Marker Genes

Dataset: Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding

  • tissue: Brain
  • ontology: Brain
  • genotype: C57BL/6 x DBA/2
  • stage:
  • treatment condition: WT

Rows:50
dataset id cluster id cluster name cell type name sample id gene symbol entrez geneid species specific geneid
avg log fc (?)
pct 1 pct 2 p value padj
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Nr4a2 18227 1352456
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Cobll1 319876 2442894
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Rxfp1 381489 2682211
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Dlc1 50768 1354949
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Etl4 208618 95454
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Adgra1 52389 1277167
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Tle4 21888 104633
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Sema3e 20349 1340034
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Khdrbs3 13992 1313312
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Hs3st4 628779 1333792
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Brinp3 215378 2443035
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Cdh9 12565 107433
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Tshz2 228911 2153084
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Pcsk5 18552 97515
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Grik3 14807 95816
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Rai14 75646 1922896
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Ptpru 19273 1321151
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Igsf21 230868 2681842
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Tshz3 243931 2442819
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Grb14 50915 1355324
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Nin 18080 105108
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Sox5 20678 98367
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Pde1a 18573 1201792
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Npas2 18143 109232
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Slit1 20562 1315203
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Lmo3 109593 102810
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Egfem1 75740 1922990
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Ryr3 20192 99684
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Mcc 328949 96930
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Cdh11 12552 99217
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Galnt18 233733 2446239
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Mlip 69642 1916892
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Prickle1 106042 1916034
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Serpini1 20713 1194506
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all B3gat1 76898 1924148
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Cntnap4 170571 2183572
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Thsd7b 210417 2443925
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Shisa6 380702 2685725
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Dlg2 23859 1344351
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Dync1i1 13426 107743
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Lrrtm4 243499 2389180
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Nrp1 18186 106206
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Rasgrf2 19418 109137
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Tenm3 23965 1345183
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Gria3 53623 95810
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Ptprd 19266 97812
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Zfpm2 22762 1334444
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Mpped1 223726 106316
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Tenm2 23964 1345184
69 16 Cortex Layer5/Layer 6 Pyramidal- Npr3 all Lmo7 380928 1353586