Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: combined
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | HMGB2 | 3148 | 5000 | 1.71 | 0.99 | 0.45 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | UBE2C | 11065 | 15937 | 1.67 | 0.8 | 0.1 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | TOP2A | 7153 | 11989 | 1.56 | 0.78 | 0.09 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | NUSAP1 | 51203 | 18538 | 1.54 | 0.85 | 0.11 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | HIST1H4C | 8364 | 4787 | 1.42 | 0.63 | 0.21 | 1.0231969859147E-174 | 3.447559924341E-170 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | PTTG1 | 9232 | 9690 | 1.4 | 0.82 | 0.21 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | TUBA1B | 10376 | 18809 | 1.39 | 1 | 0.81 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | CENPF | 1063 | 1857 | 1.35 | 0.72 | 0.1 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | PCLAF | 9768 | 28961 | 1.29 | 0.89 | 0.23 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | TYMS | 7298 | 12441 | 1.23 | 0.85 | 0.19 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | CCNB1 | 891 | 1579 | 1.22 | 0.56 | 0.1 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | BIRC5 | 332 | 593 | 1.21 | 0.76 | 0.1 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | CDK1 | 983 | 1722 | 1.21 | 0.72 | 0.09 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | CCNB2 | 9133 | 1580 | 1.18 | 0.65 | 0.1 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | CKS2 | 1164 | 2000 | 1.14 | 0.83 | 0.33 | 1.715621069833E-225 | 5.7806136326954E-221 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | H2AFZ | 3015 | 4741 | 1.14 | 0.99 | 0.81 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | MAD2L1 | 4085 | 6763 | 1.13 | 0.85 | 0.17 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | SMC4 | 10051 | 14013 | 1.13 | 0.86 | 0.23 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | CDC20 | 991 | 1723 | 1.13 | 0.5 | 0.06 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | MKI67 | 4288 | 7107 | 1.12 | 0.69 | 0.07 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | PBK | 55872 | 18282 | 1.08 | 0.68 | 0.07 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | CKS1B | 1163 | 19083 | 1.04 | 0.86 | 0.32 | 3.9538583205514E-263 | 1.3322130225266E-258 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | ARL6IP1 | 23204 | 697 | 1.02 | 0.88 | 0.61 | 1.9262225349541E-96 | 6.4902142092744E-92 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | AURKB | 9212 | 11390 | 1.01 | 0.65 | 0.07 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | HMGB1 | 3146 | 4983 | 0.99 | 1 | 0.96 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | UBE2T | 29089 | 25009 | 0.98 | 0.73 | 0.12 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | PIMREG | 54478 | 25483 | 0.98 | 0.6 | 0.06 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | CCNA2 | 890 | 1578 | 0.97 | 0.62 | 0.06 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | CENPW | 387103 | 21488 | 0.96 | 0.75 | 0.17 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | PRC1 | 9055 | 9341 | 0.95 | 0.62 | 0.08 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | UBE2S | 27338 | 17895 | 0.95 | 0.73 | 0.29 | 1.4503109502512E-162 | 4.8866777157763E-158 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | GTSE1 | 51512 | 13698 | 0.94 | 0.59 | 0.05 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | TUBB | 203068 | 20778 | 0.94 | 0.99 | 0.9 | 1.0905810599233E-242 | 3.6746038233056E-238 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | TK1 | 7083 | 11830 | 0.92 | 0.66 | 0.11 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | RRM2 | 6241 | 10452 | 0.91 | 0.57 | 0.07 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | ZWINT | 11130 | 13195 | 0.9 | 0.71 | 0.15 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | H2AFX | 3014 | 4739 | 0.9 | 0.77 | 0.22 | 3.4048177209954E-266 | 1.1472192829122E-261 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | HMGN2 | 3151 | 4986 | 0.89 | 0.99 | 0.9 | 6.2711039837775E-265 | 2.112985776294E-260 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | CENPA | 1058 | 1851 | 0.88 | 0.41 | 0.03 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | STMN1 | 3925 | 6510 | 0.88 | 1 | 0.94 | 1.2919879053342E-287 | 4.3532240482331E-283 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | TPX2 | 22974 | 1249 | 0.87 | 0.55 | 0.06 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | KPNA2 | 3838 | 6395 | 0.86 | 0.67 | 0.31 | 5.3702382794203E-105 | 1.8094480858679E-100 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | LMNB1 | 4001 | 6637 | 0.85 | 0.71 | 0.17 | 5.3499111346007E-279 | 1.8025990576924E-274 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | NNAT | 4826 | 7860 | 0.83 | 0.73 | 0.23 | 1.2207326734231E-195 | 4.113136669832E-191 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | NUF2 | 83540 | 14621 | 0.82 | 0.54 | 0.06 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | TMSB15A | 11013 | 30744 | 0.82 | 0.83 | 0.26 | 3.0604647163128E-240 | 1.0311929815144E-235 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | CRABP2 | 1382 | 2339 | 0.8 | 0.64 | 0.24 | 2.361225688007E-134 | 7.9559138331706E-130 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | PCNA | 5111 | 8729 | 0.8 | 0.74 | 0.31 | 5.4035733135129E-144 | 1.820679992255E-139 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | CDKN3 | 1033 | 1791 | 0.8 | 0.51 | 0.06 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | ANP32E | 81611 | 16673 | 0.78 | 0.78 | 0.29 | 8.2518377726922E-192 | 2.7803742191309E-187 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | DTYMK | 1841 | 3061 | 0.77 | 0.78 | 0.25 | 2.8985718520228E-222 | 9.7664479982056E-218 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | PSRC1 | 84722 | 24472 | 0.76 | 0.44 | 0.06 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | PLK1 | 5347 | 9077 | 0.76 | 0.38 | 0.03 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | HMGB3 | 3149 | 5004 | 0.76 | 0.8 | 0.32 | 1.1258083659912E-171 | 3.7932987083706E-167 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | CKAP2 | 26586 | 1990 | 0.76 | 0.55 | 0.1 | 2.4885248547218E-298 | 8.3848356454996E-294 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | KIF22 | 3835 | 6391 | 0.76 | 0.64 | 0.17 | 7.5574055849862E-232 | 2.5463922378052E-227 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | TMPO | 7112 | 11875 | 0.76 | 0.77 | 0.25 | 7.4448024808241E-219 | 2.5084517478889E-214 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | TACC3 | 10460 | 11524 | 0.75 | 0.52 | 0.07 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | KIF20B | 9585 | 7212 | 0.74 | 0.59 | 0.11 | 1.0796731235303E-297 | 3.6378506224231E-293 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | DEK | 7913 | 2768 | 0.74 | 0.93 | 0.56 | 1.1209837714522E-157 | 3.7770427195312E-153 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | RANBP1 | 5902 | 9847 | 0.73 | 0.95 | 0.66 | 6.3375330465221E-159 | 2.1353683846952E-154 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | TUBA1C | 84790 | 20768 | 0.72 | 0.5 | 0.19 | 1.841935558756E-92 | 6.2062176716724E-88 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | ORC6 | 23594 | 17151 | 0.72 | 0.6 | 0.12 | 4.750525878859E-270 | 1.6006421896227E-265 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | CDCA4 | 55038 | 14625 | 0.71 | 0.57 | 0.12 | 7.3455326018178E-250 | 2.4750037548565E-245 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | CDCA3 | 83461 | 14624 | 0.71 | 0.43 | 0.04 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | LYPD1 | 116372 | 28431 | 0.71 | 0.73 | 0.27 | 1.1867493094634E-147 | 3.998633123306E-143 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | SMC2 | 10592 | 14011 | 0.7 | 0.68 | 0.19 | 8.3393246034327E-214 | 2.8098520318806E-209 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | CENPM | 79019 | 18352 | 0.69 | 0.52 | 0.09 | 2.3171025573553E-302 | 7.807245356753E-298 