Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: combined
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
70 | 0 | CnT | Connecting tubule | combined | CLDN4 | 1364 | 2046 | 1.48 | 0.83 | 0.13 | 5.85409384120005e-118 | 1.97247837885394e-113 |
70 | 0 | CnT | Connecting tubule | combined | WFDC2 | 10406 | 15939 | 1.43 | 0.89 | 0.21 | 1.17261037632623e-88 | 3.95099340199361e-84 |
70 | 0 | CnT | Connecting tubule | combined | ALDH1A1 | 216 | 402 | 1.25 | 0.75 | 0.15 | 2.86714702453848e-79 | 9.66056518447997e-75 |
70 | 0 | CnT | Connecting tubule | combined | KRT17 | 3872 | 6427 | 1.18 | 0.44 | 0.009 | 0 | 0 |
70 | 0 | CnT | Connecting tubule | combined | GATA3 | 2625 | 4172 | 1.16 | 0.6 | 0.04 | 2.11135980891504e-181 | 7.11401574015832e-177 |
70 | 0 | CnT | Connecting tubule | combined | TACSTD2 | 4070 | 11530 | 1.13 | 0.57 | 0.04 | 2.59356149584014e-160 | 8.73874610408376e-156 |
70 | 0 | CnT | Connecting tubule | combined | KRT18 | 3875 | 6430 | 1.11 | 0.89 | 0.34 | 7.12780752717275e-52 | 2.40164346820559e-47 |
70 | 0 | CnT | Connecting tubule | combined | AKR1B1 | 231 | 381 | 1.09 | 0.84 | 0.34 | 1.07693787198214e-44 | 3.62863446585662e-40 |
70 | 0 | CnT | Connecting tubule | combined | ATF3 | 467 | 785 | 1.09 | 0.83 | 0.24 | 2.10561544684378e-57 | 7.09466068659544e-53 |
70 | 0 | CnT | Connecting tubule | combined | BCAT1 | 586 | 976 | 1.04 | 0.58 | 0.04 | 2.86659724635051e-180 | 9.65871276185339e-176 |
70 | 0 | CnT | Connecting tubule | combined | KRT8 | 3856 | 6446 | 0.99 | 0.83 | 0.24 | 5.20116406052669e-56 | 1.75248021855386e-51 |
70 | 0 | CnT | Connecting tubule | combined | ELF3 | 1999 | 3318 | 0.91 | 0.75 | 0.18 | 4.39749738569264e-55 | 1.48169276913528e-50 |
70 | 0 | CnT | Connecting tubule | combined | CLDN3 | 1365 | 2045 | 0.9 | 0.79 | 0.29 | 2.31376713509215e-38 | 7.79600698497948e-34 |
70 | 0 | CnT | Connecting tubule | combined | MAL | 4118 | 6817 | 0.83 | 0.59 | 0.11 | 6.02009960332325e-56 | 2.02841236034373e-51 |
70 | 0 | CnT | Connecting tubule | combined | SH3YL1 | 26751 | 29546 | 0.82 | 0.61 | 0.14 | 2.60510689403262e-44 | 8.77764716875351e-40 |
70 | 0 | CnT | Connecting tubule | combined | MAFF | 23764 | 6780 | 0.82 | 0.74 | 0.22 | 1.35643141815086e-40 | 4.57036002031752e-36 |
70 | 0 | CnT | Connecting tubule | combined | HMGA1 | 3159 | 5010 | 0.81 | 0.94 | 0.46 | 3.07878656044863e-33 | 1.03736634367756e-28 |
70 | 0 | CnT | Connecting tubule | combined | TNFRSF12A | 51330 | 18152 | 0.78 | 0.59 | 0.13 | 6.94132837119378e-47 | 2.33881118139003e-42 |
70 | 0 | CnT | Connecting tubule | combined | CXCL3 | 2921 | 4604 | 0.75 | 0.17 | 0.02 | 1.38205436537088e-21 | 4.65669397868065e-17 |
