Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: combined
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 70 | 0 | CnT | Connecting tubule | combined | CLDN4 | 1364 | 2046 | 1.48 | 0.83 | 0.13 | 5.8540938412001E-118 | 1.9724783788539E-113 |
| 70 | 0 | CnT | Connecting tubule | combined | WFDC2 | 10406 | 15939 | 1.43 | 0.89 | 0.21 | 1.1726103763262E-88 | 3.9509934019936E-84 |
| 70 | 0 | CnT | Connecting tubule | combined | ALDH1A1 | 216 | 402 | 1.25 | 0.75 | 0.15 | 2.8671470245385E-79 | 9.66056518448E-75 |
| 70 | 0 | CnT | Connecting tubule | combined | KRT17 | 3872 | 6427 | 1.18 | 0.44 | 0.009 | 0 | 0 |
| 70 | 0 | CnT | Connecting tubule | combined | GATA3 | 2625 | 4172 | 1.16 | 0.6 | 0.04 | 2.111359808915E-181 | 7.1140157401583E-177 |
| 70 | 0 | CnT | Connecting tubule | combined | TACSTD2 | 4070 | 11530 | 1.13 | 0.57 | 0.04 | 2.5935614958401E-160 | 8.7387461040838E-156 |
| 70 | 0 | CnT | Connecting tubule | combined | KRT18 | 3875 | 6430 | 1.11 | 0.89 | 0.34 | 7.1278075271728E-52 | 2.4016434682056E-47 |
| 70 | 0 | CnT | Connecting tubule | combined | AKR1B1 | 231 | 381 | 1.09 | 0.84 | 0.34 | 1.0769378719821E-44 | 3.6286344658566E-40 |
| 70 | 0 | CnT | Connecting tubule | combined | ATF3 | 467 | 785 | 1.09 | 0.83 | 0.24 | 2.1056154468438E-57 | 7.0946606865954E-53 |
| 70 | 0 | CnT | Connecting tubule | combined | BCAT1 | 586 | 976 | 1.04 | 0.58 | 0.04 | 2.8665972463505E-180 | 9.6587127618534E-176 |
| 70 | 0 | CnT | Connecting tubule | combined | KRT8 | 3856 | 6446 | 0.99 | 0.83 | 0.24 | 5.2011640605267E-56 | 1.7524802185539E-51 |
| 70 | 0 | CnT | Connecting tubule | combined | ELF3 | 1999 | 3318 | 0.91 | 0.75 | 0.18 | 4.3974973856926E-55 | 1.4816927691353E-50 |
| 70 | 0 | CnT | Connecting tubule | combined | CLDN3 | 1365 | 2045 | 0.9 | 0.79 | 0.29 | 2.3137671350921E-38 | 7.7960069849795E-34 |
| 70 | 0 | CnT | Connecting tubule | combined | MAL | 4118 | 6817 | 0.83 | 0.59 | 0.11 | 6.0200996033232E-56 | 2.0284123603437E-51 |
| 70 | 0 | CnT | Connecting tubule | combined | SH3YL1 | 26751 | 29546 | 0.82 | 0.61 | 0.14 | 2.6051068940326E-44 | 8.7776471687535E-40 |
| 70 | 0 | CnT | Connecting tubule | combined | MAFF | 23764 | 6780 | 0.82 | 0.74 | 0.22 | 1.3564314181509E-40 | 4.5703600203175E-36 |
| 70 | 0 | CnT | Connecting tubule | combined | HMGA1 | 3159 | 5010 | 0.81 | 0.94 | 0.46 | 3.0787865604486E-33 | 1.0373663436776E-28 |
| 70 | 0 | CnT | Connecting tubule | combined | TNFRSF12A | 51330 | 18152 | 0.78 | 0.59 | 0.13 | 6.9413283711938E-47 | 2.33881118139E-42 |
| 70 | 0 | CnT | Connecting tubule | combined | CXCL3 | 2921 | 4604 | 0.75 | 0.17 | 0.02 | 1.3820543653709E-21 | 4.6566939786807E-17 |
