Marker Genes
Dataset: Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding
- tissue: Brain
- ontology: Brain
- genotype: C57BL/6 x DBA/2
- stage:
- treatment condition: WT
- cell/nucleus: Nuclei
- pmid: 29545511
- subset name: all
- total genes: Not reported
- clustering: Jaccard-Louvain
- pseudotime: t-SNE
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE110823
Rows:50
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Lgr5 | 14160 | 1341817 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Pde5a | 242202 | 2651499 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Svep1 | 64817 | 1928849 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Pcbp3 | 59093 | 1890470 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Nxph1 | 18231 | 107492 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Etv1 | 14009 | 99254 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Pde1c | 18575 | 108413 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Thsd4 | 207596 | 2672033 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Gad1 | 14415 | 95632 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Dlx6os1 | 320038 | 2443217 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Gad2 | 14417 | 95634 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Spon1 | 233744 | 2385287 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Zeb2 | 24136 | 1344407 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Synpr | 72003 | 1919253 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Inpp4b | 234515 | 2158925 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Nhs | 195727 | 2684894 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Pdzrn4 | 239618 | 3056996 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Kcnd3 | 56543 | 1928743 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Meis2 | 17536 | 108564 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Kirrel3 | 67703 | 1914953 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Fstl4 | 320027 | 2443199 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Gria1 | 14799 | 95808 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Sdk2 | 237979 | 2443847 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Slco3a1 | 108116 | 1351867 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Sox2ot | 320478 | 2444112 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Pik3r1 | 18708 | 97583 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Nectin3 | 58998 | 1930171 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Fgf12 | 14167 | 109183 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Ppm1e | 320472 | 2444096 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Dcx | 13193 | 1277171 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Cyth1 | 19157 | 1334257 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Nol4 | 319211 | 2441684 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Zfp608 | 269023 | 2442338 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Cdh12 | 215654 | 109503 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Dscaml1 | 114873 | 2150309 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Ptprm | 19274 | 102694 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Ptpro | 19277 | 1097152 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Hdac4 | 208727 | 3036234 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Sorcs2 | 81840 | 1932289 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Sox5 | 20678 | 98367 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Maml3 | 433586 | 2389461 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Cacnb2 | 12296 | 894644 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Brinp1 | 56710 | 1928478 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Klf12 | 16597 | 1333796 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Rbms1 | 56878 | 1861774 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Cdk14 | 18647 | 894318 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Shisa9 | 72555 | 1919805 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Nrxn3 | 18191 | 1096389 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Map3k1 | 26401 | 1346872 | ||||||
| 69 | 49 | Migrating Interneuron - Lgr6 | all | Epb41l3 | 13823 | 103008 |