70 | 0 | CnT | Connecting tubule | combined | TFAP2A | 7020 | 11742 | 0.75 | 0.44 | 0.02 | 2.05135361710933e-166 | 6.91183087748816e-162 |
70 | 0 | CnT | Connecting tubule | combined | SAT1 | 6303 | 10540 | 0.74 | 0.89 | 0.45 | 1.04385357069402e-29 | 3.51716022109643e-25 |
70 | 0 | CnT | Connecting tubule | combined | CRABP1 | 1381 | 2338 | 0.74 | 0.36 | 0.06 | 2.02328927494965e-42 | 6.81727088301534e-38 |
70 | 0 | CnT | Connecting tubule | combined | AGR2 | 10551 | 328 | 0.74 | 0.35 | 0.01 | 2.21373279988794e-140 | 7.45895129594243e-136 |
70 | 0 | CnT | Connecting tubule | combined | EPCAM | 4072 | 11529 | 0.74 | 0.86 | 0.43 | 5.62281167964908e-27 | 1.89455016734096e-22 |
70 | 0 | CnT | Connecting tubule | combined | TSPAN1 | 10103 | 20657 | 0.73 | 0.44 | 0.02 | 3.8619755184011e-164 | 1.30125403117007e-159 |
70 | 0 | CnT | Connecting tubule | combined | DMKN | 93099 | 25063 | 0.72 | 0.66 | 0.17 | 7.65376193443101e-45 | 2.57885854618718e-40 |
70 | 0 | CnT | Connecting tubule | combined | MYO6 | 4646 | 7605 | 0.71 | 0.67 | 0.22 | 1.22347440349953e-33 | 4.12237465515132e-29 |
70 | 0 | CnT | Connecting tubule | combined | RDH10 | 157506 | 19975 | 0.69 | 0.59 | 0.1 | 2.7757504116313e-64 | 9.3526134369505e-60 |
70 | 0 | CnT | Connecting tubule | combined | TUBB2B | 347733 | 30829 | 0.66 | 0.8 | 0.33 | 1.91922251399704e-28 | 6.46662833866161e-24 |
70 | 0 | CnT | Connecting tubule | combined | RPL28 | 6158 | 10330 | 0.65 | 0.99 | 0.92 | 1.1502900566696e-26 | 3.87578731694255e-22 |
70 | 0 | CnT | Connecting tubule | combined | KLF6 | 1316 | 2235 | 0.65 | 0.84 | 0.44 | 8.7575083818123e-24 | 2.95075487416784e-19 |
70 | 0 | CnT | Connecting tubule | combined | GSTM3 | 2947 | 4635 | 0.64 | 0.75 | 0.25 | 3.16529259371138e-34 | 1.06651368652511e-29 |
70 | 0 | CnT | Connecting tubule | combined | ENSG00000163364 | NULL | 0.64 | 0.51 | 0.09 | 9.91647111114709e-54 | 3.3412557761899e-49 | |
70 | 0 | CnT | Connecting tubule | combined | RPLP1 | 6176 | 10372 | 0.64 | 1 | 0.99 | 7.94545942309344e-42 | 2.6771430980171e-37 |
70 | 0 | CnT | Connecting tubule | combined | NFKBIA | 4792 | 7797 | 0.64 | 0.86 | 0.48 | 3.68404985455447e-20 | 1.24130375799358e-15 |
70 | 0 | CnT | Connecting tubule | combined | PHLDA1 | 22822 | 8933 | 0.64 | 0.71 | 0.24 | 7.64329403507462e-31 | 2.57533149217804e-26 |
70 | 0 | CnT | Connecting tubule | combined | SCIN | 85477 | 21695 | 0.62 | 0.48 | 0.05 | 5.26449883574518e-91 | 1.77382023771598e-86 |
70 | 0 | CnT | Connecting tubule | combined | CCN1 | 3491 | 2654 | 0.61 | 0.86 | 0.58 | 1.43175681136412e-14 | 4.82416140021027e-10 |
70 | 0 | CnT | Connecting tubule | combined | CYTOR | 112597 | 28717 | 0.61 | 0.28 | 0.02 | 1.22887357154877e-57 | 4.14056661197642e-53 |
