Marker Genes
Dataset: Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding
- tissue: Brain
- ontology: Brain
- genotype: C57BL/6 x DBA/2
- stage:
- treatment condition: WT
- cell/nucleus: Nuclei
- pmid: 29545511
- subset name: all
- total genes: Not reported
- clustering: Jaccard-Louvain
- pseudotime: t-SNE
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE110823
Rows:50
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Mkx | 210719 | 2687286 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Nxph1 | 18231 | 107492 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Kcnc2 | 268345 | 96668 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Cntnap3 | 238680 | 3588199 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Maf | 17132 | 96909 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Col19a1 | 12823 | 1095415 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Erbb4 | 13869 | 104771 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Kcnmb2 | 72413 | 1919663 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Dlgap2 | 244310 | 2443181 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Sh3rf3 | 237353 | 2444637 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Dgkg | 110197 | 105060 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Etl4 | 208618 | 95454 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Cdh9 | 12565 | 107433 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Gria1 | 14799 | 95808 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Galntl6 | 270049 | 1913581 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Adamts17 | 233332 | 3588195 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Grik1 | 14805 | 95814 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Satb1 | 20230 | 105084 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Neto1 | 246317 | 2180216 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Gad2 | 14417 | 95634 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Tmem132c | 208213 | 2443061 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Sox6 | 20679 | 98368 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Mef2c | 17260 | 99458 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Ptchd4 | 627626 | 1920485 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Slc6a1 | 232333 | 95627 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Grip1 | 74053 | 1921303 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Mpped1 | 223726 | 106316 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Gabrg3 | 14407 | 95624 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Tshz3 | 243931 | 2442819 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Thsd7a | 330267 | 2685683 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Thrb | 21834 | 98743 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Elavl2 | 15569 | 1100887 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Tmem132b | 208151 | 3609245 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Ptprm | 19274 | 102694 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Rps6ka5 | 73086 | 1920336 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Nrxn3 | 18191 | 1096389 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Kcnip1 | 70357 | 1917607 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Grin3a | 242443 | 1933206 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Ubash3b | 72828 | 1920078 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Zfp536 | 243937 | 1926102 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Tmem178 | 68027 | 1915277 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Gad1 | 14415 | 95632 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Afap1 | 70292 | 1917542 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Arnt2 | 11864 | 107188 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Xkr4 | 497097 | 3528744 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Zeb2 | 24136 | 1344407 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Cux2 | 13048 | 107321 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Slc44a5 | 242259 | 3035141 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Dlgap1 | 224997 | 1346065 | ||||||
| 69 | 44 | Migrating Interneuron - Lhx6 | all | Pam | 18484 | 97475 |