Marker Genes
Dataset: Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding
- tissue: Brain
- ontology: Brain
- genotype: C57BL/6 x DBA/2
- stage:
- treatment condition: WT
- cell/nucleus: Nuclei
- pmid: 29545511
- subset name: all
- total genes: Not reported
- clustering: Jaccard-Louvain
- pseudotime: t-SNE
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE110823
Rows:50
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Crym | 12971 | 102675 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Nr4a3 | 18124 | 1352457 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | RP23-230F2.8 | NULL | |||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Slit3 | 20564 | 1315202 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Epha6 | 13840 | 108034 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Sema3e | 20349 | 1340034 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | St6galnac5 | 26938 | 1349471 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Shisa6 | 380702 | 2685725 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Dnah9 | 237806 | 1289279 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Nrp1 | 18186 | 106206 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Pex5l | 58869 | 1916672 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Dgkg | 110197 | 105060 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Msra | 110265 | 106916 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Grin2a | 14811 | 95820 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Pde1a | 18573 | 1201792 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Itga8 | 241226 | 109442 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Trpc4 | 22066 | 109525 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Chst8 | 68947 | 1916197 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Fam189a1 | 70638 | 1917888 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Iqgap2 | 544963 | 2449975 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Prkcg | 18752 | 97597 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Nr3c2 | 110784 | 99459 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Camk2a | 12322 | 88256 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Iqcj | 208426 | 3644166 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Atp2b1 | 67972 | 104653 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Slc16a2 | 20502 | 1203732 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Raver2 | 242570 | 2443623 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Hcn1 | 15165 | 1096392 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Lmo7 | 380928 | 1353586 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Chrna7 | 11441 | 99779 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Mlip | 69642 | 1916892 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Hunk | 26559 | 1347352 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Cttnbp2 | 30785 | 1353467 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Mical2 | 320878 | 2444947 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Ndst4 | 64580 | 1932545 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Galnt17 | 212996 | 2137594 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Trpc5 | 22067 | 109524 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Zbtb16 | 235320 | 103222 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Epha5 | 13839 | 99654 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | 3110039M20Rik | 67293 | 1914543 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Gabra2 | 14395 | 95614 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Actr3b | 242894 | 2661120 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Galntl6 | 270049 | 1913581 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Opcml | 330908 | 97397 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Galnt18 | 233733 | 2446239 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Schip1 | 30953 | 1353557 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Epha7 | 13841 | 95276 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Egfem1 | 75740 | 1922990 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Ryr3 | 20192 | 99684 | ||||||
| 69 | 35 | Hippocampal Pyramidal - Crym | all | Dtnbp1 | 94245 | 2137586 |