Marker Genes
Dataset: Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding
- tissue: Brain
- ontology: Brain
- genotype: C57BL/6 x DBA/2
- stage:
- treatment condition: WT
- cell/nucleus: Nuclei
- pmid: 29545511
- subset name: all
- total genes: Not reported
- clustering: Jaccard-Louvain
- pseudotime: t-SNE
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE110823
Rows:50
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69 | 54 | Unresolved Cluster54 | all | Ptprc | 19264 | 97810 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Kcng1 | 241794 | 3616086 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Gm12680 | 329876 | 3650846 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Nr4a3 | 18124 | 1352457 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Itgbl1 | 223272 | 2443439 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Iqcj | 208426 | 3644166 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Cpne6 | 12891 | 1334445 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Adamts2 | 216725 | 1347356 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Il1rapl2 | 60367 | 1913106 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Schip1 | 30953 | 1353557 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Cpne7 | 102278 | 2142747 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Ptpru | 19273 | 1321151 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Scml4 | 268297 | 2446140 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Pou6f2 | 218030 | 2443631 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Htr1f | 15557 | 99842 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Cnih3 | 72978 | 1920228 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Man1a | 17155 | 104677 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Prkcg | 18752 | 97597 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Piezo1 | 234839 | 3603204 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Rasal1 | 19415 | 1330842 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Samd5 | 320825 | 2444815 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Tafa1 | 320265 | 2443695 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Slc44a5 | 242259 | 3035141 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Adamtsl1 | 77739 | 1924989 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Cdh9 | 12565 | 107433 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Clmn | 94040 | 2136957 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Slit3 | 20564 | 1315202 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Spon1 | 233744 | 2385287 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Trpc7 | 26946 | 1349470 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Pde1a | 18573 | 1201792 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Lmo3 | 109593 | 102810 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Slc24a4 | 238384 | 2447362 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Faah | 14073 | 109609 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Trpc5 | 22067 | 109524 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Otof | 83762 | 1891247 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | 2900026A02Rik | 243219 | 1920194 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Sema3a | 20346 | 107558 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Dpy19l1 | 244745 | 1915685 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | St6galnac5 | 26938 | 1349471 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Ldb2 | 16826 | 894670 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Sobp | 109205 | 1924427 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Epha6 | 13840 | 108034 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Sec24d | 69608 | 1916858 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Plch2 | 269615 | 2443078 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Slc7a8 | 50934 | 1355323 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Arhgef28 | 110596 | 1346016 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Slco3a1 | 108116 | 1351867 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | B830012L14Rik | NULL | |||||||
| 69 | 54 | Unresolved Cluster54 | all | Camk2a | 12322 | 88256 | ||||||
| 69 | 54 | Unresolved Cluster54 | all | Slit1 | 20562 | 1315203 |