Marker Genes
Dataset: Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding
- tissue: Brain
- ontology: Brain
- genotype: C57BL/6 x DBA/2
- stage:
- treatment condition: WT
- cell/nucleus: Nuclei
- pmid: 29545511
- subset name: all
- total genes: Not reported
- clustering: Jaccard-Louvain
- pseudotime: t-SNE
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE110823
Rows:50
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Pde11a | 241489 | 3036251 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Hmga2 | 15364 | 101761 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Tll2 | 24087 | 1346044 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Lmx1b | 16917 | 1100513 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Ebf2 | 13592 | 894332 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Arhgap6 | 11856 | 1196332 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Mctp2 | 244049 | 2685335 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | 9530026P05Rik | 330385 | 1924659 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Prex2 | 109294 | 1923385 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Cpne8 | 66871 | 1914121 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Ebf1 | 13591 | 95275 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Ebf3 | 13593 | 894289 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Syt10 | 54526 | 1859546 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Cntnap5c | 620292 | 3646013 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Ankfn1 | 382543 | 2686021 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Ajap1 | 230959 | 2685419 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Vat1l | 270097 | 2142534 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Adamts16 | 271127 | 2429637 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Tmcc3 | 319880 | 2442900 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Col11a1 | 12814 | 88446 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Tspan18 | 241556 | 1917186 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Rmst | 110333 | 1099806 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Gfra1 | 14585 | 1100842 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Mtus2 | 77521 | 1915388 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Cfap69 | 207686 | 2443778 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Sgcz | 244431 | 2388820 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Nhs | 195727 | 2684894 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Fbn2 | 14119 | 95490 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Ak5 | 229949 | 2677491 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Cfap54 | 380654 | 1922208 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Grin3a | 242443 | 1933206 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Fat4 | 329628 | 3045256 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Gm15155 | 102639025 | 3642241 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Spock3 | 72902 | 1920152 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Kcnt1 | 227632 | 1924627 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Nwd2 | 319807 | 1920464 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Kcnh5 | 238271 | 3584508 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Iqsec3 | 243621 | 2677208 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Pld5 | 319455 | 2442056 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Susd4 | 96935 | 2138351 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Syt16 | 238266 | 2673872 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Sptb | 20741 | 98387 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Fam135b | 70363 | 1917613 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Ldb2 | 16826 | 894670 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Rasgrf1 | 19417 | 99694 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Bcl2 | 12043 | 88138 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Galnt13 | 271786 | 2139447 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Ghr | 14600 | 95708 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Pde3a | 54611 | 1860764 | ||||||
| 69 | 42 | Spinal Cord Glutamatergic - Hmga2 | all | Prkg1 | 19091 | 108174 |