| 70 | 0 | CnT | Connecting tubule | combined | TFAP2A | 7020 | 11742 | 0.75 | 0.44 | 0.02 | 2.0513536171093E-166 | 6.9118308774882E-162 |
| 70 | 0 | CnT | Connecting tubule | combined | SAT1 | 6303 | 10540 | 0.74 | 0.89 | 0.45 | 1.043853570694E-29 | 3.5171602210964E-25 |
| 70 | 0 | CnT | Connecting tubule | combined | CRABP1 | 1381 | 2338 | 0.74 | 0.36 | 0.06 | 2.0232892749497E-42 | 6.8172708830153E-38 |
| 70 | 0 | CnT | Connecting tubule | combined | AGR2 | 10551 | 328 | 0.74 | 0.35 | 0.01 | 2.2137327998879E-140 | 7.4589512959424E-136 |
| 70 | 0 | CnT | Connecting tubule | combined | EPCAM | 4072 | 11529 | 0.74 | 0.86 | 0.43 | 5.6228116796491E-27 | 1.894550167341E-22 |
| 70 | 0 | CnT | Connecting tubule | combined | TSPAN1 | 10103 | 20657 | 0.73 | 0.44 | 0.02 | 3.8619755184011E-164 | 1.3012540311701E-159 |
| 70 | 0 | CnT | Connecting tubule | combined | DMKN | 93099 | 25063 | 0.72 | 0.66 | 0.17 | 7.653761934431E-45 | 2.5788585461872E-40 |
| 70 | 0 | CnT | Connecting tubule | combined | MYO6 | 4646 | 7605 | 0.71 | 0.67 | 0.22 | 1.2234744034995E-33 | 4.1223746551513E-29 |
| 70 | 0 | CnT | Connecting tubule | combined | RDH10 | 157506 | 19975 | 0.69 | 0.59 | 0.1 | 2.7757504116313E-64 | 9.3526134369505E-60 |
| 70 | 0 | CnT | Connecting tubule | combined | TUBB2B | 347733 | 30829 | 0.66 | 0.8 | 0.33 | 1.919222513997E-28 | 6.4666283386616E-24 |
| 70 | 0 | CnT | Connecting tubule | combined | RPL28 | 6158 | 10330 | 0.65 | 0.99 | 0.92 | 1.1502900566696E-26 | 3.8757873169426E-22 |
| 70 | 0 | CnT | Connecting tubule | combined | KLF6 | 1316 | 2235 | 0.65 | 0.84 | 0.44 | 8.7575083818123E-24 | 2.9507548741678E-19 |
| 70 | 0 | CnT | Connecting tubule | combined | GSTM3 | 2947 | 4635 | 0.64 | 0.75 | 0.25 | 3.1652925937114E-34 | 1.0665136865251E-29 |
| 70 | 0 | CnT | Connecting tubule | combined | ENSG00000163364 | NULL | 0.64 | 0.51 | 0.09 | 9.9164711111471E-54 | 3.3412557761899E-49 | |
| 70 | 0 | CnT | Connecting tubule | combined | RPLP1 | 6176 | 10372 | 0.64 | 1 | 0.99 | 7.9454594230934E-42 | 2.6771430980171E-37 |
| 70 | 0 | CnT | Connecting tubule | combined | NFKBIA | 4792 | 7797 | 0.64 | 0.86 | 0.48 | 3.6840498545545E-20 | 1.2413037579936E-15 |
| 70 | 0 | CnT | Connecting tubule | combined | PHLDA1 | 22822 | 8933 | 0.64 | 0.71 | 0.24 | 7.6432940350746E-31 | 2.575331492178E-26 |
| 70 | 0 | CnT | Connecting tubule | combined | SCIN | 85477 | 21695 | 0.62 | 0.48 | 0.05 | 5.2644988357452E-91 | 1.773820237716E-86 |
| 70 | 0 | CnT | Connecting tubule | combined | CCN1 | 3491 | 2654 | 0.61 | 0.86 | 0.58 | 1.4317568113641E-14 | 4.8241614002103E-10 |
| 70 | 0 | CnT | Connecting tubule | combined | CYTOR | 112597 | 28717 | 0.61 | 0.28 | 0.02 | 1.2288735715488E-57 | 4.1405666119764E-53 |
| 70 | 0 | CnT | Connecting tubule | combined | STXBP6 | 29091 | 19666 | 0.6 | 0.5 | 0.05 | 1.8308110311537E-101 | 6.1687346883693E-97 |