70 | 0 | CnT | Connecting tubule | combined | STXBP6 | 29091 | 19666 | 0.6 | 0.5 | 0.05 | 1.83081103115372e-101 | 6.16873468836934e-97 |
70 | 0 | CnT | Connecting tubule | combined | RPL39 | 6170 | 10350 | 0.6 | 1 | 0.94 | 1.37186187088776e-27 | 4.62235138776923e-23 |
70 | 0 | CnT | Connecting tubule | combined | MAL2 | 114569 | 13634 | 0.59 | 0.6 | 0.19 | 3.14035092070813e-27 | 1.0581098392234e-22 |
70 | 0 | CnT | Connecting tubule | combined | MMP7 | 4316 | 7174 | 0.58 | 0.22 | 0.01 | 1.16133168458184e-55 | 3.91299097803005e-51 |
70 | 0 | CnT | Connecting tubule | combined | RPL37 | 6167 | 10347 | 0.58 | 0.98 | 0.88 | 4.34441946978989e-25 | 1.463808696151e-20 |
70 | 0 | CnT | Connecting tubule | combined | RPL36 | 25873 | 13631 | 0.57 | 0.98 | 0.85 | 1.97094073466003e-22 | 6.64088771136352e-18 |
70 | 0 | CnT | Connecting tubule | combined | ZFP36 | 7538 | 12862 | 0.57 | 0.68 | 0.23 | 3.21624995194836e-27 | 1.08368325880948e-22 |
70 | 0 | CnT | Connecting tubule | combined | KRT19 | 3880 | 6436 | 0.56 | 0.73 | 0.33 | 1.45448350858321e-18 | 4.90073673382025e-14 |
70 | 0 | CnT | Connecting tubule | combined | GGCT | 79017 | 21705 | 0.56 | 0.72 | 0.28 | 3.01467579359633e-26 | 1.01576486189435e-21 |
70 | 0 | CnT | Connecting tubule | combined | RPS27 | 6232 | 10416 | 0.56 | 1 | 0.97 | 2.69547434361795e-25 | 9.08213125338632e-21 |
70 | 0 | CnT | Connecting tubule | combined | RPS12 | 6206 | 10385 | 0.55 | 1 | 0.97 | 1.31674067473079e-28 | 4.43662602943792e-24 |
70 | 0 | CnT | Connecting tubule | combined | CLDN7 | 1366 | 2049 | 0.55 | 0.58 | 0.13 | 1.8738803672965e-43 | 6.31385250956884e-39 |
70 | 0 | CnT | Connecting tubule | combined | EMX2 | 2018 | 3341 | 0.55 | 0.63 | 0.22 | 3.13391985438342e-25 | 1.05594295573595e-20 |
70 | 0 | CnT | Connecting tubule | combined | RPS3 | 6188 | 10420 | 0.55 | 1 | 0.99 | 8.74487128123533e-45 | 2.94649692949943e-40 |
70 | 0 | CnT | Connecting tubule | combined | TBC1D9 | 23158 | 21710 | 0.54 | 0.39 | 0.04 | 1.38467074710635e-64 | 4.66550961530014e-60 |
70 | 0 | CnT | Connecting tubule | combined | S100A14 | 57402 | 18901 | 0.54 | 0.33 | 0.03 | 1.19080100322961e-71 | 4.01228490028186e-67 |
70 | 0 | CnT | Connecting tubule | combined | RPS21 | 6227 | 10409 | 0.54 | 0.99 | 0.76 | 1.77635472074978e-22 | 5.98524959609432e-18 |
70 | 0 | CnT | Connecting tubule | combined | ANXA3 | 306 | 541 | 0.54 | 0.32 | 0.04 | 2.64410554595569e-44 | 8.9090492265431e-40 |
70 | 0 | CnT | Connecting tubule | combined | RPLP2 | 6181 | 10377 | 0.53 | 1 | 0.96 | 3.32277806260478e-26 | 1.11957684041405e-21 |
70 | 0 | CnT | Connecting tubule | combined | CKS2 | 1164 | 2000 | 0.53 | 0.73 | 0.35 | 7.48614008591526e-18 | 2.52238004054829e-13 |
70 | 0 | CnT | Connecting tubule | combined | RPS18 | 6222 | 10401 | 0.53 | 1 | 0.99 | 6.60455347336014e-33 | 2.22533824731396e-28 |