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | PSIP1 | 11168 | 9527 | 0.69 | 0.92 | 0.55 | 6.0631497917254E-143 | 2.0429176908239E-138 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | TUBB4B | 10383 | 20771 | 0.69 | 0.9 | 0.63 | 1.1104057009936E-94 | 3.7414009689278E-90 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | MCM7 | 4176 | 6950 | 0.69 | 0.75 | 0.29 | 3.2373170891247E-152 | 1.0907816200097E-147 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | HMMR | 3161 | 5012 | 0.69 | 0.38 | 0.04 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | FEN1 | 2237 | 3650 | 0.68 | 0.55 | 0.14 | 8.5286615322181E-196 | 2.8736472166656E-191 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | CENPU | 79682 | 21348 | 0.68 | 0.57 | 0.11 | 2.1654771949851E-283 | 7.2963588607828E-279 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | SPC25 | 57405 | 24031 | 0.68 | 0.45 | 0.05 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | NDC80 | 10403 | 16909 | 0.68 | 0.44 | 0.04 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | BUB3 | 9184 | 1151 | 0.68 | 0.72 | 0.32 | 2.1733716318121E-118 | 7.3229583762277E-114 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | DLK1 | 8788 | 2907 | 0.67 | 0.19 | 0.03 | 3.0126601788624E-81 | 1.0150857206659E-76 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | CDCA5 | 113130 | 14626 | 0.67 | 0.47 | 0.06 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | KIF23 | 9493 | 6392 | 0.66 | 0.46 | 0.04 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | CDCA8 | 55143 | 14629 | 0.66 | 0.45 | 0.05 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | MXD3 | 83463 | 14008 | 0.66 | 0.44 | 0.04 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | RRM1 | 6240 | 10451 | 0.65 | 0.58 | 0.16 | 2.0300755340703E-177 | 6.8401365044966E-173 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | DNAJC9 | 23234 | 19123 | 0.64 | 0.65 | 0.21 | 9.2431182382531E-166 | 3.114376259197E-161 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | KIF2C | 11004 | 6393 | 0.64 | 0.42 | 0.04 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | H1FX | 8971 | 4722 | 0.63 | 0.87 | 0.54 | 4.5287971692749E-103 | 1.5259329182155E-98 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | DLGAP5 | 9787 | 16864 | 0.62 | 0.38 | 0.03 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | HJURP | 55355 | 25444 | 0.62 | 0.43 | 0.04 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | NUCKS1 | 64710 | 29923 | 0.62 | 0.98 | 0.79 | 6.2313939712797E-143 | 2.099605884683E-138 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | UHRF1 | 29128 | 12556 | 0.62 | 0.48 | 0.12 | 2.1603623836877E-149 | 7.2791250155973E-145 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | SGO1 | 151648 | 25088 | 0.62 | 0.46 | 0.06 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | RAD51AP1 | 10635 | 16956 | 0.62 | 0.48 | 0.07 | 3.576350426213E-295 | 1.2050155126082E-290 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | RNASEH2A | 10535 | 18518 | 0.62 | 0.57 | 0.15 | 5.2493904790423E-180 | 1.7687296280085E-175 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | DEPDC1 | 55635 | 22949 | 0.61 | 0.35 | 0.03 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | CLSPN | 63967 | 19715 | 0.61 | 0.45 | 0.08 | 2.2727703257037E-217 | 7.657872335426E-213 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | TROAP | 10024 | 12327 | 0.61 | 0.34 | 0.03 | 0 | 0 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | ASPM | 259266 | 19048 | 0.61 | 0.37 | 0.04 | 1.6550106219234E-281 | 5.5763927895087E-277 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | GGH | 8836 | 4248 | 0.61 | 0.7 | 0.23 | 9.0910414982933E-166 | 3.0631355224349E-161 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | CENPH | 64946 | 17268 | 0.61 | 0.52 | 0.12 | 2.2189053933896E-204 | 7.476379832487E-200 |
| 70 | 12 | NPCd | Nephron progenitor cells d | combined | H2AFV | 94239 | 20664 | 0.6 | 0.83 | 0.47 | 3.9200603784889E-105 | 1.3208251439281E-100 |