Marker Genes
Dataset: Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding
- tissue: Brain
- ontology: Brain
- genotype: C57BL/6 x DBA/2
- stage:
- treatment condition: WT
- cell/nucleus: Nuclei
- pmid: 29545511
- subset name: all
- total genes: Not reported
- clustering: Jaccard-Louvain
- pseudotime: t-SNE
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE110823
Rows:50
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Sema3c | 20348 | 107557 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Prox1 | 19130 | 97772 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Tspan18 | 241556 | 1917186 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Rerg | 232441 | 2665139 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Sema5a | 20356 | 107556 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Zbtb20 | 56490 | 1929213 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Nrp2 | 18187 | 1100492 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Fgfr1 | 14182 | 95522 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Nrp1 | 18186 | 106206 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Epha4 | 13838 | 98277 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Adamts18 | 208936 | 2442600 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Mctp1 | 78771 | 1926021 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Slit3 | 20564 | 1315202 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Ptpro | 19277 | 1097152 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Clstn2 | 64085 | 1929897 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Plxna2 | 18845 | 107684 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Pik3r1 | 18708 | 97583 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Fbxl7 | 448987 | 3052506 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Zfpm2 | 22762 | 1334444 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Frmd4b | 232288 | 2141794 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Dcc | 13176 | 94869 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Grik4 | 110637 | 95817 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Fat4 | 329628 | 3045256 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Slc39a11 | 69806 | 1917056 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Dab1 | 13131 | 108554 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Cntnap5a | 636808 | 3643623 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Nfix | 18032 | 97311 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Cntnap5b | 241175 | 3664583 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Cblb | 208650 | 2146430 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Ttc28 | 209683 | 2140873 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Sh3kbp1 | 58194 | 1889583 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Plxna4 | 243743 | 2179061 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Tcf4 | 21413 | 98506 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Hecw1 | 94253 | 2444115 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Epha7 | 13841 | 95276 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Nfib | 18028 | 103188 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Thsd7a | 330267 | 2685683 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Slc44a1 | 100434 | 2140592 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Gramd1b | 235283 | 1925037 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Rfx3 | 19726 | 106582 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Sorcs2 | 81840 | 1932289 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Nell1 | 338352 | 2443902 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Msra | 110265 | 106916 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Rbfox1 | 268859 | 1926224 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Ablim3 | 319713 | 2442582 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Ntrk3 | 18213 | 97385 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Nr3c2 | 110784 | 99459 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Gm20696 | NULL | |||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Synpr | 72003 | 1919253 | ||||||
| 69 | 39 | Hippocampal Granule Precursor - Nrp2 | all | Zeb2 | 24136 | 1344407 |