70 | 0 | CnT | Connecting tubule | combined | KLF5 | 688 | 6349 | 0.53 | 0.44 | 0.08 | 1.19643646272844e-45 | 4.03127301751721e-41 |
70 | 0 | CnT | Connecting tubule | combined | LIMCH1 | 22998 | 29191 | 0.53 | 0.55 | 0.11 | 2.71970956091206e-43 | 9.16378939453708e-39 |
70 | 0 | CnT | Connecting tubule | combined | MECOM | 2122 | 3498 | 0.52 | 0.51 | 0.07 | 1.03790829207909e-68 | 3.4971281993313e-64 |
70 | 0 | CnT | Connecting tubule | combined | GATA2 | 2624 | 4171 | 0.52 | 0.31 | 0.04 | 3.15464876604107e-41 | 1.06292735522988e-36 |
70 | 0 | CnT | Connecting tubule | combined | RPL12 | 6136 | 10302 | 0.52 | 1 | 0.98 | 8.2914822577734e-34 | 2.79373203193417e-29 |
70 | 0 | CnT | Connecting tubule | combined | RPS28 | 6234 | 10418 | 0.52 | 1 | 0.93 | 6.30726386256135e-20 | 2.12516948585142e-15 |
70 | 0 | CnT | Connecting tubule | combined | SOX9 | 6662 | 11204 | 0.52 | 0.42 | 0.06 | 5.93782225201302e-50 | 2.00068982959327e-45 |
70 | 0 | CnT | Connecting tubule | combined | PCP4 | 5121 | 8742 | 0.52 | 0.34 | 0.08 | 5.35032178432779e-26 | 1.80273742201141e-21 |
70 | 0 | CnT | Connecting tubule | combined | RAB11FIP2 | 22841 | 29152 | 0.52 | 0.46 | 0.1 | 1.06866417391748e-36 | 3.60075706759756e-32 |
70 | 0 | CnT | Connecting tubule | combined | RPS19 | 6223 | 10402 | 0.51 | 1 | 0.98 | 4.31512746706335e-33 | 1.45393904875232e-28 |
70 | 0 | CnT | Connecting tubule | combined | RPS20 | 6224 | 10405 | 0.51 | 1 | 0.96 | 6.6657835013759e-28 | 2.2459690929536e-23 |
70 | 0 | CnT | Connecting tubule | combined | LMNA | 4000 | 6636 | 0.51 | 0.76 | 0.45 | 5.29643861488543e-11 | 1.7845820268995e-06 |
70 | 0 | CnT | Connecting tubule | combined | TSTD1 | 100131187 | 35410 | 0.5 | 0.72 | 0.36 | 5.84825427716796e-17 | 1.97051079614897e-12 |
70 | 0 | CnT | Connecting tubule | combined | RPS17 | 6218 | 10397 | 0.49 | 1 | 0.96 | 5.12764610400617e-24 | 1.72770907828384e-19 |
70 | 0 | CnT | Connecting tubule | combined | LHX1-DT | 102723471 | 53778 | 0.49 | 0.5 | 0.13 | 8.03260349953672e-30 | 2.7065054231339e-25 |
70 | 0 | CnT | Connecting tubule | combined | RPS14 | 6208 | 10387 | 0.48 | 1 | 0.99 | 1.51050119643969e-29 | 5.0894827312839e-25 |
70 | 0 | CnT | Connecting tubule | combined | MOXD1 | 26002 | 21063 | 0.48 | 0.52 | 0.11 | 1.07189300145048e-39 | 3.61163627908724e-35 |
70 | 0 | CnT | Connecting tubule | combined | CNKSR3 | 154043 | 23034 | 0.48 | 0.56 | 0.24 | 4.04042297191042e-15 | 1.3613801161555e-10 |
70 | 0 | CnT | Connecting tubule | combined | TBX3 | 6926 | 11602 | 0.48 | 0.38 | 0.06 | 7.50562199615068e-40 | 2.52894427538301e-35 |
70 | 0 | CnT | Connecting tubule | combined | KCTD12 | 115207 | 14678 | 0.48 | 0.36 | 0.08 | 1.00458481268487e-28 | 3.3848480678604e-24 |
