Marker Genes
Dataset: Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding
- tissue: Brain
- ontology: Brain
- genotype: C57BL/6 x DBA/2
- stage:
- treatment condition: WT
- cell/nucleus: Nuclei
- pmid: 29545511
- subset name: all
- total genes: Not reported
- clustering: Jaccard-Louvain
- pseudotime: t-SNE
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE110823
Rows:50
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69 | 21 | Thalamic Interneuron | all | Fign | 60344 | 1890647 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Fam163a | 329274 | 3618859 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Sema3e | 20349 | 1340034 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Zbtb7c | 207259 | 2443302 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Gm15155 | 102639025 | 3642241 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Hs3st4 | 628779 | 1333792 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Rnf144b | 218215 | 2384986 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Ptchd1 | 211612 | 2685233 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Slc44a5 | 242259 | 3035141 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Esrrg | 26381 | 1347056 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Kcnmb2 | 72413 | 1919663 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Ubash3b | 72828 | 1920078 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Prlr | 19116 | 97763 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Plch1 | 269437 | 2683547 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Vwc2 | 319922 | 2442987 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Zdhhc2 | 70546 | 1923452 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Unc13c | 208898 | 2149021 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Lrrc4c | 241568 | 2442636 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Ak5 | 229949 | 2677491 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Gad2 | 14417 | 95634 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Cacna1i | 239556 | 2178051 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Gfra1 | 14585 | 1100842 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Tmem132b | 208151 | 3609245 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Zfp804a | 241514 | 2442949 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Rnf220 | 66743 | 1913993 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Grm3 | 108069 | 1351340 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Btbd11 | 74007 | 1921257 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Gabra3 | 14396 | 95615 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Slc35f1 | 215085 | 2139810 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Gfra2 | 14586 | 1195462 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Kctd16 | 383348 | 1914659 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Bmper | 73230 | 1920480 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Pdzd2 | 68070 | 1922394 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Cacna2d2 | 56808 | 1929813 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Col25a1 | 77018 | 1924268 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Gad1 | 14415 | 95632 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Il1rapl2 | 60367 | 1913106 | ||||||
| 69 | 21 | Thalamic Interneuron | all | St8sia4 | 20452 | 106018 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Scn3a | 20269 | 98249 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Galntl6 | 270049 | 1913581 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Myo16 | 244281 | 2685951 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Asic2 | 11418 | 1100867 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Insyn2b | 574403 | 3643491 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Kcnma1 | 16531 | 99923 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Adcy1 | 432530 | 99677 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Ldlrad3 | 241576 | 2138856 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Shank2 | 210274 | 2671987 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Tmem132c | 208213 | 2443061 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Elavl4 | 15572 | 107427 | ||||||
| 69 | 21 | Thalamic Interneuron | all | Rgs6 | 50779 | 1354730 |