Marker Genes
Dataset: Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding
- tissue: Brain
- ontology: Brain
- genotype: C57BL/6 x DBA/2
- stage:
- treatment condition: WT
- cell/nucleus: Nuclei
- pmid: 29545511
- subset name: all
- total genes: Not reported
- clustering: Jaccard-Louvain
- pseudotime: t-SNE
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE110823
Rows:50
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Tfap2d | 226896 | 2153466 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Ndst4 | 64580 | 1932545 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Lhx9 | 16876 | 1316721 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Zfhx3 | 11906 | 99948 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Zfhx4 | 80892 | 2137668 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Tcf7l2 | 21416 | 1202879 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Foxp2 | 114142 | 2148705 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Zbtb7c | 207259 | 2443302 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Cntn5 | 244682 | 3042287 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Cntnap5c | 620292 | 3646013 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Ntng1 | 80883 | 1934028 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Sgcz | 244431 | 2388820 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Cntn4 | 269784 | 1095737 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Slc17a6 | 140919 | 2156052 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Cdh18 | 320865 | 1344366 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Unc5d | 210801 | 2389364 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Cdh7 | 241201 | 2442792 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Plxna1 | 18844 | 107685 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Chrm2 | 243764 | 88397 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Tmem163 | 72160 | 1919410 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Cntnap5b | 241175 | 3664583 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Cdh9 | 12565 | 107433 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Klhl1 | 93688 | 2136335 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Pex5l | 58869 | 1916672 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Hs3st2 | 195646 | 1333802 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Zdhhc2 | 70546 | 1923452 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Hs3st4 | 628779 | 1333792 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Cntnap5a | 636808 | 3643623 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Rmst | 110333 | 1099806 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Kcnh8 | 211468 | 2445160 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Gabrb2 | 14401 | 95620 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | A330102I10Rik | 77920 | 1925170 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | A230006K03Rik | 27493 | 3644205 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Cntn6 | 53870 | 1858223 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Lrrtm4 | 243499 | 2389180 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Kcnc2 | 268345 | 96668 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Ephb1 | 270190 | 1096337 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Tenm2 | 23964 | 1345184 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Ext1 | 14042 | 894663 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Runx1t1 | 12395 | 104793 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Brinp2 | 240843 | 2443333 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Ncam2 | 17968 | 97282 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Ldb2 | 16826 | 894670 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Pcdh7 | 54216 | 1860487 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Kcnh5 | 238271 | 3584508 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Tafa2 | 268354 | 2143691 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Sgcd | 24052 | 1346525 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Ptprr | 19279 | 109559 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Patj | 12695 | 1277960 | ||||||
| 69 | 19 | Mesencephalic Tectum Glutamatergic | all | Sdk1 | 330222 | 2444413 |