70 | 0 | CnT | Connecting tubule | combined | RAB25 | 57111 | 18238 | 0.48 | 0.39 | 0.06 | 5.92624480606917e-45 | 1.99678892495694e-40 |
70 | 0 | CnT | Connecting tubule | combined | RPL32 | 6161 | 10336 | 0.47 | 1 | 0.98 | 2.7628062530674e-27 | 9.30899938908531e-23 |
70 | 0 | CnT | Connecting tubule | combined | TMEM45B | 120224 | 25194 | 0.47 | 0.3 | 0.01 | 1.47615850121976e-141 | 4.97376845400986e-137 |
70 | 0 | CnT | Connecting tubule | combined | CEBPB | 1051 | 1834 | 0.47 | 0.5 | 0.13 | 2.52034900005692e-31 | 8.49206392079177e-27 |
70 | 0 | CnT | Connecting tubule | combined | EEF1B2 | 1933 | 3208 | 0.47 | 0.98 | 0.82 | 2.91653720221725e-19 | 9.82698044915079e-15 |
70 | 0 | CnT | Connecting tubule | combined | RPL37A | 6168 | 10348 | 0.46 | 1 | 0.95 | 5.92772820503182e-20 | 1.99728874140342e-15 |
70 | 0 | CnT | Connecting tubule | combined | RPL18A | 6142 | 10311 | 0.46 | 1 | 0.98 | 1.39999465724158e-28 | 4.71714199810978e-24 |
70 | 0 | CnT | Connecting tubule | combined | TESC | 54997 | 26065 | 0.46 | 0.4 | 0.08 | 2.56574962898322e-33 | 8.64503679989608e-29 |
70 | 0 | CnT | Connecting tubule | combined | RPS10 | 6204 | 10383 | 0.46 | 1 | 0.88 | 7.83339530582219e-24 | 2.63938421434373e-19 |
70 | 0 | CnT | Connecting tubule | combined | SPINT1 | 6692 | 11246 | 0.45 | 0.47 | 0.1 | 4.78783787073757e-36 | 1.61321409216632e-31 |
70 | 0 | CnT | Connecting tubule | combined | HELLS | 3070 | 4861 | 0.45 | 0.5 | 0.18 | 5.73514229644283e-18 | 1.93239884536345e-13 |
70 | 0 | CnT | Connecting tubule | combined | RPL31 | 6160 | 10334 | 0.45 | 1 | 0.96 | 2.16536519744978e-23 | 7.2959814962873e-19 |
70 | 0 | CnT | Connecting tubule | combined | RPL8 | 6132 | 10368 | 0.45 | 1 | 0.99 | 1.31114660742528e-36 | 4.41777737905874e-32 |
70 | 0 | CnT | Connecting tubule | combined | TPD52L1 | 7164 | 12006 | 0.45 | 0.49 | 0.12 | 8.52812341720343e-32 | 2.87346590419253e-27 |
70 | 0 | CnT | Connecting tubule | combined | RPL41 | 6171 | 10354 | 0.45 | 1 | 0.99 | 9.73779227512751e-27 | 3.28105172918146e-22 |
70 | 0 | CnT | Connecting tubule | combined | RGS10 | 6001 | 9992 | 0.44 | 0.56 | 0.19 | 1.096662450178e-20 | 3.69509445962976e-16 |
70 | 0 | CnT | Connecting tubule | combined | ASCL2 | 430 | 739 | 0.44 | 0.17 | 0.01 | 1.22030553685109e-59 | 4.11169747586607e-55 |
70 | 0 | CnT | Connecting tubule | combined | PRPS2 | 5634 | 9465 | 0.44 | 0.47 | 0.09 | 2.12509369407645e-41 | 7.16029069282119e-37 |
70 | 0 | CnT | Connecting tubule | combined | HMGA2 | 8091 | 5009 | 0.44 | 0.52 | 0.29 | 7.230241185774e-08 | 0.00243615746513469 |
70 | 0 | CnT | Connecting tubule | combined | PODXL2 | 50512 | 17936 | 0.44 | 0.55 | 0.18 | 1.19898287568033e-22 | 4.03985290131732e-18 |