Marker Genes
Dataset: Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding
- tissue: Brain
- ontology: Brain
- genotype: C57BL/6 x DBA/2
- stage:
- treatment condition: WT
- cell/nucleus: Nuclei
- pmid: 29545511
- subset name: all
- total genes: Not reported
- clustering: Jaccard-Louvain
- pseudotime: t-SNE
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE110823
Rows:50
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Satb2 | 212712 | 2679336 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Pantr1 | 66297 | 1913547 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Frmd4b | 232288 | 2141794 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Hs6st2 | 50786 | 1354959 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Adamts3 | 330119 | 3045353 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Mpped1 | 223726 | 106316 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Gm26871 | 102634933 | 5477365 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Ccbe1 | 320924 | 2445053 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Unc5d | 210801 | 2389364 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Plxna4 | 243743 | 2179061 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Ptprk | 19272 | 103310 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Epha3 | 13837 | 99612 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Mir100hg | 73144 | 1920394 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Aff2 | 14266 | 1202294 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Vav3 | 57257 | 1888518 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Gramd1b | 235283 | 1925037 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Cux2 | 13048 | 107321 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Dok6 | 623279 | 3639495 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Pam | 18484 | 97475 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Clstn2 | 64085 | 1929897 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Ttc28 | 209683 | 2140873 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Itpr1 | 16438 | 96623 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Galnt17 | 212996 | 2137594 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Plekha5 | 109135 | 1923802 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Khdrbs2 | 170771 | 2159649 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Tiam2 | 24001 | 1344338 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Plxna2 | 18845 | 107684 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Dab1 | 13131 | 108554 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Clmp | 71566 | 1918816 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Meis2 | 17536 | 108564 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Bcl11a | 14025 | 106190 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Dok5 | 76829 | 1924079 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Luzp2 | 233271 | 1889615 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | 5730522E02Rik | 70626 | 1917876 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Slit2 | 20563 | 1315205 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Rbfox1 | 268859 | 1926224 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Ppfia2 | 327814 | 2443834 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Frmd4a | 209630 | 1919850 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Btbd11 | 74007 | 1921257 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Hivep3 | 16656 | 106589 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Kif26b | 269152 | 2447076 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Fam135b | 70363 | 1917613 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Mir99ahg | 77994 | 1919929 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Mef2c | 17260 | 99458 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Trim2 | 80890 | 1933163 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Cblb | 208650 | 2146430 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Adgrl2 | 99633 | 2139714 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Nfix | 18032 | 97311 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Robo2 | 268902 | 1890110 | ||||||
| 69 | 8 | Cortex Layer 4 Pyramidal - Wnt5b | all | Gria2 | 14800 | 95809 |