Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: combined
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | DEFB1 | 1672 | 2766 | 3.09 | 0.58 | 0.01 | 0 | 0 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | SLC12A1 | 6557 | 10910 | 1.74 | 0.53 | 0.01 | 0 | 0 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | MAL | 4118 | 6817 | 1.73 | 0.81 | 0.11 | 7.21961653716931e-185 | 2.43257759603383e-180 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | FXYD2 | 486 | 4026 | 1.63 | 0.81 | 0.14 | 3.80292443140869e-137 | 1.28135735791884e-132 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | ATP1B1 | 481 | 804 | 1.55 | 0.85 | 0.33 | 7.68665517403851e-71 | 2.58994159434054e-66 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | CLDN10 | 9071 | 2033 | 1.47 | 0.49 | 0.09 | 1.96953237230921e-68 | 6.63614237525864e-64 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | SPP1 | 6696 | 11255 | 1.37 | 0.47 | 0.12 | 1.74064581315749e-39 | 5.86493200285284e-35 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | DUSP9 | 1852 | 3076 | 1.36 | 0.59 | 0.13 | 1.30412476695641e-70 | 4.39411798978292e-66 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | TMEM52B | 120939 | 26438 | 1.28 | 0.23 | 0.01 | 3.36589593355338e-144 | 1.13410497585147e-139 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | KNG1 | 3827 | 6383 | 1.25 | 0.4 | 0.003 | 0 | 0 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | CLDN3 | 1365 | 2045 | 1.21 | 0.82 | 0.28 | 3.80396317806382e-67 | 1.28170735321682e-62 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | WFDC2 | 10406 | 15939 | 1.21 | 0.7 | 0.21 | 8.56829974837941e-59 | 2.88700291721896e-54 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | CLDN4 | 1364 | 2046 | 1.19 | 0.75 | 0.13 | 4.8601408585444e-116 | 1.63757586087795e-111 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | KCNJ1 | 3758 | 6255 | 1.15 | 0.46 | 0.006 | 0 | 0 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | APOE | 348 | 613 | 1.13 | 0.88 | 0.26 | 4.83995108346897e-81 | 1.63077311806403e-76 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | NEAT1 | 283131 | 30815 | 1.13 | 0.72 | 0.48 | 1.01302873792021e-21 | 3.41329902954837e-17 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | CHCHD10 | 400916 | 15559 | 1.12 | 0.74 | 0.27 | 4.16724195026726e-56 | 1.40411050272305e-51 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | SAT1 | 6303 | 10540 | 1.11 | 0.87 | 0.45 | 1.6235317858305e-45 | 5.47032799917727e-41 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | ATP6V1B1 | 525 | 853 | 1.11 | 0.45 | 0.004 | 0 | 0 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | ATP1A1 | 476 | 799 | 1.09 | 0.79 | 0.46 | 4.09746961878489e-34 | 1.38060141335338e-29 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | MECOM | 2122 | 3498 | 1.09 | 0.56 | 0.07 | 1.20227959596892e-122 | 4.05096087065766e-118 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | ELF3 | 1999 | 3318 | 1.08 | 0.76 | 0.18 | 7.61807337768406e-83 | 2.56683364387687e-78 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | TUBB2B | 347733 | 30829 | 1.08 | 0.7 | 0.33 | 7.87800681679063e-35 | 2.65441561684943e-30 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | CA12 | 771 | 1371 | 1.05 | 0.54 | 0.1 | 3.51601785353379e-79 | 1.18468705556968e-74 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | ERBB4 | 2066 | 3432 | 0.98 | 0.57 | 0.09 | 3.19692827286677e-95 | 1.07717301225973e-90 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | COX1 | 4512 | 7419 | 0.97 | 1 | 0.99 | 3.6170636483796e-70 | 1.21873342568502e-65 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | TMEM213 | 155006 | 27220 | 0.97 | 0.4 | 0.01 | 1.33990854695481e-232 | 4.51468785810952e-228 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | CRYL1 | 51084 | 18246 | 0.96 | 0.63 | 0.16 | 4.94857427557956e-64 | 1.66737261641378e-59 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | PAPPA2 | 60676 | 14615 | 0.92 | 0.23 | 0.02 | 3.1663448476035e-56 | 1.06686823295152e-51 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | COX3 | 4514 | 7422 | 0.92 | 1 | 0.99 | 1.99621787733396e-76 | 6.72605651588905e-72 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | MPC1 | 51660 | 21606 | 0.92 | 0.66 | 0.22 | 2.03509192237865e-50 | 6.85703872326262e-46 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | TNFRSF12A | 51330 | 18152 | 0.91 | 0.39 | 0.13 | 1.8661755283736e-21 | 6.287891825302e-17 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | IDH2 | 3418 | 5383 | 0.91 | 0.68 | 0.39 | 2.58185379031842e-24 | 8.69929816109889e-20 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | HOXD8 | 3234 | 5139 | 0.9 | 0.63 | 0.18 | 2.10991526293583e-56 | 