Marker Genes
Dataset: Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding
- tissue: Brain
- ontology: Brain
- genotype: C57BL/6 x DBA/2
- stage:
- treatment condition: WT
- cell/nucleus: Nuclei
- pmid: 29545511
- subset name: all
- total genes: Not reported
- clustering: Jaccard-Louvain
- pseudotime: t-SNE
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE110823
Rows:50
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69 | 69 | Astrocyte - Prdm16 | all | Tnc | 21923 | 101922 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Prdm16 | 70673 | 1917923 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Aldh1l1 | 107747 | 1340024 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Nwd1 | 319555 | 2442268 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Slc1a3 | 20512 | 99917 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Ptprz1 | 19283 | 97816 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Palld | 72333 | 1919583 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Plpp3 | 67916 | 1915166 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Gli3 | 14634 | 95729 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Rfx4 | 71137 | 1918387 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Slc1a2 | 20511 | 101931 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Egfr | 13649 | 95294 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Lrig1 | 16206 | 107935 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Abca1 | 11303 | 99607 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Rgs20 | 58175 | 1929866 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Arhgef26 | 622434 | 1918053 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Paqr8 | 74229 | 1921479 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Slc6a11 | 243616 | 95630 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Bmpr1b | 12167 | 107191 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Tcf7l1 | 21415 | 1202876 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Rgma | 244058 | 2679262 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Ptn | 19242 | 97804 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Sparcl1 | 13602 | 108110 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Arhgef4 | 226970 | 2442507 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Plce1 | 74055 | 1921305 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Grm3 | 108069 | 1351340 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Sfxn5 | 94282 | 2137681 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Gm3764 | 100042277 | 3781938 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Atp1a2 | 98660 | 88106 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Pard3b | 72823 | 1919301 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Ncan | 13004 | 104694 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Dock1 | 330662 | 2429765 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Gli2 | 14633 | 95728 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Tspan7 | 21912 | 1298407 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Npas3 | 27386 | 1351610 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Trim9 | 94090 | 2137354 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Glis3 | 226075 | 2444289 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Arap2 | 212285 | 2684416 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Glud1 | 14661 | 95753 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Nhsl1 | 215819 | 106390 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Myo6 | 17920 | 104785 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Bcl2 | 12043 | 88138 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Ttyh1 | 57776 | 1889007 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Phyhipl | 70911 | 1918161 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Cpe | 12876 | 101932 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Luzp2 | 233271 | 1889615 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Mir9-3hg | 101694 | 2142071 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Fars2 | 69955 | 1917205 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Slc4a4 | 54403 | 1927555 | ||||||
| 69 | 69 | Astrocyte - Prdm16 | all | Kank1 | 107351 | 2147707 |