Marker Genes
Dataset: Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding
- tissue: Brain
- ontology: Brain
- genotype: C57BL/6 x DBA/2
- stage:
- treatment condition: WT
- cell/nucleus: Nuclei
- pmid: 29545511
- subset name: all
- total genes: Not reported
- clustering: Jaccard-Louvain
- pseudotime: t-SNE
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE110823
Rows:50
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69 | 52 | Cajal-Retzius | all | Trp73 | 22062 | 1336991 | ||||||
| 69 | 52 | Cajal-Retzius | all | Ndnf | 68169 | 1915419 | ||||||
| 69 | 52 | Cajal-Retzius | all | Emx2os | 329078 | 3052329 | ||||||
| 69 | 52 | Cajal-Retzius | all | Reln | 19699 | 103022 | ||||||
| 69 | 52 | Cajal-Retzius | all | Plekha7 | 233765 | 2445094 | ||||||
| 69 | 52 | Cajal-Retzius | all | Diablo | 66593 | 1913843 | ||||||
| 69 | 52 | Cajal-Retzius | all | Fmn1 | 14260 | 101815 | ||||||
| 69 | 52 | Cajal-Retzius | all | Thsd7b | 210417 | 2443925 | ||||||
| 69 | 52 | Cajal-Retzius | all | Cacna2d2 | 56808 | 1929813 | ||||||
| 69 | 52 | Cajal-Retzius | all | Kcnh7 | 170738 | 2159566 | ||||||
| 69 | 52 | Cajal-Retzius | all | 5330417C22Rik | 229722 | 1923930 | ||||||
| 69 | 52 | Cajal-Retzius | all | Tmem163 | 72160 | 1919410 | ||||||
| 69 | 52 | Cajal-Retzius | all | Slc22a15 | 242126 | 3607704 | ||||||
| 69 | 52 | Cajal-Retzius | all | Cobll1 | 319876 | 2442894 | ||||||
| 69 | 52 | Cajal-Retzius | all | Dach1 | 13134 | 1277991 | ||||||
| 69 | 52 | Cajal-Retzius | all | Clstn2 | 64085 | 1929897 | ||||||
| 69 | 52 | Cajal-Retzius | all | Angpt1 | 11600 | 108448 | ||||||
| 69 | 52 | Cajal-Retzius | all | Ripor2 | 193385 | 2444879 | ||||||
| 69 | 52 | Cajal-Retzius | all | Fat3 | 270120 | 2444314 | ||||||
| 69 | 52 | Cajal-Retzius | all | Cep112 | 76380 | 1923673 | ||||||
| 69 | 52 | Cajal-Retzius | all | Maml3 | 433586 | 2389461 | ||||||
| 69 | 52 | Cajal-Retzius | all | Nrg1 | 211323 | 96083 | ||||||
| 69 | 52 | Cajal-Retzius | all | Fndc3b | 72007 | 1919257 | ||||||
| 69 | 52 | Cajal-Retzius | all | Cdh4 | 12561 | 99218 | ||||||
| 69 | 52 | Cajal-Retzius | all | Dync1i1 | 13426 | 107743 | ||||||
| 69 | 52 | Cajal-Retzius | all | Utrn | 22288 | 104631 | ||||||
| 69 | 52 | Cajal-Retzius | all | Pou6f2 | 218030 | 2443631 | ||||||
| 69 | 52 | Cajal-Retzius | all | Msi2 | 76626 | 1923876 | ||||||
| 69 | 52 | Cajal-Retzius | all | B3galt1 | 26877 | 1349403 | ||||||
| 69 | 52 | Cajal-Retzius | all | Pdzd2 | 68070 | 1922394 | ||||||
| 69 | 52 | Cajal-Retzius | all | Ebf3 | 13593 | 894289 | ||||||
| 69 | 52 | Cajal-Retzius | all | Cntnap2 | 66797 | 1914047 | ||||||
| 69 | 52 | Cajal-Retzius | all | Cacna2d1 | 12293 | 88295 | ||||||
| 69 | 52 | Cajal-Retzius | all | Slc2a13 | 239606 | 2146030 | ||||||
| 69 | 52 | Cajal-Retzius | all | Aatf | 56321 | 1929608 | ||||||
| 69 | 52 | Cajal-Retzius | all | Gfra1 | 14585 | 1100842 | ||||||
| 69 | 52 | Cajal-Retzius | all | Rbms1 | 56878 | 1861774 | ||||||
| 69 | 52 | Cajal-Retzius | all | Dscaml1 | 114873 | 2150309 | ||||||
| 69 | 52 | Cajal-Retzius | all | Kcnc2 | 268345 | 96668 | ||||||
| 69 | 52 | Cajal-Retzius | all | Epha3 | 13837 | 99612 | ||||||
| 69 | 52 | Cajal-Retzius | all | Smad1 | 17125 | 109452 | ||||||
| 69 | 52 | Cajal-Retzius | all | Cdyl | 12593 | 1339956 | ||||||
| 69 | 52 | Cajal-Retzius | all | Gpc1 | 14733 | 1194891 | ||||||
| 69 | 52 | Cajal-Retzius | all | Kcnb2 | 98741 | 99632 | ||||||
| 69 | 52 | Cajal-Retzius | all | Ccdc148 | 227933 | 3039583 | ||||||
| 69 | 52 | Cajal-Retzius | all | Bbx | 70508 | 1917758 | ||||||
| 69 | 52 | Cajal-Retzius | all | Bin1 | 30948 | 108092 | ||||||
| 69 | 52 | Cajal-Retzius | all | Tmem200a | 77220 | 1924470 | ||||||
| 69 | 52 | Cajal-Retzius | all | Robo2 | 268902 | 1890110 | ||||||
| 69 | 52 | Cajal-Retzius | all | Frmd4b | 232288 | 2141794 |