Marker Genes
Dataset: Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding
- tissue: Brain
- ontology: Brain
- genotype: C57BL/6 x DBA/2
- stage:
- treatment condition: WT
- cell/nucleus: Nuclei
- pmid: 29545511
- subset name: all
- total genes: Not reported
- clustering: Jaccard-Louvain
- pseudotime: t-SNE
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE110823
Rows:50
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69 | 62 | Perivivascular Macrophage | all | F13a1 | 74145 | 1921395 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Mrc1 | 17533 | 97142 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Stab1 | 192187 | 2178742 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Ddx60 | 234311 | 2384570 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Cmah | 12763 | 103227 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Aoah | 27052 | 1350928 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Adgre1 | 13733 | 106912 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Dab2 | 13132 | 109175 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Fyb | 23880 | 1346327 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Rbm47 | 245945 | 2384294 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Unc93b1 | 54445 | 1859307 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Hpgds | 54486 | 1859384 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Bank1 | 242248 | 2442120 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Csf1r | 12978 | 1339758 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Ehd4 | 98878 | 1919619 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Cd84 | 12523 | 1336885 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Wdfy4 | 545030 | 3584510 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Pik3ap1 | 83490 | 1933177 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Runx1 | 12394 | 99852 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Dock2 | 94176 | 2149010 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Cfh | 12628 | 88385 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Fli1 | 14247 | 95554 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Tnfrsf11a | 21934 | 1314891 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Dock8 | 76088 | 1921396 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | P2ry12 | 70839 | 1918089 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Abca9 | 217262 | 2386796 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Inpp5d | 16331 | 107357 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Tbxas1 | 21391 | 98497 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Stard8 | 236920 | 2448556 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Arhgap15 | 76117 | 1923367 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Tgfbr2 | 21813 | 98729 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | P2rx7 | 18439 | 1339957 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Colec12 | 140792 | 2152907 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Slc9a9 | 331004 | 2679732 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Ikzf1 | 22778 | 1342540 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Pnpla7 | 241274 | 2385325 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Ctsb | 13030 | 88561 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Apoe | 11816 | 88057 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Lrmda | 76633 | 1923883 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Snx2 | 67804 | 1915054 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Lyn | 17096 | 96892 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Rbpj | 19664 | 96522 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Maf | 17132 | 96909 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Dclre1c | 227525 | 2441769 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Rreb1 | 68750 | 2443664 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Sirpa | 19261 | 108563 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Lgmn | 19141 | 1330838 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Zfp710 | 209225 | 1921747 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Gas6 | 14456 | 95660 | ||||||
| 69 | 62 | Perivivascular Macrophage | all | Tnfaip8 | 106869 | 2147191 |