Marker Genes
Dataset: Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding
- tissue: Brain
- ontology: Brain
- genotype: C57BL/6 x DBA/2
- stage:
- treatment condition: WT
- cell/nucleus: Nuclei
- pmid: 29545511
- subset name: all
- total genes: Not reported
- clustering: Jaccard-Louvain
- pseudotime: t-SNE
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE110823
Rows:50
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Met | 17295 | 96969 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Pdzrn3 | 55983 | 1933157 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Mlip | 69642 | 1916892 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Kctd16 | 383348 | 1914659 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | 6530403H02Rik | 320739 | 2444638 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Cacng3 | 54376 | 1859165 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Mef2c | 17260 | 99458 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Tafa1 | 320265 | 2443695 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Rgs6 | 50779 | 1354730 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Gm15155 | 102639025 | 3642241 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Cfap54 | 380654 | 1922208 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Camk2a | 12322 | 88256 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Pdzrn4 | 239618 | 3056996 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Ccbe1 | 320924 | 2445053 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Satb2 | 212712 | 2679336 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Kcnh5 | 238271 | 3584508 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Fmn1 | 14260 | 101815 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Gpc6 | 23888 | 1346322 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Myrip | 245049 | 2384407 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Gda | 14544 | 95678 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Cacna1i | 239556 | 2178051 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Pde2a | 207728 | 2446107 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Nwd2 | 319807 | 1920464 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Pde1a | 18573 | 1201792 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Kcnip4 | 80334 | 1933131 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Cux2 | 13048 | 107321 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Ildr2 | 100039795 | 1196370 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Rfx3 | 19726 | 106582 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Lrrtm4 | 243499 | 2389180 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Dok5 | 76829 | 1924079 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Cpne8 | 66871 | 1914121 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Klhl1 | 93688 | 2136335 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Sptbn2 | 20743 | 1313261 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Necab1 | 69352 | 1916602 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Cdh6 | 12563 | 107435 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Osbpl10 | 74486 | 1921736 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Dlgap2 | 244310 | 2443181 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Asic2 | 11418 | 1100867 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Atp2b4 | 381290 | 88111 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Dmtn | 13829 | 99670 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Actr3b | 242894 | 2661120 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Slit3 | 20564 | 1315202 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Cntn3 | 18488 | 99534 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Ptprk | 19272 | 103310 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Cap2 | 67252 | 1914502 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Mical2 | 320878 | 2444947 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Trpc4 | 22066 | 109525 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Plec | 18810 | 1277961 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Lncpint | 232685 | 2673128 | ||||||
| 69 | 7 | Cortex Layer 2/Layer 3 Pyramidal Met | all | Grin2a | 14811 | 95820 |