Marker Genes
Dataset: Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding
- tissue: Brain
- ontology: Brain
- genotype: C57BL/6 x DBA/2
- stage:
- treatment condition: WT
- cell/nucleus: Nuclei
- pmid: 29545511
- subset name: all
- total genes: Not reported
- clustering: Jaccard-Louvain
- pseudotime: t-SNE
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE110823
Rows:50
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69 | 70 | Astrocyte - Gfap | all | Gfap | 14580 | 95697 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Ctnna3 | 216033 | 2661445 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Pgm5 | 226041 | 1925668 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Aqp4 | 11829 | 107387 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Col23a1 | 237759 | 2653243 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Pdgfd | 71785 | 1919035 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Shroom3 | 27428 | 1351655 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Tnc | 21923 | 101922 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Apoe | 11816 | 88057 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Arhgef4 | 226970 | 2442507 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Svep1 | 64817 | 1928849 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Sparcl1 | 13602 | 108110 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Slc39a12 | 277468 | 2139274 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Lifr | 16880 | 96788 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Rfx4 | 71137 | 1918387 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Bmpr1b | 12167 | 107191 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Adamts9 | 101401 | 1916320 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Hepacam | 72927 | 1920177 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Pax3 | 18505 | 97487 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Plce1 | 74055 | 1921305 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Ednrb | 13618 | 102720 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Kank1 | 107351 | 2147707 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Aldh1l1 | 107747 | 1340024 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Phyhipl | 70911 | 1918161 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Ncan | 13004 | 104694 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Arhgef26 | 622434 | 1918053 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Glis3 | 226075 | 2444289 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Bcan | 12032 | 1096385 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Notch1 | 18128 | 97363 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Pdzrn3 | 55983 | 1933157 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Slc6a11 | 243616 | 95630 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Daam2 | 76441 | 1923691 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Vcl | 22330 | 98927 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Scd2 | 20250 | 98240 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Rgma | 244058 | 2679262 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Tcf7l1 | 21415 | 1202876 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Palld | 72333 | 1919583 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Itpkb | 320404 | 109235 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Glud1 | 14661 | 95753 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Lrig1 | 16206 | 107935 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Ccdc136 | 232664 | 1918128 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Igsf11 | 207683 | 2388477 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Slc4a4 | 54403 | 1927555 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Eepd1 | 67484 | 1914734 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Ttyh1 | 57776 | 1889007 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Abca1 | 11303 | 99607 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Itga6 | 16403 | 96605 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Pard3b | 72823 | 1919301 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Fbxl7 | 448987 | 3052506 | ||||||
| 69 | 70 | Astrocyte - Gfap | all | Antxr1 | 69538 | 1916788 |