Marker Genes
Dataset: Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding
- tissue: Brain
- ontology: Brain
- genotype: C57BL/6 x DBA/2
- stage:
- treatment condition: WT
- cell/nucleus: Nuclei
- pmid: 29545511
- subset name: all
- total genes: Not reported
- clustering: Jaccard-Louvain
- pseudotime: t-SNE
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE110823
Rows:50
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69 | 18 | Claustrum Pyramidal | all | Cwh43 | 231293 | 2444131 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Nr4a2 | 18227 | 1352456 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Oprk1 | 18387 | 97439 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Ntng2 | 171171 | 2159341 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Rxfp1 | 381489 | 2682211 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Cntnap3 | 238680 | 3588199 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Gnb4 | 14696 | 104581 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Stk32c | 57740 | 2385336 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | B3gat2 | 280645 | 2389490 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Kctd16 | 383348 | 1914659 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Ltbp1 | 268977 | 109151 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Olfm3 | 229759 | 2387329 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Runx2 | 12393 | 99829 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Rasgrp1 | 19419 | 1314635 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Cux2 | 13048 | 107321 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Sulf1 | 240725 | 2138563 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | 6530403H02Rik | 320739 | 2444638 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Lmo4 | 16911 | 109360 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Lypd6 | 320343 | 2443848 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Htr1f | 15557 | 99842 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Adamts3 | 330119 | 3045353 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Fras1 | 231470 | 2385368 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Trpc5 | 22067 | 109524 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Tmem163 | 72160 | 1919410 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Rgs12 | 71729 | 1918979 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Satb2 | 212712 | 2679336 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Zfp804a | 241514 | 2442949 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Npas2 | 18143 | 109232 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Ptpru | 19273 | 1321151 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Samd5 | 320825 | 2444815 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Col11a1 | 12814 | 88446 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Sfmbt2 | 353282 | 2447794 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Kcnip4 | 80334 | 1933131 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Atp2b2 | 11941 | 105368 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Rapgef5 | 217944 | 2444365 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Galnt14 | 71685 | 1918935 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Il1rapl2 | 60367 | 1913106 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Nwd2 | 319807 | 1920464 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Hs3st2 | 195646 | 1333802 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Tmem132d | 243274 | 3044963 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Angpt1 | 11600 | 108448 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Sergef | 27414 | 1351630 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Stt3b | 68292 | 1915542 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Syt1 | 20979 | 99667 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Tmem200a | 77220 | 1924470 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Fstl4 | 320027 | 2443199 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Itga8 | 241226 | 109442 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | R3hdm1 | 226412 | 2448514 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Sv2b | 64176 | 1927338 | ||||||
| 69 | 18 | Claustrum Pyramidal | all | Wdr17 | 244484 | 1924662 |