Marker Genes
Dataset: Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding
- tissue: Brain
- ontology: Brain
- genotype: C57BL/6 x DBA/2
- stage:
- treatment condition: WT
- cell/nucleus: Nuclei
- pmid: 29545511
- subset name: all
- total genes: Not reported
- clustering: Jaccard-Louvain
- pseudotime: t-SNE
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE110823
Rows:50
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Frmd7 | 385354 | 2686379 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Cpa6 | 329093 | 3045348 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Lgr5 | 14160 | 1341817 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Cpne4 | 74020 | 1921270 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Tshz1 | 110796 | 1346031 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Pcbp3 | 59093 | 1890470 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Gng4 | 14706 | 102703 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Runx2 | 12393 | 99829 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Pbx3 | 18516 | 97496 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Gad1 | 14415 | 95632 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Dlx6os1 | 320038 | 2443217 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Syt6 | 54524 | 1859544 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Meis2 | 17536 | 108564 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Ppm1e | 320472 | 2444096 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Ankrd6 | 140577 | 2154278 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Dync1i1 | 13426 | 107743 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Ano4 | 320091 | 2443344 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | 4930448N21Rik | 384817 | 1926155 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Adarb2 | 94191 | 2151118 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Il1rapl2 | 60367 | 1913106 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Fam171b | 241520 | 2444579 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Grm8 | 14823 | 1351345 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Sox2ot | 320478 | 2444112 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Sybu | 319613 | 2442392 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Stxbp6 | 217517 | 2384963 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Fgf12 | 14167 | 109183 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Synpr | 72003 | 1919253 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Il1rapl1 | 331461 | 2687319 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Zfp385b | 241494 | 2444734 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Hdac4 | 208727 | 3036234 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Ptpro | 19277 | 1097152 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Slc35f4 | 75288 | 1922538 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Ppp1r12b | 329251 | 1916417 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Nrxn3 | 18191 | 1096389 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Kcnh5 | 238271 | 3584508 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Pbx1 | 18514 | 97495 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Lrba | 80877 | 1933162 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Sipa1l1 | 217692 | 2443679 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Auts2 | 319974 | 1919847 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Kcnj3 | 16519 | 104742 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Zmat4 | 320158 | 2443497 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Epb41l3 | 13823 | 103008 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Gnai1 | 14677 | 95771 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Cacna1c | 12288 | 103013 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Igsf11 | 207683 | 2388477 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Myo16 | 244281 | 2685951 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Rap1gds1 | 229877 | 2385189 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Ptprm | 19274 | 102694 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Oxr1 | 170719 | 2179326 | ||||||
| 69 | 46 | Migrating Interneuron - Cpa6 | all | Kcnb2 | 98741 | 99632 |