Marker Genes
Dataset: Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding
- tissue: Brain
- ontology: Brain
- genotype: C57BL/6 x DBA/2
- stage:
- treatment condition: WT
- cell/nucleus: Nuclei
- pmid: 29545511
- subset name: all
- total genes: Not reported
- clustering: Jaccard-Louvain
- pseudotime: t-SNE
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE110823
Rows:48
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69 | 4 | Striatal Medium Spiny Neurons | all | Rxrg | 20183 | 98216 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Myo3b | 329421 | 2448580 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Rarb | 218772 | 97857 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Gng7 | 14708 | 95787 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Bcl11b | 58208 | 1929913 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Pde7b | 29863 | 1352752 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Pde10a | 23984 | 1345143 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Actn2 | 11472 | 109192 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Gucy1a1 | 60596 | 1926562 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Gnal | 14680 | 95774 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Foxp1 | 108655 | 1914004 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Rgs9 | 19739 | 1338824 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Ngef | 53972 | 1858414 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Cacna2d3 | 12294 | 1338890 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Pde2a | 207728 | 2446107 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Pou6f2 | 218030 | 2443631 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Foxo1 | 56458 | 1890077 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Adcy5 | 224129 | 99673 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Dach1 | 13134 | 1277991 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Kcnab1 | 16497 | 109155 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Meis2 | 17536 | 108564 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Syt6 | 54524 | 1859544 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Caln1 | 140904 | 2155987 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | 6530403H02Rik | 320739 | 2444638 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Elmod1 | 270162 | 3583900 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Ano3 | 228432 | 3613666 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Col25a1 | 77018 | 1924268 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Foxp2 | 114142 | 2148705 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Phactr1 | 218194 | 2659021 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Man1a | 17155 | 104677 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Zfhx3 | 11906 | 99948 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Slc35f3 | 210027 | 2444426 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Ryr3 | 20192 | 99684 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Cdh8 | 12564 | 107434 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Lmo3 | 109593 | 102810 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Htr2c | 15560 | 96281 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Adamts3 | 330119 | 3045353 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Gabrg3 | 14407 | 95624 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Ntn1 | 18208 | 105088 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Gad2 | 14417 | 95634 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Trank1 | 320429 | 1341834 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Mrtfb | 239719 | 3050795 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Grm5 | 108071 | 1351342 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | A930011G23Rik | 319818 | 2442790 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Fras1 | 231470 | 2385368 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Diaph2 | 54004 | 1858500 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Galnt13 | 271786 | 2139447 | ||||||
| 69 | 4 | Striatal Medium Spiny Neurons | all | Ripor2 | 193385 | 2444879 |