Marker Genes
Dataset: Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding
- tissue: Brain
- ontology: Brain
- genotype: C57BL/6 x DBA/2
- stage:
- treatment condition: WT
- cell/nucleus: Nuclei
- pmid: 29545511
- subset name: all
- total genes: Not reported
- clustering: Jaccard-Louvain
- pseudotime: t-SNE
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE110823
Rows:50
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69 | 32 | Nigral Dopaminergic | all | Slc6a3 | 13162 | 94862 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Chrnb3 | 108043 | 106212 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Ddc | 13195 | 94876 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Gucy2c | 14917 | 106903 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Slc18a2 | 214084 | 106677 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Th | 21823 | 98735 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Ttc6 | 70846 | 2684915 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Lmx1a | 110648 | 1888519 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Klhl1 | 93688 | 2136335 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Oprk1 | 18387 | 97439 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Iqcj | 208426 | 3644166 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Lmx1b | 16917 | 1100513 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Pappa | 18491 | 97479 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Schip1 | 30953 | 1353557 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Trpc6 | 22068 | 109523 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Spag16 | 66722 | 1913972 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Tmem255a | 245386 | 3045722 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Syt17 | 110058 | 104966 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Bnc2 | 242509 | 2443805 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Drd2 | 13489 | 94924 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Ptpru | 19273 | 1321151 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Ccdc171 | 320226 | 1922152 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Lix1 | 66643 | 1913893 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Col25a1 | 77018 | 1924268 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Cpne7 | 102278 | 2142747 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Tll1 | 21892 | 106923 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Sv2c | 75209 | 1922459 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Prima1 | 170952 | 1926097 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Lrrc3b | 218763 | 2384996 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Gfra1 | 14585 | 1100842 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | 4930447C04Rik | 75801 | 1923051 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Vwc2l | 320460 | 2444069 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Tmem196 | 217951 | 2685374 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Galntl6 | 270049 | 1913581 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Il1rapl2 | 60367 | 1913106 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Tox2 | 269389 | 3611233 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Nos1ap | 70729 | 1917979 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Kcnn3 | 140493 | 2153183 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Ammecr1 | 56068 | 1860206 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Epha10 | 230735 | 3586824 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Insyn2b | 574403 | 3643491 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Col11a1 | 12814 | 88446 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Nwd2 | 319807 | 1920464 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Ntn1 | 18208 | 105088 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Zfhx3 | 11906 | 99948 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Olfm3 | 229759 | 2387329 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Adarb2 | 94191 | 2151118 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Spats2l | 67198 | 1914448 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Cntnap4 | 170571 | 2183572 | ||||||
| 69 | 32 | Nigral Dopaminergic | all | Prr16 | 71373 | 1918623 |