Marker Genes
Dataset: Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding
- tissue: Brain
- ontology: Brain
- genotype: C57BL/6 x DBA/2
- stage:
- treatment condition: WT
- cell/nucleus: Nuclei
- pmid: 29545511
- subset name: all
- total genes: Not reported
- clustering: Jaccard-Louvain
- pseudotime: t-SNE
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE110823
Rows:50
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69 | 63 | Microglia | all | Ly86 | 17084 | 1321404 | ||||||
| 69 | 63 | Microglia | all | Siglech | 233274 | 2443256 | ||||||
| 69 | 63 | Microglia | all | Vav1 | 22324 | 98923 | ||||||
| 69 | 63 | Microglia | all | Csf1r | 12978 | 1339758 | ||||||
| 69 | 63 | Microglia | all | Cyth4 | 72318 | 2441702 | ||||||
| 69 | 63 | Microglia | all | Fcrls | 80891 | 1933397 | ||||||
| 69 | 63 | Microglia | all | Dock2 | 94176 | 2149010 | ||||||
| 69 | 63 | Microglia | all | Hpgds | 54486 | 1859384 | ||||||
| 69 | 63 | Microglia | all | Runx1 | 12394 | 99852 | ||||||
| 69 | 63 | Microglia | all | Ccr5 | 12774 | 107182 | ||||||
| 69 | 63 | Microglia | all | Inpp5d | 16331 | 107357 | ||||||
| 69 | 63 | Microglia | all | Itgam | 16409 | 96607 | ||||||
| 69 | 63 | Microglia | all | Adgre1 | 13733 | 106912 | ||||||
| 69 | 63 | Microglia | all | Ptprc | 19264 | 97810 | ||||||
| 69 | 63 | Microglia | all | Nckap1l | 105855 | 1926063 | ||||||
| 69 | 63 | Microglia | all | Myo1f | 17916 | 107711 | ||||||
| 69 | 63 | Microglia | all | Fyb | 23880 | 1346327 | ||||||
| 69 | 63 | Microglia | all | Cx3cr1 | 13051 | 1333815 | ||||||
| 69 | 63 | Microglia | all | Dock8 | 76088 | 1921396 | ||||||
| 69 | 63 | Microglia | all | Apbb1ip | 54519 | 1861354 | ||||||
| 69 | 63 | Microglia | all | Lcp2 | 16822 | 1321402 | ||||||
| 69 | 63 | Microglia | all | P2ry12 | 70839 | 1918089 | ||||||
| 69 | 63 | Microglia | all | Adap2 | 216991 | 2663075 | ||||||
| 69 | 63 | Microglia | all | Ikzf1 | 22778 | 1342540 | ||||||
| 69 | 63 | Microglia | all | Pik3ap1 | 83490 | 1933177 | ||||||
| 69 | 63 | Microglia | all | Slco2b1 | 101488 | 1351872 | ||||||
| 69 | 63 | Microglia | all | Tbxas1 | 21391 | 98497 | ||||||
| 69 | 63 | Microglia | all | Hexb | 15212 | 96074 | ||||||
| 69 | 63 | Microglia | all | Rasgrp3 | 240168 | 3028579 | ||||||
| 69 | 63 | Microglia | all | Fli1 | 14247 | 95554 | ||||||
| 69 | 63 | Microglia | all | Abca9 | 217262 | 2386796 | ||||||
| 69 | 63 | Microglia | all | Lyn | 17096 | 96892 | ||||||
| 69 | 63 | Microglia | all | Lgmn | 19141 | 1330838 | ||||||
| 69 | 63 | Microglia | all | Lrmda | 76633 | 1923883 | ||||||
| 69 | 63 | Microglia | all | Itgb5 | 16419 | 96614 | ||||||
| 69 | 63 | Microglia | all | Tgfbr2 | 21813 | 98729 | ||||||
| 69 | 63 | Microglia | all | Mertk | 17289 | 96965 | ||||||
| 69 | 63 | Microglia | all | Pros1 | 19128 | 1095733 | ||||||
| 69 | 63 | Microglia | all | Entpd1 | 12495 | 102805 | ||||||
| 69 | 63 | Microglia | all | Sirpa | 19261 | 108563 | ||||||
| 69 | 63 | Microglia | all | Ctsb | 13030 | 88561 | ||||||
| 69 | 63 | Microglia | all | Skap2 | 54353 | 1889206 | ||||||
| 69 | 63 | Microglia | all | Zfp710 | 209225 | 1921747 | ||||||
| 69 | 63 | Microglia | all | Lpcat2 | 270084 | 3606214 | ||||||
| 69 | 63 | Microglia | all | 0610040J01Rik | 76261 | 1923511 | ||||||
| 69 | 63 | Microglia | all | Tgfbr1 | 21812 | 98728 | ||||||
| 69 | 63 | Microglia | all | Serinc3 | 26943 | 1349457 | ||||||
| 69 | 63 | Microglia | all | Bmp2k | 140780 | 2155456 | ||||||
| 69 | 63 | Microglia | all | Rreb1 | 68750 | 2443664 | ||||||
| 69 | 63 | Microglia | all | Arsb | 11881 | 88075 |