Marker Genes
Dataset: Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding
- tissue: Brain
- ontology: Brain
- genotype: C57BL/6 x DBA/2
- stage:
- treatment condition: WT
- cell/nucleus: Nuclei
- pmid: 29545511
- subset name: all
- total genes: Not reported
- clustering: Jaccard-Louvain
- pseudotime: t-SNE
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE110823
Rows:50
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69 | 34 | Subiculum Pyramidal | all | Fn1 | 14268 | 95566 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Rxfp1 | 381489 | 2682211 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Fosl2 | 14284 | 102858 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Nr4a2 | 18227 | 1352456 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Mctp2 | 244049 | 2685335 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Lix1 | 66643 | 1913893 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Rspo2 | 239405 | 1922667 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Gfra1 | 14585 | 1100842 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Robo3 | 19649 | 1343102 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | RP23-230F2.8 | NULL | |||||||
| 69 | 34 | Subiculum Pyramidal | all | Iqcj | 208426 | 3644166 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Crym | 12971 | 102675 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Bcl6 | 12053 | 107187 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | 2310002F09Rik | 100504720 | 1916779 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Npr3 | 18162 | 97373 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Chst8 | 68947 | 1916197 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Lmo7 | 380928 | 1353586 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Tenm3 | 23965 | 1345183 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Schip1 | 30953 | 1353557 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Cntnap5a | 636808 | 3643623 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Nrp1 | 18186 | 106206 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Samd5 | 320825 | 2444815 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Bcl11b | 58208 | 1929913 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Ndst4 | 64580 | 1932545 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Mylip | 218203 | 2388271 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Hlf | 217082 | 96108 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | St6galnac5 | 26938 | 1349471 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Syt4 | 20983 | 101759 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Rasgrp1 | 19419 | 1314635 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Trmt9b | 319582 | 2442328 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Adgra1 | 52389 | 1277167 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Gm13986 | 329496 | 3651937 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Epha5 | 13839 | 99654 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Tenm2 | 23964 | 1345184 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Pex5l | 58869 | 1916672 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Actr3b | 242894 | 2661120 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Brinp3 | 215378 | 2443035 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Shisa6 | 380702 | 2685725 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Hcn1 | 15165 | 1096392 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Cdh6 | 12563 | 107435 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Mlip | 69642 | 1916892 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Msra | 110265 | 106916 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Nos1ap | 70729 | 1917979 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Trpc5 | 22067 | 109524 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Grb14 | 50915 | 1355324 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Pcsk5 | 18552 | 97515 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Ldb2 | 16826 | 894670 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | St8sia2 | 20450 | 106020 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Znrf2 | 387524 | 1196246 | ||||||
| 69 | 34 | Subiculum Pyramidal | all | Lmo3 | 109593 | 102810 |