Marker Genes

Dataset: Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding

  • tissue: Brain
  • ontology: Brain
  • genotype: C57BL/6 x DBA/2
  • stage:
  • treatment condition: WT

Rows:50
dataset id cluster id cluster name cell type name sample id gene symbol entrez geneid species specific geneid
avg log fc (?)
pct 1 pct 2 p value padj
69 37 Hippocampal Pyramidal Precursor all Sema3c 20348 107557
69 37 Hippocampal Pyramidal Precursor all Nrp1 18186 106206
69 37 Hippocampal Pyramidal Precursor all Rerg 232441 2665139
69 37 Hippocampal Pyramidal Precursor all Tspan18 241556 1917186
69 37 Hippocampal Pyramidal Precursor all Sema3e 20349 1340034
69 37 Hippocampal Pyramidal Precursor all Slit3 20564 1315202
69 37 Hippocampal Pyramidal Precursor all Slc16a2 20502 1203732
69 37 Hippocampal Pyramidal Precursor all Msra 110265 106916
69 37 Hippocampal Pyramidal Precursor all Zbtb20 56490 1929213
69 37 Hippocampal Pyramidal Precursor all Fgfr1 14182 95522
69 37 Hippocampal Pyramidal Precursor all Chrna7 11441 99779
69 37 Hippocampal Pyramidal Precursor all 6530403H02Rik 320739 2444638
69 37 Hippocampal Pyramidal Precursor all Pcsk5 18552 97515
69 37 Hippocampal Pyramidal Precursor all Galnt17 212996 2137594
69 37 Hippocampal Pyramidal Precursor all Cntn2 21367 104518
69 37 Hippocampal Pyramidal Precursor all Tiam2 24001 1344338
69 37 Hippocampal Pyramidal Precursor all Gabra2 14395 95614
69 37 Hippocampal Pyramidal Precursor all Lmo7 380928 1353586
69 37 Hippocampal Pyramidal Precursor all Nrp2 18187 1100492
69 37 Hippocampal Pyramidal Precursor all Slc35f3 210027 2444426
69 37 Hippocampal Pyramidal Precursor all Shisa6 380702 2685725
69 37 Hippocampal Pyramidal Precursor all Opcml 330908 97397
69 37 Hippocampal Pyramidal Precursor all Clstn2 64085 1929897
69 37 Hippocampal Pyramidal Precursor all Runx1t1 12395 104793
69 37 Hippocampal Pyramidal Precursor all Mdga1 74762 1922012
69 37 Hippocampal Pyramidal Precursor all Grik4 110637 95817
69 37 Hippocampal Pyramidal Precursor all Pde1a 18573 1201792
69 37 Hippocampal Pyramidal Precursor all Mctp1 78771 1926021
69 37 Hippocampal Pyramidal Precursor all Grin2a 14811 95820
69 37 Hippocampal Pyramidal Precursor all Epha5 13839 99654
69 37 Hippocampal Pyramidal Precursor all Epha4 13838 98277
69 37 Hippocampal Pyramidal Precursor all Zeb2 24136 1344407
69 37 Hippocampal Pyramidal Precursor all Fam189a1 70638 1917888
69 37 Hippocampal Pyramidal Precursor all Dcc 13176 94869
69 37 Hippocampal Pyramidal Precursor all Zfp385b 241494 2444734
69 37 Hippocampal Pyramidal Precursor all Nckap5 210356 2686394
69 37 Hippocampal Pyramidal Precursor all Bcl11a 14025 106190
69 37 Hippocampal Pyramidal Precursor all Frmd4b 232288 2141794
69 37 Hippocampal Pyramidal Precursor all Zswim6 67263 1914513
69 37 Hippocampal Pyramidal Precursor all Shtn1 71653 1918903
69 37 Hippocampal Pyramidal Precursor all Gm26871 102634933 5477365
69 37 Hippocampal Pyramidal Precursor all Cyfip1 20430 1338801
69 37 Hippocampal Pyramidal Precursor all 5730522E02Rik 70626 1917876
69 37 Hippocampal Pyramidal Precursor all Plxna2 18845 107684
69 37 Hippocampal Pyramidal Precursor all Prkd1 18760 99879
69 37 Hippocampal Pyramidal Precursor all Rbfox1 268859 1926224
69 37 Hippocampal Pyramidal Precursor all Hcn1 15165 1096392
69 37 Hippocampal Pyramidal Precursor all Tcf4 21413 98506
69 37 Hippocampal Pyramidal Precursor all Epha6 13840 108034
69 37 Hippocampal Pyramidal Precursor all Snca 20617 1277151