Marker Genes
Dataset: Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding
- tissue: Brain
- ontology: Brain
- genotype: C57BL/6 x DBA/2
- stage:
- treatment condition: WT
- cell/nucleus: Nuclei
- pmid: 29545511
- subset name: all
- total genes: Not reported
- clustering: Jaccard-Louvain
- pseudotime: t-SNE
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE110823
Rows:50
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69 | 20 | Thalamic Gluatamatergic | all | Rnf220 | 66743 | 1913993 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Synpo2 | 118449 | 2153070 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Lef1 | 16842 | 96770 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Prkch | 18755 | 97600 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Ntng1 | 80883 | 1934028 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Kitl | 17311 | 96974 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Cpne7 | 102278 | 2142747 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Tcf7l2 | 21416 | 1202879 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Samd5 | 320825 | 2444815 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Ptpn3 | 545622 | 105307 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Mast4 | 328329 | 1918885 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Fign | 60344 | 1890647 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Prox1 | 19130 | 97772 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Phactr2 | 215789 | 2446138 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Vav3 | 57257 | 1888518 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Zmat4 | 320158 | 2443497 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Slc17a6 | 140919 | 2156052 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Glis1 | 230587 | 2386723 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Nell1 | 338352 | 2443902 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Zfp423 | 94187 | 1891217 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Col26a1 | 140709 | 2155345 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Shisa9 | 72555 | 1919805 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Sorcs2 | 81840 | 1932289 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Inpp4b | 234515 | 2158925 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Tmem163 | 72160 | 1919410 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Zfhx3 | 11906 | 99948 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Trpc3 | 22065 | 109526 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Pcsk5 | 18552 | 97515 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Tmem132c | 208213 | 2443061 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Shisal1 | 72301 | 1919551 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Grb14 | 50915 | 1355324 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Arhgap24 | 231532 | 1922647 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Rtn4rl1 | 237847 | 2661375 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Foxp2 | 114142 | 2148705 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Tmem150c | 231503 | 3041258 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Tcerg1l | 70571 | 1917821 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Epb41l4b | 54357 | 1859149 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Glra2 | 237213 | 95748 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Kcnh8 | 211468 | 2445160 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Mgat4c | 67569 | 1914819 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Plekha7 | 233765 | 2445094 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Scn9a | 20274 | 107636 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Adamts17 | 233332 | 3588195 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Cntn5 | 244682 | 3042287 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Srgap1 | 117600 | 2152936 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Galnt14 | 71685 | 1918935 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Cntn6 | 53870 | 1858223 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Crtac1 | 72832 | 1920082 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Cacna1g | 12291 | 1201678 | ||||||
| 69 | 20 | Thalamic Gluatamatergic | all | Patj | 12695 | 1277960 |