Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: combined
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
70 | 11 | NPCc | Nephron progenitor cells c | combined | CRABP2 | 1382 | 2339 | 1.49 | 0.86 | 0.19 | 0 | 0 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | NNAT | 4826 | 7860 | 1.22 | 0.79 | 0.2 | 0 | 0 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | TMEM100 | 55273 | 25607 | 1.22 | 0.67 | 0.16 | 0 | 0 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | LYPD1 | 116372 | 28431 | 1.01 | 0.79 | 0.24 | 0 | 0 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | DAPL1 | 92196 | 21490 | 0.95 | 0.49 | 0.13 | 8.20209213361786e-305 | 2.7636129235012e-300 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | CITED1 | 4435 | 1986 | 0.93 | 0.5 | 0.07 | 0 | 0 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | RSPO3 | 84870 | 20866 | 0.85 | 0.45 | 0.08 | 0 | 0 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | HLA-DQB1 | 3119 | 4944 | 0.83 | 0.5 | 0.1 | 0 | 0 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | NKAIN3 | 286183 | 26829 | 0.83 | 0.55 | 0.1 | 0 | 0 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | EYA1 | 2138 | 3519 | 0.81 | 0.49 | 0.08 | 0 | 0 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | PRXL2A | 84293 | 28651 | 0.76 | 0.81 | 0.5 | 3.64841293677405e-252 | 1.22929625491665e-247 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | IGF2 | 3481 | 5466 | 0.75 | 0.91 | 0.47 | 0 | 0 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | HOXB9 | 3219 | 5120 | 0.75 | 0.47 | 0.12 | 0 | 0 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | TUBA1A | 7846 | 20766 | 0.73 | 0.95 | 0.7 | 1.05598025576197e-295 | 3.55801987376438e-291 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | MEOX1 | 4222 | 7013 | 0.73 | 0.4 | 0.06 | 0 | 0 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | MARCKSL1 | 65108 | 7142 | 0.72 | 0.99 | 0.86 | 0 | 0 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | SLC15A1 | 6564 | 10920 | 0.71 | 0.36 | 0.06 | 0 | 0 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | SCG5 | 6447 | 10816 | 0.7 | 0.52 | 0.15 | 0 | 0 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | PAX2 | 5076 | 8616 | 0.67 | 0.66 | 0.31 | 3.12640870773885e-215 | 1.05341214998553e-210 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | COL2A1 | 1280 | 2200 | 0.66 | 0.48 | 0.13 | 6.95511215784268e-298 | 2.34345549046351e-293 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | CENPV | 201161 | 29920 | 0.65 | 0.65 | 0.32 | 1.12192856818129e-194 | 3.78022611763003e-190 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | UHRF1 | 29128 | 12556 | 0.64 | 0.38 | 0.11 | 6.34969463188337e-202 | 2.13946610926678e-197 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | UCHL1 | 7345 | 12513 | 0.63 | 0.54 | 0.22 | 9.6050307110545e-204 | 3.2363190477827e-199 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | NTRK2 | 4915 | 8032 | 0.62 | 0.67 | 0.39 | 6.05288291280818e-139 | 2.03945836864159e-134 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | SIX1 | 6495 | 10887 | 0.62 | 0.44 | 0.11 | 1.83964288242487e-268 | 6.19849272804235e-264 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | MCM7 | 4176 | 6950 | 0.61 | 0.57 | 0.28 | 1.11335127390626e-155 | 3.75132578229974e-151 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | SEPTIN6 | 23157 | 15848 | 0.61 | 0.59 | 0.28 | 6.72415394645884e-185 | 2.26563643071984e-180 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | LRATD1 | 151354 | 20743 | 0.6 | 0.37 | 0.14 | 2.67532291434939e-142 | 9.01423302760885e-138 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | COL9A2 | 1298 | 2218 | 0.59 | 0.37 | 0.09 | 1.84367031412632e-252 | 6.21206275641722e-248 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | HOXC6 | 3223 | 5128 | 0.59 | 0.44 | 0.13 | 6.76816915155294e-237 | 2.28046691392425e-232 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | MCM3 | 4172 | 6945 | 0.59 | 0.51 | 0.25 | 2.16991460504519e-132 | 7.31131027023927e-128 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | HAS2 | 3037 | 4819 | 0.59 | 0.35 | 0.07 | 1.99132716857405e-278 | 6.70957776179339e-274 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | SINHCAF | 58516 | 30702 | 0.59 | 0.81 | 0.49 | 2.54917044825602e-196 | 8.58917490835382e-192 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | HOXB-AS3 | 404266 | 40283 | 0.59 | 0.37 | 0.11 | 6.6308759612061e-184 | 2.23420734636878e-179 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | NASP | 4678 | 7644 | 0.59 | 0.77 | 0.49 | 3.44592208494433e-170 | 1.16106898730114e-165 