Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: combined
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
70 | 12 | NPCd | Nephron progenitor cells d | combined | HMGB2 | 3148 | 5000 | 1.71 | 0.99 | 0.45 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | UBE2C | 11065 | 15937 | 1.67 | 0.8 | 0.1 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | TOP2A | 7153 | 11989 | 1.56 | 0.78 | 0.09 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | NUSAP1 | 51203 | 18538 | 1.54 | 0.85 | 0.11 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | HIST1H4C | 8364 | 4787 | 1.42 | 0.63 | 0.21 | 1.02319698591471e-174 | 3.44755992434101e-170 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | PTTG1 | 9232 | 9690 | 1.4 | 0.82 | 0.21 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | TUBA1B | 10376 | 18809 | 1.39 | 1 | 0.81 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | CENPF | 1063 | 1857 | 1.35 | 0.72 | 0.1 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | PCLAF | 9768 | 28961 | 1.29 | 0.89 | 0.23 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | TYMS | 7298 | 12441 | 1.23 | 0.85 | 0.19 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | CCNB1 | 891 | 1579 | 1.22 | 0.56 | 0.1 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | BIRC5 | 332 | 593 | 1.21 | 0.76 | 0.1 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | CDK1 | 983 | 1722 | 1.21 | 0.72 | 0.09 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | CCNB2 | 9133 | 1580 | 1.18 | 0.65 | 0.1 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | CKS2 | 1164 | 2000 | 1.14 | 0.83 | 0.33 | 1.71562106983303e-225 | 5.7806136326954e-221 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | H2AFZ | 3015 | 4741 | 1.14 | 0.99 | 0.81 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | MAD2L1 | 4085 | 6763 | 1.13 | 0.85 | 0.17 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | SMC4 | 10051 | 14013 | 1.13 | 0.86 | 0.23 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | CDC20 | 991 | 1723 | 1.13 | 0.5 | 0.06 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | MKI67 | 4288 | 7107 | 1.12 | 0.69 | 0.07 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | PBK | 55872 | 18282 | 1.08 | 0.68 | 0.07 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | CKS1B | 1163 | 19083 | 1.04 | 0.86 | 0.32 | 3.95385832055143e-263 | 1.3322130225266e-258 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | ARL6IP1 | 23204 | 697 | 1.02 | 0.88 | 0.61 | 1.92622253495411e-96 | 6.49021420927438e-92 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | AURKB | 9212 | 11390 | 1.01 | 0.65 | 0.07 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | HMGB1 | 3146 | 4983 | 0.99 | 1 | 0.96 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | UBE2T | 29089 | 25009 | 0.98 | 0.73 | 0.12 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | PIMREG | 54478 | 25483 | 0.98 | 0.6 | 0.06 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | CCNA2 | 890 | 1578 | 0.97 | 0.62 | 0.06 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | CENPW | 387103 | 21488 | 0.96 | 0.75 | 0.17 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | PRC1 | 9055 | 9341 | 0.95 | 0.62 | 0.08 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | UBE2S | 27338 | 17895 | 0.95 | 0.73 | 0.29 | 1.45031095025118e-162 | 4.88667771577633e-158 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | GTSE1 | 51512 | 13698 | 0.94 | 0.59 | 0.05 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | TUBB | 203068 | 20778 | 0.94 | 0.99 | 0.9 | 1.09058105992331e-242 | 3.67460382330559e-238 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | TK1 | 7083 | 11830 | 0.92 | 0.66 | 0.11 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | RRM2 | 6241 | 10452 | 0.91 | 0.57 | 0.07 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | ZWINT | 11130 | 13195 | 0.9 | 0.71 | 0.15 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | H2AFX | 3014 | 4739 | 0.9 | 0.77 | 0.22 | 3.40481772099538e-266 | 1.14721928291218e-261 