15771 | 1.43 | 0.84 | 0.35 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | RIPOR1 | 79567 | 25836 | 1.43 | 0.65 | 0.06 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | GSN | 2934 | 4620 | 1.4 | 0.75 | 0.15 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | SHISA2 | 387914 | 20366 | 1.4 | 0.66 | 0.19 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | NTNG1 | 22854 | 23319 | 1.38 | 0.54 | 0.01 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | ARHGEF3 | 50650 | 683 | 1.34 | 0.65 | 0.08 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | PLTP | 5360 | 9093 | 1.33 | 0.63 | 0.11 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | ANXA1 | 301 | 533 | 1.3 | 0.3 | 0.02 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | ACTN4 | 81 | 166 | 1.3 | 0.8 | 0.35 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | LOXL1 | 4016 | 6665 | 1.3 | 0.75 | 0.21 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | RETREG1 | 54463 | 25964 | 1.29 | 0.65 | 0.09 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | ITM2B | 9445 | 6174 | 1.29 | 0.99 | 0.92 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | SELENOP | 6414 | 10751 | 1.28 | 0.93 | 0.49 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | KLRB1 | 3820 | 6373 | 1.27 | 0.51 | 0.03 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | CITED2 | 10370 | 1987 | 1.25 | 0.95 | 0.63 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | ADM | 133 | 259 | 1.24 | 0.5 | 0.14 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | SRGAP1 | 57522 | 17382 | 1.23 | 0.71 | 0.21 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | TSC22D3 | 1831 | 3051 | 1.21 | 0.84 | 0.4 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | P3H2 | 55214 | 19317 | 1.2 | 0.63 | 0.12 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | LTBP4 | 8425 | 6717 | 1.2 | 0.76 | 0.27 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | AIF1L | 83543 | 28904 | 1.19 | 0.79 | 0.31 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | HTRA1 | 5654 | 9476 | 1.17 | 0.5 | 0.07 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | TJP1 | 7082 | 11827 | 1.16 | 0.72 | 0.25 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | IQGAP2 | 10788 | 6111 | 1.16 | 0.59 | 0.11 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | SYNPO | 11346 | 30672 | 1.13 | 0.52 | 0.04 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | NECTIN2 | 5819 | 9707 | 1.11 | 0.85 | 0.45 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | PLD3 | 23646 | 17158 | 1.11 | 0.81 | 0.45 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | DUSP23 | 54935 | 21480 | 1.1 | 0.57 | 0.17 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | SNCA | 6622 | 11138 | 1.1 | 0.64 | 0.18 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | FGF1 | 2246 | 3665 | 1.09 | 0.43 | 0.007 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | SLC9A3R2 | 9351 | 11076 | 1.08 | 0.58 | 0.15 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | VAMP2 | 6844 | 12643 | 1.06 | 0.83 | 0.48 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | AXL | 558 | 905 | 1.06 | 0.45 | 0.1 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | SDC2 | 6383 | 10659 | 1.06 | 0.82 | 0.49 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | VEGFA | 7422 | 12680 | 1.05 | 0.56 | 0.13 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | TAGLN2 | 8407 | 11554 | 1.05 | 0.62 | 0.24 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | MYH9 | 4627 | 7579 | 1.05 | 0.62 | 0.22 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | SEPTIN11 | 55752 | 25589 | 1.04 | 0.88 | 0.52 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | CTSL | 1514 | 2537 | 1.04 | 0.61 | 0.3 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | LEPROT | 54741 | 29477 | 1.04 | 0.83 | 0.45 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | PON2 | 5445 | 9205 | 1.03 | 0.76 | 0.4 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | PC | 5091 | 8636 | 1.03 | 0.47 | 0.05 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | CD151 | 977 | 1630 | 1.02 | 0.83 | 0.49 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | COL4A4 | 1286 | 2206 | 1.02 | 0.4 | 0.02 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | DUSP1 | 1843 | 3064 | 1.02 | 0.85 | 0.56 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | VIM | 7431 | 12692 | 1.01 | 0.99 | 0.8 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | PLA2R1 | 22925 | 9042 | 1.01 | 0.39 | 0.02 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | HACD2 | 201562 | 9640 | 1 | 0.49 | 0.14 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | GOLIM4 | 27333 | 15448 | 1 | 0.65 | 0.32 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | SAMD11 | 148398 | 28706 | 0.98 | 0.56 | 0.16 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | RAMP1 | 10267 | 9843 | 0.97 | 0.4 | 0.04 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | CTSD | 1509 | 2529 | 0.97 | 0.78 | 0.41 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | WT1-AS | 51352 | 18135 | 0.97 | 0.59 | 0.17 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | PLCE1 | 51196 | 17175 | 0.97 | 0.44 | 0.05 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | SLC48A1 | 55652 | 26035 | 0.96 | 0.48 | 0.09 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | NDRG2 | 57447 | 14460 | 0.96 | 0.54 | 0.19 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | EZR | 7430 | 12691 | 0.95 | 0.74 | 0.38 | 0 | 0 |
70 | 13 | Pod | Podocyte | combined | HMGN3 | 9324 | 12312 | 0.95 | 0.95 | 0.78 | 0 | 0 |