Marker Genes
Dataset: Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding
- tissue: Brain
- ontology: Brain
- genotype: C57BL/6 x DBA/2
- stage:
- treatment condition: WT
- cell/nucleus: Nuclei
- pmid: 29545511
- subset name: all
- total genes: Not reported
- clustering: Jaccard-Louvain
- pseudotime: t-SNE
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE110823
Rows:50
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Slc6a13 | 14412 | 95629 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Slc6a20a | 102680 | 2143217 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Ranbp3l | 223332 | 2444654 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Aldh1a2 | 19378 | 107928 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Col3a1 | 12825 | 88453 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Igf2 | 16002 | 96434 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Col1a2 | 12843 | 88468 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Cped1 | 214642 | 2444814 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Col1a1 | 12842 | 88467 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Col4a6 | 94216 | 2152695 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Bmp6 | 12161 | 88182 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Cp | 12870 | 88476 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Lepr | 16847 | 104993 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Cfh | 12628 | 88385 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Adamts12 | 239337 | 2146046 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Lrrk1 | 233328 | 2142227 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Itih5 | 209378 | 1925751 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Slc7a11 | 26570 | 1347355 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | 4930594M22Rik | 105245866 | 1925478 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Arhgap29 | 214137 | 2443818 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Colec12 | 140792 | 2152907 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Col4a5 | 12830 | 88456 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Lama2 | 16773 | 99912 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Uaca | 72565 | 1919815 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Sned1 | 208777 | 3045960 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Bicc1 | 83675 | 1933388 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Cgnl1 | 68178 | 1915428 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Lama1 | 16772 | 99892 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Lpar1 | 14745 | 108429 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Dock6 | 319899 | 1914789 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Eya2 | 14049 | 109341 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Arhgap28 | 268970 | 2147003 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Adam12 | 11489 | 105378 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Nid1 | 18073 | 97342 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Atp1a2 | 98660 | 88106 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Sidt1 | 320007 | 2443155 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Lrmda | 76633 | 1923883 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Gpc3 | 14734 | 104903 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Phldb2 | 208177 | 2444981 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Ptpn13 | 19249 | 103293 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Eya1 | 14048 | 109344 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Col26a1 | 140709 | 2155345 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Svil | 225115 | 2147319 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Wls | 68151 | 1915401 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Lama4 | 16775 | 109321 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Hlf | 217082 | 96108 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Bnc2 | 242509 | 2443805 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Lhfpl2 | 218454 | 2145236 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Tgfbr3 | 21814 | 104637 | ||||||
| 69 | 66 | Vascular and Leptomeningeal Cell2 | all | Col4a1 | 12826 | 88454 |