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | HMGN2 | 3151 | 4986 | 0.89 | 0.99 | 0.9 | 6.27110398377745e-265 | 2.11298577629397e-260 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | CENPA | 1058 | 1851 | 0.88 | 0.41 | 0.03 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | STMN1 | 3925 | 6510 | 0.88 | 1 | 0.94 | 1.29198790533422e-287 | 4.35322404823312e-283 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | TPX2 | 22974 | 1249 | 0.87 | 0.55 | 0.06 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | KPNA2 | 3838 | 6395 | 0.86 | 0.67 | 0.31 | 5.37023827942028e-105 | 1.80944808586787e-100 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | LMNB1 | 4001 | 6637 | 0.85 | 0.71 | 0.17 | 5.34991113460072e-279 | 1.80259905769237e-274 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | NNAT | 4826 | 7860 | 0.83 | 0.73 | 0.23 | 1.22073267342315e-195 | 4.11313666983196e-191 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | NUF2 | 83540 | 14621 | 0.82 | 0.54 | 0.06 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | TMSB15A | 11013 | 30744 | 0.82 | 0.83 | 0.26 | 3.06046471631276e-240 | 1.03119298151442e-235 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | CRABP2 | 1382 | 2339 | 0.8 | 0.64 | 0.24 | 2.36122568800696e-134 | 7.95591383317065e-130 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | PCNA | 5111 | 8729 | 0.8 | 0.74 | 0.31 | 5.4035733135129e-144 | 1.82067999225504e-139 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | CDKN3 | 1033 | 1791 | 0.8 | 0.51 | 0.06 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | ANP32E | 81611 | 16673 | 0.78 | 0.78 | 0.29 | 8.25183777269217e-192 | 2.7803742191309e-187 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | DTYMK | 1841 | 3061 | 0.77 | 0.78 | 0.25 | 2.8985718520228e-222 | 9.76644799820562e-218 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | PSRC1 | 84722 | 24472 | 0.76 | 0.44 | 0.06 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | PLK1 | 5347 | 9077 | 0.76 | 0.38 | 0.03 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | HMGB3 | 3149 | 5004 | 0.76 | 0.8 | 0.32 | 1.12580836599115e-171 | 3.79329870837057e-167 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | CKAP2 | 26586 | 1990 | 0.76 | 0.55 | 0.1 | 2.48852485472178e-298 | 8.38483564549956e-294 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | KIF22 | 3835 | 6391 | 0.76 | 0.64 | 0.17 | 7.55740558498618e-232 | 2.54639223780524e-227 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | TMPO | 7112 | 11875 | 0.76 | 0.77 | 0.25 | 7.4448024808241e-219 | 2.50845174788887e-214 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | TACC3 | 10460 | 11524 | 0.75 | 0.52 | 0.07 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | KIF20B | 9585 | 7212 | 0.74 | 0.59 | 0.11 | 1.07967312353034e-297 | 3.63785062242313e-293 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | DEK | 7913 | 2768 | 0.74 | 0.93 | 0.56 | 1.12098377145223e-157 | 3.77704271953116e-153 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | RANBP1 | 5902 | 9847 | 0.73 | 0.95 | 0.66 | 6.33753304652209e-159 | 2.13536838469515e-154 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | TUBA1C | 84790 | 20768 | 0.72 | 0.5 | 0.19 | 1.84193555875599e-92 | 6.20621767167244e-88 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | ORC6 | 23594 | 17151 | 0.72 | 0.6 | 0.12 | 4.75052587885901e-270 | 1.60064218962275e-265 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | CDCA4 | 55038 | 14625 | 0.71 | 0.57 | 0.12 | 7.34553260181783e-250 | 2.4750037548565e-245 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | CDCA3 | 83461 | 14624 | 0.71 | 0.43 | 0.04 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | LYPD1 | 116372 | 28431 | 0.71 | 0.73 | 0.27 | 1.1867493094634e-147 | 3.99863312330596e-143 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | SMC2 | 10592 | 14011 | 0.7 | 0.68 | 0.19 | 8.33932460343266e-214 | 2.8098520318806e-209 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | CENPM | 79019 | 18352 | 0.69 | 0.52 | 0.09 | 2.31710255735531e-302 | 