Marker Genes
Dataset: Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding
- tissue: Brain
- ontology: Brain
- genotype: C57BL/6 x DBA/2
- stage:
- treatment condition: WT
- cell/nucleus: Nuclei
- pmid: 29545511
- subset name: all
- total genes: Not reported
- clustering: Jaccard-Louvain
- pseudotime: t-SNE
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE110823
Rows:50
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69 | 51 | Subventricular Zone Stem Cell | all | Dlx6os1 | 320038 | 2443217 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | 2610307P16Rik | 72518 | 1919768 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Tox3 | 244579 | 3039593 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Sox2ot | 320478 | 2444112 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Nol4 | 319211 | 2441684 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Dock1 | 330662 | 2429765 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Tiam2 | 24001 | 1344338 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Mpped2 | 77015 | 1924265 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Gab2 | 14389 | 1333854 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Nlk | 18099 | 1201387 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Nrxn3 | 18191 | 1096389 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Meis2 | 17536 | 108564 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Pou2f1 | 18986 | 101898 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Plcl1 | 227120 | 3036262 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Zbtb20 | 56490 | 1929213 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Frmd4b | 232288 | 2141794 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Zeb1 | 21417 | 1344313 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Msi2 | 76626 | 1923876 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Nipbl | 71175 | 1913976 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Mir9-3hg | 101694 | 2142071 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Gm4258 | 100043143 | 3782435 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Dclk2 | 70762 | 1918012 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Zfp704 | 170753 | 2180715 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Nfib | 18028 | 103188 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Igf1r | 16001 | 96433 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Wnk1 | 232341 | 2442092 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Nsd2 | 107823 | 1276574 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Asap1 | 13196 | 1342335 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Rbm39 | 170791 | 2157953 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Foxn3 | 71375 | 1918625 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Mir99ahg | 77994 | 1919929 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Chd7 | 320790 | 2444748 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Nfia | 18027 | 108056 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Elmo1 | 140580 | 2153044 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Ehmt1 | 77683 | 1924933 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Maml3 | 433586 | 2389461 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Zfp532 | 328977 | 3036282 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Ddx5 | 13207 | 105037 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Pan3 | 72587 | 1919837 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Zmiz1 | 328365 | 3040693 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Tcf12 | 21406 | 101877 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Trim2 | 80890 | 1933163 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Ptn | 19242 | 97804 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Setbp1 | 240427 | 1933199 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Cmss1 | 66497 | 1913747 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Kmt2c | 231051 | 2444959 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Phf21a | 192285 | 2384756 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Gm3764 | 100042277 | 3781938 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Chd6 | 71389 | 1918639 | ||||||
| 69 | 51 | Subventricular Zone Stem Cell | all | Tspan5 | 56224 | 1928096 |