7.109148486936e-52 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | COX2 | 4513 | 7421 | 0.89 | 1 | 0.99 | 8.79501537878281e-69 | 2.96339248172708e-64 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | ND4 | 4538 | 7459 | 0.87 | 1 | 0.99 | 3.38615910777109e-68 | 1.14093244977239e-63 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | GLRX | 2745 | 4330 | 0.84 | 0.55 | 0.11 | 1.49083021663264e-69 | 5.02320333192202e-65 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | PRPS2 | 5634 | 9465 | 0.83 | 0.4 | 0.09 | 1.20827078048088e-42 | 4.07114756775227e-38 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | KLF6 | 1316 | 2235 | 0.83 | 0.78 | 0.44 | 6.30128992827227e-27 | 2.12315662843206e-22 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | ND1 | 4535 | 7455 | 0.82 | 0.99 | 0.94 | 9.22809690156556e-56 | 3.1093149700135e-51 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | MPC2 | 25874 | 24515 | 0.81 | 0.87 | 0.46 | 1.96318076572991e-39 | 6.61474127205036e-35 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | CPM | 1368 | 2311 | 0.8 | 0.37 | 0.05 | 1.56917668521862e-59 | 5.28718392317561e-55 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | LIMCH1 | 22998 | 29191 | 0.79 | 0.55 | 0.11 | 6.88978808782436e-62 | 2.32144519831154e-57 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | CYTB | 4519 | 7427 | 0.79 | 1 | 0.99 | 4.34572753230467e-69 | 1.46424943473474e-64 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | GSTM3 | 2947 | 4635 | 0.79 | 0.61 | 0.25 | 1.2564875997056e-28 | 4.23360931844805e-24 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | CYSTM1 | 84418 | 30239 | 0.79 | 0.67 | 0.29 | 1.4387984081607e-33 | 4.84788735645668e-29 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | ATP6 | 4508 | 7414 | 0.78 | 1 | 0.98 | 1.38548381692303e-53 | 4.66824917274045e-49 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | CEBPD | 1052 | 1835 | 0.78 | 0.66 | 0.35 | 3.55194542506553e-20 | 1.19679249152158e-15 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | ND3 | 4537 | 7458 | 0.77 | 0.95 | 0.78 | 3.74093910646754e-33 | 1.26047202253317e-28 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | S100A10 | 6281 | 10487 | 0.77 | 0.61 | 0.3 | 2.17490907516331e-19 | 7.32813863785527e-15 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | CLCN5 | 1184 | 2023 | 0.76 | 0.44 | 0.08 | 9.05556916675472e-57 | 3.05118347504634e-52 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | ESRRG | 2104 | 3474 | 0.76 | 0.42 | 0.04 | 5.52993307758965e-112 | 1.86325565116306e-107 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | CDH16 | 1014 | 1755 | 0.73 | 0.44 | 0.08 | 2.00107569503268e-56 | 6.74242444684312e-52 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | GOT1 | 2805 | 4432 | 0.73 | 0.46 | 0.16 | 9.11325890092776e-28 | 3.0706214540786e-23 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | LINC02381 | 400043 | 53304 | 0.72 | 0.48 | 0.14 | 5.29329437243411e-36 | 1.78352260584795e-31 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | PTGER3 | 5733 | 9595 | 0.72 | 0.35 | 0.02 | 5.85415403055537e-157 | 1.97249865905533e-152 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | TMEM72 | 643236 | 31658 | 0.72 | 0.4 | 0.02 | 5.32231560994678e-166 | 1.79330102161547e-161 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | DNER | 92737 | 24456 | 0.71 | 0.42 | 0.06 | 8.08223134607272e-78 | 2.72322702974574e-73 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | CYS1 | 192668 | 18525 | 0.71 | 0.48 | 0.09 | 1.00401967089039e-57 | 3.38294387909808e-53 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | KCNJ16 | 3773 | 6262 | 0.71 | 0.44 | 0.07 | 1.42764566862433e-66 | 4.81030931586281e-62 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | MCRIP2 | 84331 | 14142 | 0.71 | 0.45 | 0.11 | 7.02113773274847e-43 | 2.36570214767227e-38 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | CD24 | 100133941 | 1645 | 0.7 | 0.92 | 0.54 | 1.30716070749516e-33 | 4.40434728783418e-29 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | MUC1 | 4582 | 7508 | 0.7 | 0.35 | 0.02 | 3.57901952996926e-160 | 1.20591484042784e-155 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | CKB | 1152 | 1991 | 0.7 | 0.73 | 0.45 | 1.0040100196477e-21 | 3.38291136020095e-17 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | UQCRB | 7381 | 12582 | 0.69 | 0.87 | 0.64 | 4.87351642169323e-24 | 1.64208262312532e-19 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | ND2 | 4536 | 7456 | 0.68 | 0.99 | 0.97 | 5.4464227305751e-47 | 1.83511767483997e-42 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | DMKN | 93099 | 25063 | 0.67 | 0.57 | 0.17 | 3.41912347265633e-42 | 1.15203946287682e-37 