7.80724535675297e-298 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | PSIP1 | 11168 | 9527 | 0.69 | 0.92 | 0.55 | 6.06314979172536e-143 | 2.04291769082394e-138 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | TUBB4B | 10383 | 20771 | 0.69 | 0.9 | 0.63 | 1.11040570099358e-94 | 3.74140096892778e-90 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | MCM7 | 4176 | 6950 | 0.69 | 0.75 | 0.29 | 3.2373170891247e-152 | 1.09078162000968e-147 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | HMMR | 3161 | 5012 | 0.69 | 0.38 | 0.04 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | FEN1 | 2237 | 3650 | 0.68 | 0.55 | 0.14 | 8.52866153221808e-196 | 2.87364721666556e-191 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | CENPU | 79682 | 21348 | 0.68 | 0.57 | 0.11 | 2.1654771949851e-283 | 7.2963588607828e-279 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | SPC25 | 57405 | 24031 | 0.68 | 0.45 | 0.05 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | NDC80 | 10403 | 16909 | 0.68 | 0.44 | 0.04 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | BUB3 | 9184 | 1151 | 0.68 | 0.72 | 0.32 | 2.17337163181209e-118 | 7.32295837622766e-114 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | DLK1 | 8788 | 2907 | 0.67 | 0.19 | 0.03 | 3.01266017886237e-81 | 1.01508572066589e-76 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | CDCA5 | 113130 | 14626 | 0.67 | 0.47 | 0.06 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | KIF23 | 9493 | 6392 | 0.66 | 0.46 | 0.04 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | CDCA8 | 55143 | 14629 | 0.66 | 0.45 | 0.05 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | MXD3 | 83463 | 14008 | 0.66 | 0.44 | 0.04 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | RRM1 | 6240 | 10451 | 0.65 | 0.58 | 0.16 | 2.03007553407034e-177 | 6.84013650449662e-173 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | DNAJC9 | 23234 | 19123 | 0.64 | 0.65 | 0.21 | 9.24311823825312e-166 | 3.11437625919701e-161 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | KIF2C | 11004 | 6393 | 0.64 | 0.42 | 0.04 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | H1FX | 8971 | 4722 | 0.63 | 0.87 | 0.54 | 4.52879716927494e-103 | 1.5259329182155e-98 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | DLGAP5 | 9787 | 16864 | 0.62 | 0.38 | 0.03 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | HJURP | 55355 | 25444 | 0.62 | 0.43 | 0.04 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | NUCKS1 | 64710 | 29923 | 0.62 | 0.98 | 0.79 | 6.23139397127975e-143 | 2.099605884683e-138 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | UHRF1 | 29128 | 12556 | 0.62 | 0.48 | 0.12 | 2.1603623836877e-149 | 7.27912501559732e-145 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | SGO1 | 151648 | 25088 | 0.62 | 0.46 | 0.06 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | RAD51AP1 | 10635 | 16956 | 0.62 | 0.48 | 0.07 | 3.57635042621305e-295 | 1.20501551260822e-290 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | RNASEH2A | 10535 | 18518 | 0.62 | 0.57 | 0.15 | 5.24939047904227e-180 | 1.7687296280085e-175 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | DEPDC1 | 55635 | 22949 | 0.61 | 0.35 | 0.03 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | CLSPN | 63967 | 19715 | 0.61 | 0.45 | 0.08 | 2.2727703257037e-217 | 7.65787233542605e-213 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | TROAP | 10024 | 12327 | 0.61 | 0.34 | 0.03 | 0 | 0 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | ASPM | 259266 | 19048 | 0.61 | 0.37 | 0.04 | 1.65501062192339e-281 | 5.57639278950866e-277 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | GGH | 8836 | 4248 | 0.61 | 0.7 | 0.23 | 9.09104149829326e-166 | 3.06313552243493e-161 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | CENPH | 64946 | 17268 | 0.61 | 0.52 | 0.12 | 2.21890539338963e-204 | 7.47637983248701e-200 |
70 | 12 | NPCd | Nephron progenitor cells d | combined | H2AFV | 94239 | 20664 | 0.6 | 0.83 | 0.47 | 3.92006037848892e-105 | 1.32082514392806e-100 |