| 70 | 0 | CnT | Connecting tubule | combined | RPL39 | 6170 | 10350 | 0.6 | 1 | 0.94 | 1.3718618708878E-27 | 4.6223513877692E-23 |
| 70 | 0 | CnT | Connecting tubule | combined | MAL2 | 114569 | 13634 | 0.59 | 0.6 | 0.19 | 3.1403509207081E-27 | 1.0581098392234E-22 |
| 70 | 0 | CnT | Connecting tubule | combined | MMP7 | 4316 | 7174 | 0.58 | 0.22 | 0.01 | 1.1613316845818E-55 | 3.9129909780301E-51 |
| 70 | 0 | CnT | Connecting tubule | combined | RPL37 | 6167 | 10347 | 0.58 | 0.98 | 0.88 | 4.3444194697899E-25 | 1.463808696151E-20 |
| 70 | 0 | CnT | Connecting tubule | combined | RPL36 | 25873 | 13631 | 0.57 | 0.98 | 0.85 | 1.97094073466E-22 | 6.6408877113635E-18 |
| 70 | 0 | CnT | Connecting tubule | combined | ZFP36 | 7538 | 12862 | 0.57 | 0.68 | 0.23 | 3.2162499519484E-27 | 1.0836832588095E-22 |
| 70 | 0 | CnT | Connecting tubule | combined | KRT19 | 3880 | 6436 | 0.56 | 0.73 | 0.33 | 1.4544835085832E-18 | 4.9007367338203E-14 |
| 70 | 0 | CnT | Connecting tubule | combined | GGCT | 79017 | 21705 | 0.56 | 0.72 | 0.28 | 3.0146757935963E-26 | 1.0157648618944E-21 |
| 70 | 0 | CnT | Connecting tubule | combined | RPS27 | 6232 | 10416 | 0.56 | 1 | 0.97 | 2.695474343618E-25 | 9.0821312533863E-21 |
| 70 | 0 | CnT | Connecting tubule | combined | RPS12 | 6206 | 10385 | 0.55 | 1 | 0.97 | 1.3167406747308E-28 | 4.4366260294379E-24 |
| 70 | 0 | CnT | Connecting tubule | combined | CLDN7 | 1366 | 2049 | 0.55 | 0.58 | 0.13 | 1.8738803672965E-43 | 6.3138525095688E-39 |
| 70 | 0 | CnT | Connecting tubule | combined | EMX2 | 2018 | 3341 | 0.55 | 0.63 | 0.22 | 3.1339198543834E-25 | 1.055942955736E-20 |
| 70 | 0 | CnT | Connecting tubule | combined | RPS3 | 6188 | 10420 | 0.55 | 1 | 0.99 | 8.7448712812353E-45 | 2.9464969294994E-40 |
| 70 | 0 | CnT | Connecting tubule | combined | TBC1D9 | 23158 | 21710 | 0.54 | 0.39 | 0.04 | 1.3846707471064E-64 | 4.6655096153001E-60 |
| 70 | 0 | CnT | Connecting tubule | combined | S100A14 | 57402 | 18901 | 0.54 | 0.33 | 0.03 | 1.1908010032296E-71 | 4.0122849002819E-67 |
| 70 | 0 | CnT | Connecting tubule | combined | RPS21 | 6227 | 10409 | 0.54 | 0.99 | 0.76 | 1.7763547207498E-22 | 5.9852495960943E-18 |
| 70 | 0 | CnT | Connecting tubule | combined | ANXA3 | 306 | 541 | 0.54 | 0.32 | 0.04 | 2.6441055459557E-44 | 8.9090492265431E-40 |
| 70 | 0 | CnT | Connecting tubule | combined | RPLP2 | 6181 | 10377 | 0.53 | 1 | 0.96 | 3.3227780626048E-26 | 1.119576840414E-21 |
| 70 | 0 | CnT | Connecting tubule | combined | CKS2 | 1164 | 2000 | 0.53 | 0.73 | 0.35 | 7.4861400859153E-18 | 2.5223800405483E-13 |
| 70 | 0 | CnT | Connecting tubule | combined | RPS18 | 6222 | 10401 | 0.53 | 1 | 0.99 | 6.6045534733601E-33 | 2.225338247314E-28 |