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | BMPER | 168667 | 24154 | 0.58 | 0.33 | 0.06 | 2.02583345158885e-277 | 6.82584323178347e-273 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | PHLDA1 | 22822 | 8933 | 0.58 | 0.52 | 0.22 | 1.24679198024296e-172 | 4.20094089823063e-168 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | GINS2 | 51659 | 24575 | 0.58 | 0.41 | 0.16 | 1.08108775506287e-151 | 3.64261708190882e-147 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | RBP1 | 5947 | 9919 | 0.58 | 0.9 | 0.51 | 1.17689965616321e-231 | 3.96544570147632e-227 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | SIX2 | 10736 | 10888 | 0.57 | 0.35 | 0.07 | 7.89893911230478e-300 | 2.66146854449997e-295 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | MEIS2 | 4212 | 7001 | 0.56 | 0.65 | 0.3 | 2.57173167780298e-189 | 8.66519271518936e-185 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | ECEL1 | 9427 | 3147 | 0.55 | 0.29 | 0.04 | 0 | 0 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | MDK | 4192 | 6972 | 0.55 | 0.99 | 0.78 | 6.76368712324103e-255 | 2.27895673930483e-250 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | ITGA8 | 8516 | 6144 | 0.55 | 0.37 | 0.1 | 2.59263172641049e-221 | 8.73561333896751e-217 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | CENPW | 387103 | 21488 | 0.55 | 0.43 | 0.17 | 5.81642570393577e-142 | 1.95978647668412e-137 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | WASF3 | 10810 | 12734 | 0.54 | 0.45 | 0.17 | 1.75918059671757e-168 | 5.92738310258019e-164 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | SHISA3 | 152573 | 25159 | 0.54 | 0.44 | 0.17 | 2.7174763662984e-150 | 9.15626486860582e-146 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | HMGA2 | 8091 | 5009 | 0.54 | 0.5 | 0.27 | 1.22783383781787e-109 | 4.13706333314355e-105 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | ELAVL4 | 1996 | 3315 | 0.53 | 0.25 | 0.03 | 0 | 0 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | NR2F1 | 7025 | 7975 | 0.52 | 0.73 | 0.44 | 1.68171867620093e-152 | 5.66638290759143e-148 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | PCSK1N | 27344 | 17301 | 0.52 | 0.48 | 0.2 | 4.02606901492432e-156 | 1.3565436938886e-151 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | STMN1 | 3925 | 6510 | 0.52 | 0.99 | 0.94 | 1.71692882327019e-275 | 5.78501997712657e-271 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | HOXA10 | 3206 | 5100 | 0.51 | 0.78 | 0.5 | 9.0354903211107e-149 | 3.04441810879504e-144 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | UNG | 7374 | 12572 | 0.51 | 0.43 | 0.19 | 1.82553780069378e-121 | 6.15096706565764e-117 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | ETV4 | 2118 | 3493 | 0.51 | 0.32 | 0.09 | 1.40809664528684e-178 | 4.74444083662949e-174 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | MCM5 | 4174 | 6948 | 0.51 | 0.35 | 0.12 | 3.62430156526168e-147 | 1.22117216939927e-142 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | PCNA | 5111 | 8729 | 0.51 | 0.53 | 0.3 | 2.91686625011689e-99 | 9.82808914314383e-95 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | SOX11 | 6664 | 11191 | 0.5 | 0.52 | 0.31 | 1.71282620338156e-83 | 5.77119660967382e-79 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | HOXB2 | 3212 | 5113 | 0.49 | 0.46 | 0.22 | 2.97463856344889e-119 | 1.00227471756847e-114 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | HOXC10 | 3226 | 5122 | 0.48 | 0.35 | 0.12 | 1.4047270170294e-143 | 4.73308721117886e-139 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | CDH7 | 1005 | 1766 | 0.48 | 0.33 | 0.09 | 7.50195880347586e-178 | 2.52770999924315e-173 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | DEK | 7913 | 2768 | 0.48 | 0.78 | 0.55 | 3.41461403969394e-118 | 1.15052005453448e-113 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | HMGB1 | 3146 | 4983 | 0.47 | 1 | 0.95 | 1.04567210349872e-260 | 3.52328758552858e-256 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | FBLN1 | 2192 | 3600 | 0.46 | 0.55 | 0.29 | 4.64708604036683e-122 | 1.5657891704412e-117 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | REC8 | 9985 | 16879 | 0.46 | 0.4 | 0.16 | 3.10095222018348e-137 | 1.04483484106862e-132 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | PRKAR1A | 5573 | 9388 | 0.46 | 0.72 | 0.56 | 4.36810407572158e-81 | 1.47178898727363e-76 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | TMSB15A | 11013 | 30744 | 0.46 | 0.53 | 0.26 | 8.74366928321319e-122 | 2.94609192828585e-117 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | C1QTNF4 | 114900 | 14346 | 0.45 | 0.42 | 0.19 | 2.2533900776584e-115 | 7.59257252766221e-111 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | HNRNPA1 | 3178 | 5031 | 0.45 | 1 | 0.99 | 3.87435308903429e-250 | 1.30542452981922e-245 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | H2AFY2 | 55506 | 14453 | 0.44 | 0.55 | 0.31 | 1.05538061947722e-105 | 3.55599945926655e-101 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | CADM1 | 23705 | 5951 | 0.44 | 0.7 | 0.4 | 6.12200867472753e-132 | 2.06274960286269e-127 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | LAMA4 | 3910 | 6484 | 0.44 | 0.36 | 0.14 | 7.72615707646228e-122 | 2.6032513653432e-117 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | TUBB | 203068 | 20778 | 0.44 | 0.98 | 0.9 | 6.85831921681774e-163 | 2.31084207691457e-158 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | NREP | 9315 | 16834 | 0.44 | 0.85 | 0.66 | 3.35576573092832e-131 | 1.13069170537899e-126 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | NME1 | 4830 | 7849 | 0.43 | 0.67 | 0.45 | 1.00431246269653e-98 | 3.38393041180967e-94 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | PSIP1 | 11168 | 9527 | 0.43 | 0.75 | 0.54 | 2.35725360945336e-104 | 7.94253031169216e-100 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | SMARCC1 | 6599 | 11104 | 0.43 | 0.64 | 0.42 | 2.09256836133567e-94 | 7.0506998366844e-90 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | MCM4 | 4173 | 6947 | 0.43 | 0.28 | 0.11 | 1.64541478150485e-95 | 5.54406056480244e-91 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | PCBP4 | 57060 | 8652 | 0.43 | 0.36 | 0.16 | 1.79144685057661e-102 | 6.03610101833283e-98 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | HOXA11 | 3207 | 5101 | 0.43 | 0.31 | 0.1 | 1.14567137627186e-144 | 3.8602251352104e-140 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | PDGFC | 56034 | 8801 | 0.42 | 0.41 | 0.19 | 1.82864353877191e-98 | 6.16143153953808e-94 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | MEIS1 | 4211 | 7000 | 0.42 | 0.4 | 0.15 | 5.24615216761002e-128 | 1.76763851135452e-123 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | BCL7A | 605 | 1004 | 0.42 | 0.38 | 0.18 | 2.13103544756132e-88 | 7.18031083701311e-84 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | TRIL | 9865 | 22200 | 0.42 | 0.3 | 0.1 | 1.11253304449572e-122 | 3.74856884012389e-118 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | MLLT11 | 10962 | 16997 | 0.41 | 0.54 | 0.3 | 4.2492725985704e-96 | 1.43174990936231e-91 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | FADS1 | 3992 | 3574 | 0.41 | 0.48 | 0.25 | 1.26185684616269e-92 | 4.25170045746056e-88 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | APEX1 | 328 | 587 | 0.41 | 0.84 | 0.64 | 5.38726500338195e-106 | 1.81518507023951e-101 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | RANBP1 | 5902 | 9847 | 0.41 | 0.83 | 0.65 | 3.83051838703954e-110 | 1.2906548653291e-105 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | DDAH2 | 23564 | 2716 | 0.41 | 0.82 | 0.64 | 1.74073777335427e-95 | 5.86524185353987e-91 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | PRDX2 | 7001 | 9353 | 0.41 | 0.92 | 0.77 | 6.24261299313198e-130 | 2.10338602190589e-125 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | HELLS | 3070 | 4861 | 0.4 | 0.35 | 0.17 | 1.14503659157129e-79 | 3.85808629164029e-75 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | H2AFY | 9555 | 4740 | 0.4 | 0.74 | 0.55 | 2.44303619958266e-87 | 8.23156617087383e-83 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | NR2F2 | 7026 | 7976 | 0.4 | 0.85 | 0.61 | 1.83701890107305e-115 | 6.18965148527553e-111 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | AP1S2 | 8905 | 560 | 0.4 | 0.37 | 0.19 | 4.38397139270465e-74 | 1.47713532105791e-69 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | PCLAF | 9768 | 28961 | 0.4 | 0.4 | 0.25 | 5.47754077196343e-43 | 1.84560258770536e-38 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | G6PD | 2539 | 4057 | 0.4 | 0.32 | 0.13 | 3.11049025171884e-99 | 1.04804858541415e-94 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | CBX1 | 10951 | 1551 | 0.39 | 0.68 | 0.45 | 1.15222132324663e-91 | 3.88229452654719e-87 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | MCM2 | 4171 | 6944 | 0.39 | 0.27 | 0.11 | 2.29198365726825e-80 | 7.72260973479965e-76 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | NAE1 | 8883 | 621 | 0.38 | 0.46 | 0.28 | 1.68691669571404e-67 | 5.68389711453887e-63 |
70 | 11 | NPCc | Nephron progenitor cells c | combined | CCND2 | 894 | 1583 | 0.38 | 0.42 | 0.22 | 1.58165597617236e-76 | 5.32923164611514e-72 |