Marker Genes

Dataset: Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding

  • tissue: Brain
  • ontology: Brain
  • genotype: C57BL/6 x DBA/2
  • stage:
  • treatment condition: WT

Rows:50
dataset id cluster id cluster name cell type name sample id gene symbol entrez geneid species specific geneid
avg log fc (?)
pct 1 pct 2 p value padj
69 11 Cortex Layer 4/Layer 5 Pyramidal all Tafa1 320265 2443695
69 11 Cortex Layer 4/Layer 5 Pyramidal all Tafa2 268354 2143691
69 11 Cortex Layer 4/Layer 5 Pyramidal all 6530403H02Rik 320739 2444638
69 11 Cortex Layer 4/Layer 5 Pyramidal all Gda 14544 95678
69 11 Cortex Layer 4/Layer 5 Pyramidal all Pdzrn4 239618 3056996
69 11 Cortex Layer 4/Layer 5 Pyramidal all Lmo3 109593 102810
69 11 Cortex Layer 4/Layer 5 Pyramidal all Nrp2 18187 1100492
69 11 Cortex Layer 4/Layer 5 Pyramidal all Lmo7 380928 1353586
69 11 Cortex Layer 4/Layer 5 Pyramidal all Slit3 20564 1315202
69 11 Cortex Layer 4/Layer 5 Pyramidal all Epha6 13840 108034
69 11 Cortex Layer 4/Layer 5 Pyramidal all Il1rapl2 60367 1913106
69 11 Cortex Layer 4/Layer 5 Pyramidal all L3mbtl4 320858 2444889
69 11 Cortex Layer 4/Layer 5 Pyramidal all Ptprd 19266 97812
69 11 Cortex Layer 4/Layer 5 Pyramidal all Mlip 69642 1916892
69 11 Cortex Layer 4/Layer 5 Pyramidal all Fras1 231470 2385368
69 11 Cortex Layer 4/Layer 5 Pyramidal all Dpyd 99586 2139667
69 11 Cortex Layer 4/Layer 5 Pyramidal all Epha3 13837 99612
69 11 Cortex Layer 4/Layer 5 Pyramidal all Lingo2 242384 2442298
69 11 Cortex Layer 4/Layer 5 Pyramidal all Camk2a 12322 88256
69 11 Cortex Layer 4/Layer 5 Pyramidal all 5730522E02Rik 70626 1917876
69 11 Cortex Layer 4/Layer 5 Pyramidal all Unc5d 210801 2389364
69 11 Cortex Layer 4/Layer 5 Pyramidal all Cntn5 244682 3042287
69 11 Cortex Layer 4/Layer 5 Pyramidal all Ndst4 64580 1932545
69 11 Cortex Layer 4/Layer 5 Pyramidal all Efnb2 13642 105097
69 11 Cortex Layer 4/Layer 5 Pyramidal all Crtac1 72832 1920082
69 11 Cortex Layer 4/Layer 5 Pyramidal all Dab1 13131 108554
69 11 Cortex Layer 4/Layer 5 Pyramidal all Epha5 13839 99654
69 11 Cortex Layer 4/Layer 5 Pyramidal all Cpne4 74020 1921270
69 11 Cortex Layer 4/Layer 5 Pyramidal all Egfem1 75740 1922990
69 11 Cortex Layer 4/Layer 5 Pyramidal all Acvr2a 11480 102806
69 11 Cortex Layer 4/Layer 5 Pyramidal all Prkcg 18752 97597
69 11 Cortex Layer 4/Layer 5 Pyramidal all Ppfibp1 67533 1914783
69 11 Cortex Layer 4/Layer 5 Pyramidal all Nwd2 319807 1920464
69 11 Cortex Layer 4/Layer 5 Pyramidal all Arhgef28 110596 1346016
69 11 Cortex Layer 4/Layer 5 Pyramidal all Gm26871 102634933 5477365
69 11 Cortex Layer 4/Layer 5 Pyramidal all Cntn6 53870 1858223
69 11 Cortex Layer 4/Layer 5 Pyramidal all Slc16a2 20502 1203732
69 11 Cortex Layer 4/Layer 5 Pyramidal all Tmem200a 77220 1924470
69 11 Cortex Layer 4/Layer 5 Pyramidal all Bcl11b 58208 1929913
69 11 Cortex Layer 4/Layer 5 Pyramidal all Pde1a 18573 1201792
69 11 Cortex Layer 4/Layer 5 Pyramidal all Nkain2 432450 1923447
69 11 Cortex Layer 4/Layer 5 Pyramidal all Celf2 14007 1338822
69 11 Cortex Layer 4/Layer 5 Pyramidal all Hs3st2 195646 1333802
69 11 Cortex Layer 4/Layer 5 Pyramidal all Kcnip4 80334 1933131
69 11 Cortex Layer 4/Layer 5 Pyramidal all A930011G23Rik 319818 2442790
69 11 Cortex Layer 4/Layer 5 Pyramidal all Sdccag8 76816 1924066
69 11 Cortex Layer 4/Layer 5 Pyramidal all Dner 227325 2152889
69 11 Cortex Layer 4/Layer 5 Pyramidal all Cntnap5a 636808 3643623
69 11 Cortex Layer 4/Layer 5 Pyramidal all Sv2b 64176 1927338
69 11 Cortex Layer 4/Layer 5 Pyramidal all Adgrb1 107831 1933736