Marker Genes
Dataset: Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding
- tissue: Brain
- ontology: Brain
- genotype: C57BL/6 x DBA/2
- stage:
- treatment condition: WT
- cell/nucleus: Nuclei
- pmid: 29545511
- subset name: all
- total genes: Not reported
- clustering: Jaccard-Louvain
- pseudotime: t-SNE
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE110823
Rows:50
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Myo5b | 17919 | 106598 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Prox1 | 19130 | 97772 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Tspan18 | 241556 | 1917186 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | 2010300C02Rik | 72097 | 1919347 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Nr3c2 | 110784 | 99459 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Slit3 | 20564 | 1315202 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Nrp2 | 18187 | 1100492 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Camk2a | 12322 | 88256 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Zbtb20 | 56490 | 1929213 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Ak5 | 229949 | 2677491 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Ptk2b | 19229 | 104908 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Cdh9 | 12565 | 107433 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Nrp1 | 18186 | 106206 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Rfx3 | 19726 | 106582 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Itga8 | 241226 | 109442 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Dgkg | 110197 | 105060 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Dnah9 | 237806 | 1289279 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Sema5a | 20356 | 107556 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Pip5k1b | 18719 | 107930 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Mctp1 | 78771 | 1926021 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Iqgap2 | 544963 | 2449975 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Epha4 | 13838 | 98277 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Fat4 | 329628 | 3045256 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Jph1 | 57339 | 1891495 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Adamts17 | 233332 | 3588195 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Galnt17 | 212996 | 2137594 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Dab1 | 13131 | 108554 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | St6galnac5 | 26938 | 1349471 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Il1rap | 16180 | 104975 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Clstn2 | 64085 | 1929897 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Grb14 | 50915 | 1355324 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Sorcs2 | 81840 | 1932289 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Synpr | 72003 | 1919253 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Sphkap | 77629 | 1924879 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Iqcj | 208426 | 3644166 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Gria1 | 14799 | 95808 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Slc16a2 | 20502 | 1203732 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Ptpre | 19267 | 97813 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Arsb | 11881 | 88075 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Cntnap5b | 241175 | 3664583 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Slc7a14 | 241919 | 3040688 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Tmem108 | 81907 | 1932411 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Zfpm2 | 22762 | 1334444 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Lmo7 | 380928 | 1353586 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Mlip | 69642 | 1916892 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Lgi1 | 56839 | 1861691 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Camk2b | 12323 | 88257 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Shisa6 | 380702 | 2685725 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Cntnap5a | 636808 | 3643623 | ||||||
| 69 | 40 | Hippocampal Granule/Pyramidal CA3 | all | Gabra5 | 110886 | 95617 |