Marker Genes
Dataset: Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding
- tissue: Brain
- ontology: Brain
- genotype: C57BL/6 x DBA/2
- stage:
- treatment condition: WT
- cell/nucleus: Nuclei
- pmid: 29545511
- subset name: all
- total genes: Not reported
- clustering: Jaccard-Louvain
- pseudotime: t-SNE
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE110823
Rows:50
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69 | 53 | Unresolved Cluster53 | all | Rmst | 110333 | 1099806 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Snhg11 | 319317 | 2441845 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Meg3 | 17263 | 1202886 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Alk | 11682 | 103305 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | A230006K03Rik | 27493 | 3644205 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Cntnap5c | 620292 | 3646013 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Chrm2 | 243764 | 88397 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Sgcz | 244431 | 2388820 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Grik1 | 14805 | 95814 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Tcerg1l | 70571 | 1917821 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Cntnap5a | 636808 | 3643623 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Sorcs3 | 66673 | 1913923 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Agbl4 | 78933 | 1918244 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Col25a1 | 77018 | 1924268 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Nhs | 195727 | 2684894 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Rian | 75745 | 1922995 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Mirg | 100040724 | 3781106 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Lingo2 | 242384 | 2442298 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Adarb2 | 94191 | 2151118 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Cdh18 | 320865 | 1344366 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Slc12a5 | 57138 | 1862037 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Rasgrf1 | 19417 | 99694 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Spock3 | 72902 | 1920152 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Cntnap5b | 241175 | 3664583 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Nell1 | 338352 | 2443902 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Kcnip1 | 70357 | 1917607 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Unc5d | 210801 | 2389364 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | A330102I10Rik | 77920 | 1925170 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Grm8 | 14823 | 1351345 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Peg3 | 18616 | 104748 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Ptpn5 | 19259 | 97807 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Slit1 | 20562 | 1315203 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Snph | 241727 | 2139270 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Asic2 | 11418 | 1100867 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Atp1a3 | 232975 | 88107 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Gpi1 | 14751 | 95797 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Snrpn | 20646 | 98347 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Btbd11 | 74007 | 1921257 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Rit2 | 19762 | 108054 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Ahi1 | 52906 | 87971 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Ntng1 | 80883 | 1934028 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Scn1a | 20265 | 98246 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Thsd7b | 210417 | 2443925 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Lrrtm4 | 243499 | 2389180 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Vsnl1 | 26950 | 1349453 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Inpp4b | 234515 | 2158925 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Galntl6 | 270049 | 1913581 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Trank1 | 320429 | 1341834 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Palm2 | 242481 | 1934601 | ||||||
| 69 | 53 | Unresolved Cluster53 | all | Tshz2 | 228911 | 2153084 |