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | SPINT1 | 6692 | 11246 | 0.67 | 0.5 | 0.1 | 1.13867040946724e-59 | 3.83663607765892e-55 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | FNIP2 | 57600 | 29280 | 0.67 | 0.4 | 0.08 | 2.18561692606489e-47 | 7.36421767068304e-43 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | SLC5A3 | 6526 | 11038 | 0.67 | 0.5 | 0.14 | 2.0410223208629e-38 | 6.87702060791545e-34 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | MITF | 4286 | 7105 | 0.67 | 0.5 | 0.11 | 4.85883675007927e-50 | 1.63713645457171e-45 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | EPCAM | 4072 | 11529 | 0.67 | 0.82 | 0.43 | 1.50578576605931e-28 | 5.07359456016025e-24 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | KRT8 | 3856 | 6446 | 0.67 | 0.67 | 0.24 | 1.10671634845943e-34 | 3.7289700644992e-30 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | IRX2 | 153572 | 14359 | 0.66 | 0.33 | 0.03 | 4.63806741737412e-93 | 1.56275043561004e-88 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | NUDT4 | 11163 | 8051 | 0.66 | 0.57 | 0.3 | 6.67960096250635e-17 | 2.25062474830689e-12 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | MRPS6 | 64968 | 14051 | 0.66 | 0.81 | 0.55 | 5.47981102610181e-22 | 1.84636752713474e-17 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | ANXA11 | 311 | 535 | 0.65 | 0.55 | 0.19 | 1.05534589055378e-34 | 3.5558824436319e-30 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | GAL3ST1 | 9514 | 24240 | 0.64 | 0.37 | 0.04 | 6.98030702884898e-83 | 2.35194465030038e-78 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | COX5B | 1329 | 2269 | 0.64 | 0.87 | 0.73 | 1.20048494396424e-20 | 4.0449139701931e-16 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | ATP5MC1 | 516 | 841 | 0.64 | 0.68 | 0.45 | 8.95167280501385e-17 | 3.01617663492137e-12 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | COX7C | 1350 | 2292 | 0.64 | 0.96 | 0.87 | 1.05254739528756e-29 | 3.5464531936819e-25 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | COL6A1 | 1291 | 2211 | 0.63 | 0.55 | 0.25 | 5.54853427161392e-20 | 1.86952313747759e-15 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | ZNF44 | 51710 | 13110 | 0.63 | 0.44 | 0.09 | 8.84192957637053e-49 | 2.97919975146228e-44 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | COA3 | 28958 | 24990 | 0.63 | 0.71 | 0.44 | 3.23351452393189e-20 | 1.08950038369361e-15 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | IGFBP7 | 3490 | 5476 | 0.63 | 0.92 | 0.56 | 4.5277412203264e-32 | 1.52557712677678e-27 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | COX6B1 | 1340 | 2280 | 0.63 | 0.9 | 0.69 | 4.97771005316804e-24 | 1.67718962531444e-19 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | UPP1 | 7378 | 12576 | 0.62 | 0.33 | 0.03 | 3.89474442018799e-87 | 1.31229518493814e-82 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | VAV3 | 10451 | 12659 | 0.62 | 0.37 | 0.08 | 2.63036490550673e-36 | 8.86275151261437e-32 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | ADGRG1 | 9289 | 4512 | 0.61 | 0.31 | 0.02 | 2.61675562594952e-105 | 8.81689640607433e-101 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | MCCD1 | 401250 | 20668 | 0.61 | 0.31 | 0.02 | 1.50086413365518e-126 | 5.05701161193776e-122 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | CLDN16 | 10686 | 2037 | 0.61 | 0.22 | 0.005 | 3.35622135767757e-226 | 1.13084522425588e-221 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | TFAP2B | 7021 | 11743 | 0.6 | 0.29 | 0.01 | 1.3744334364653e-132 | 4.63101602082619e-128 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | POU3F3 | 5455 | 9216 | 0.6 | 0.39 | 0.06 | 7.6325012726703e-65 | 2.57169497881353e-60 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | IGFBP3 | 3486 | 5472 | 0.6 | 0.2 | 0.02 | 1.50629832934841e-43 | 5.07532159090653e-39 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | ATP6V1F | 9296 | 16832 | 0.6 | 0.76 | 0.54 | 6.05840513359498e-20 | 2.04131902571349e-15 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | IVNS1ABP | 10625 | 16951 | 0.6 | 0.53 | 0.23 | 4.6216450109425e-23 | 1.55721706998697e-18 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | COX7B | 1349 | 2291 | 0.6 | 0.74 | 0.54 | 4.11458164411058e-16 | 1.38636713916662e-11 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | SOX9 | 6662 | 11204 | 0.59 | 0.29 | 0.06 | 2.23524171156977e-30 | 7.5314234229632e-26 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | JUND | 3727 | 6206 | 0.59 | 0.45 | 0.18 | 2.36683809176384e-18 | 7.97482426638908e-14 |
70 | 1 | DTLH | Distal tubule/loop of Henle | combined | FTL | 2512 | 3999 | 0.59 | 1 | 0.97 | 5.42850370026272e-47 | 1.82908003676652e-42 |