| 70 | 0 | CnT | Connecting tubule | combined | KLF5 | 688 | 6349 | 0.53 | 0.44 | 0.08 | 1.1964364627284E-45 | 4.0312730175172E-41 |
| 70 | 0 | CnT | Connecting tubule | combined | LIMCH1 | 22998 | 29191 | 0.53 | 0.55 | 0.11 | 2.7197095609121E-43 | 9.1637893945371E-39 |
| 70 | 0 | CnT | Connecting tubule | combined | MECOM | 2122 | 3498 | 0.52 | 0.51 | 0.07 | 1.0379082920791E-68 | 3.4971281993313E-64 |
| 70 | 0 | CnT | Connecting tubule | combined | GATA2 | 2624 | 4171 | 0.52 | 0.31 | 0.04 | 3.1546487660411E-41 | 1.0629273552299E-36 |
| 70 | 0 | CnT | Connecting tubule | combined | RPL12 | 6136 | 10302 | 0.52 | 1 | 0.98 | 8.2914822577734E-34 | 2.7937320319342E-29 |
| 70 | 0 | CnT | Connecting tubule | combined | RPS28 | 6234 | 10418 | 0.52 | 1 | 0.93 | 6.3072638625613E-20 | 2.1251694858514E-15 |
| 70 | 0 | CnT | Connecting tubule | combined | SOX9 | 6662 | 11204 | 0.52 | 0.42 | 0.06 | 5.937822252013E-50 | 2.0006898295933E-45 |
| 70 | 0 | CnT | Connecting tubule | combined | PCP4 | 5121 | 8742 | 0.52 | 0.34 | 0.08 | 5.3503217843278E-26 | 1.8027374220114E-21 |
| 70 | 0 | CnT | Connecting tubule | combined | RAB11FIP2 | 22841 | 29152 | 0.52 | 0.46 | 0.1 | 1.0686641739175E-36 | 3.6007570675976E-32 |
| 70 | 0 | CnT | Connecting tubule | combined | RPS19 | 6223 | 10402 | 0.51 | 1 | 0.98 | 4.3151274670634E-33 | 1.4539390487523E-28 |
| 70 | 0 | CnT | Connecting tubule | combined | RPS20 | 6224 | 10405 | 0.51 | 1 | 0.96 | 6.6657835013759E-28 | 2.2459690929536E-23 |
| 70 | 0 | CnT | Connecting tubule | combined | LMNA | 4000 | 6636 | 0.51 | 0.76 | 0.45 | 5.2964386148854E-11 | 1.7845820268995E-6 |
| 70 | 0 | CnT | Connecting tubule | combined | TSTD1 | 100131187 | 35410 | 0.5 | 0.72 | 0.36 | 5.848254277168E-17 | 1.970510796149E-12 |
| 70 | 0 | CnT | Connecting tubule | combined | RPS17 | 6218 | 10397 | 0.49 | 1 | 0.96 | 5.1276461040062E-24 | 1.7277090782838E-19 |
| 70 | 0 | CnT | Connecting tubule | combined | LHX1-DT | 102723471 | 53778 | 0.49 | 0.5 | 0.13 | 8.0326034995367E-30 | 2.7065054231339E-25 |
| 70 | 0 | CnT | Connecting tubule | combined | RPS14 | 6208 | 10387 | 0.48 | 1 | 0.99 | 1.5105011964397E-29 | 5.0894827312839E-25 |
| 70 | 0 | CnT | Connecting tubule | combined | MOXD1 | 26002 | 21063 | 0.48 | 0.52 | 0.11 | 1.0718930014505E-39 | 3.6116362790872E-35 |
| 70 | 0 | CnT | Connecting tubule | combined | CNKSR3 | 154043 | 23034 | 0.48 | 0.56 | 0.24 | 4.0404229719104E-15 | 1.3613801161555E-10 |
| 70 | 0 | CnT | Connecting tubule | combined | TBX3 | 6926 | 11602 | 0.48 | 0.38 | 0.06 | 7.5056219961507E-40 | 2.528944275383E-35 |
| 70 | 0 | CnT | Connecting tubule | combined | KCTD12 | 115207 | 14678 | 0.48 | 0.36 | 0.08 | 1.0045848126849E-28 | 3.3848480678604E-24 |
