Marker Genes

Dataset: Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding

  • tissue: Brain
  • ontology: Brain
  • genotype: C57BL/6 x DBA/2
  • stage:
  • treatment condition: WT

Rows:50
dataset id cluster id cluster name cell type name sample id gene symbol entrez geneid species specific geneid
avg log fc (?)
pct 1 pct 2 p value padj
69 17 Cortex Layer 6 Pyramidal - Htr1f all Hs3st4 628779 1333792
69 17 Cortex Layer 6 Pyramidal - Htr1f all Htr1f 15557 99842
69 17 Cortex Layer 6 Pyramidal - Htr1f all Tle4 21888 104633
69 17 Cortex Layer 6 Pyramidal - Htr1f all Syt6 54524 1859544
69 17 Cortex Layer 6 Pyramidal - Htr1f all Khdrbs3 13992 1313312
69 17 Cortex Layer 6 Pyramidal - Htr1f all Rai14 75646 1922896
69 17 Cortex Layer 6 Pyramidal - Htr1f all Nin 18080 105108
69 17 Cortex Layer 6 Pyramidal - Htr1f all Cdh9 12565 107433
69 17 Cortex Layer 6 Pyramidal - Htr1f all Mctp1 78771 1926021
69 17 Cortex Layer 6 Pyramidal - Htr1f all Tiam2 24001 1344338
69 17 Cortex Layer 6 Pyramidal - Htr1f all Etl4 208618 95454
69 17 Cortex Layer 6 Pyramidal - Htr1f all Foxp2 114142 2148705
69 17 Cortex Layer 6 Pyramidal - Htr1f all Sox5 20678 98367
69 17 Cortex Layer 6 Pyramidal - Htr1f all Dlc1 50768 1354949
69 17 Cortex Layer 6 Pyramidal - Htr1f all Dync1i1 13426 107743
69 17 Cortex Layer 6 Pyramidal - Htr1f all Necab1 69352 1916602
69 17 Cortex Layer 6 Pyramidal - Htr1f all Grik3 14807 95816
69 17 Cortex Layer 6 Pyramidal - Htr1f all Pdzd2 68070 1922394
69 17 Cortex Layer 6 Pyramidal - Htr1f all Flrt2 399558 3603594
69 17 Cortex Layer 6 Pyramidal - Htr1f all Lmo7 380928 1353586
69 17 Cortex Layer 6 Pyramidal - Htr1f all Prickle1 106042 1916034
69 17 Cortex Layer 6 Pyramidal - Htr1f all Osbpl10 74486 1921736
69 17 Cortex Layer 6 Pyramidal - Htr1f all Garnl3 99326 2139309
69 17 Cortex Layer 6 Pyramidal - Htr1f all Cdh18 320865 1344366
69 17 Cortex Layer 6 Pyramidal - Htr1f all Frmpd4 333605 3042378
69 17 Cortex Layer 6 Pyramidal - Htr1f all Hs3st2 195646 1333802
69 17 Cortex Layer 6 Pyramidal - Htr1f all Slc35f1 215085 2139810
69 17 Cortex Layer 6 Pyramidal - Htr1f all Prkcg 18752 97597
69 17 Cortex Layer 6 Pyramidal - Htr1f all Mpped1 223726 106316
69 17 Cortex Layer 6 Pyramidal - Htr1f all A830018L16Rik 320492 2444149
69 17 Cortex Layer 6 Pyramidal - Htr1f all Ptprd 19266 97812
69 17 Cortex Layer 6 Pyramidal - Htr1f all Gas7 14457 1202388
69 17 Cortex Layer 6 Pyramidal - Htr1f all Sel1l3 231238 1916941
69 17 Cortex Layer 6 Pyramidal - Htr1f all Tshz3 243931 2442819
69 17 Cortex Layer 6 Pyramidal - Htr1f all Sdk1 330222 2444413
69 17 Cortex Layer 6 Pyramidal - Htr1f all Prkar2b 19088 97760
69 17 Cortex Layer 6 Pyramidal - Htr1f all Cdh11 12552 99217
69 17 Cortex Layer 6 Pyramidal - Htr1f all Slit1 20562 1315203
69 17 Cortex Layer 6 Pyramidal - Htr1f all Adcy1 432530 99677
69 17 Cortex Layer 6 Pyramidal - Htr1f all Npas2 18143 109232
69 17 Cortex Layer 6 Pyramidal - Htr1f all Chsy3 78923 1926173
69 17 Cortex Layer 6 Pyramidal - Htr1f all Sez6 20370 104745
69 17 Cortex Layer 6 Pyramidal - Htr1f all Vcan 13003 102889
69 17 Cortex Layer 6 Pyramidal - Htr1f all Pak7 241656 1920334
69 17 Cortex Layer 6 Pyramidal - Htr1f all Neto2 74513 1921763
69 17 Cortex Layer 6 Pyramidal - Htr1f all Fhod3 225288 1925847
69 17 Cortex Layer 6 Pyramidal - Htr1f all Mical2 320878 2444947
69 17 Cortex Layer 6 Pyramidal - Htr1f all Tmem178 68027 1915277
69 17 Cortex Layer 6 Pyramidal - Htr1f all Rgs6 50779 1354730
69 17 Cortex Layer 6 Pyramidal - Htr1f all Cyth3 19159 1335107