| 70 | 0 | CnT | Connecting tubule | combined | RAB25 | 57111 | 18238 | 0.48 | 0.39 | 0.06 | 5.9262448060692E-45 | 1.9967889249569E-40 |
| 70 | 0 | CnT | Connecting tubule | combined | RPL32 | 6161 | 10336 | 0.47 | 1 | 0.98 | 2.7628062530674E-27 | 9.3089993890853E-23 |
| 70 | 0 | CnT | Connecting tubule | combined | TMEM45B | 120224 | 25194 | 0.47 | 0.3 | 0.01 | 1.4761585012198E-141 | 4.9737684540099E-137 |
| 70 | 0 | CnT | Connecting tubule | combined | CEBPB | 1051 | 1834 | 0.47 | 0.5 | 0.13 | 2.5203490000569E-31 | 8.4920639207918E-27 |
| 70 | 0 | CnT | Connecting tubule | combined | EEF1B2 | 1933 | 3208 | 0.47 | 0.98 | 0.82 | 2.9165372022173E-19 | 9.8269804491508E-15 |
| 70 | 0 | CnT | Connecting tubule | combined | RPL37A | 6168 | 10348 | 0.46 | 1 | 0.95 | 5.9277282050318E-20 | 1.9972887414034E-15 |
| 70 | 0 | CnT | Connecting tubule | combined | RPL18A | 6142 | 10311 | 0.46 | 1 | 0.98 | 1.3999946572416E-28 | 4.7171419981098E-24 |
| 70 | 0 | CnT | Connecting tubule | combined | TESC | 54997 | 26065 | 0.46 | 0.4 | 0.08 | 2.5657496289832E-33 | 8.6450367998961E-29 |
| 70 | 0 | CnT | Connecting tubule | combined | RPS10 | 6204 | 10383 | 0.46 | 1 | 0.88 | 7.8333953058222E-24 | 2.6393842143437E-19 |
| 70 | 0 | CnT | Connecting tubule | combined | SPINT1 | 6692 | 11246 | 0.45 | 0.47 | 0.1 | 4.7878378707376E-36 | 1.6132140921663E-31 |
| 70 | 0 | CnT | Connecting tubule | combined | HELLS | 3070 | 4861 | 0.45 | 0.5 | 0.18 | 5.7351422964428E-18 | 1.9323988453635E-13 |
| 70 | 0 | CnT | Connecting tubule | combined | RPL31 | 6160 | 10334 | 0.45 | 1 | 0.96 | 2.1653651974498E-23 | 7.2959814962873E-19 |
| 70 | 0 | CnT | Connecting tubule | combined | RPL8 | 6132 | 10368 | 0.45 | 1 | 0.99 | 1.3111466074253E-36 | 4.4177773790587E-32 |
| 70 | 0 | CnT | Connecting tubule | combined | TPD52L1 | 7164 | 12006 | 0.45 | 0.49 | 0.12 | 8.5281234172034E-32 | 2.8734659041925E-27 |
| 70 | 0 | CnT | Connecting tubule | combined | RPL41 | 6171 | 10354 | 0.45 | 1 | 0.99 | 9.7377922751275E-27 | 3.2810517291815E-22 |
| 70 | 0 | CnT | Connecting tubule | combined | RGS10 | 6001 | 9992 | 0.44 | 0.56 | 0.19 | 1.096662450178E-20 | 3.6950944596298E-16 |
| 70 | 0 | CnT | Connecting tubule | combined | ASCL2 | 430 | 739 | 0.44 | 0.17 | 0.01 | 1.2203055368511E-59 | 4.1116974758661E-55 |
| 70 | 0 | CnT | Connecting tubule | combined | PRPS2 | 5634 | 9465 | 0.44 | 0.47 | 0.09 | 2.1250936940764E-41 | 7.1602906928212E-37 |
| 70 | 0 | CnT | Connecting tubule | combined | HMGA2 | 8091 | 5009 | 0.44 | 0.52 | 0.29 | 7.230241185774E-8 | 0.0024361574651347 |
| 70 | 0 | CnT | Connecting tubule | combined | PODXL2 | 50512 | 17936 | 0.44 | 0.55 | 0.18 | 1.1989828756803E-22 | 4.0398529013173E-18 |