Marker Genes
Dataset: Single-cell transcriptomics of the mouse kidney reveals potential cellular targets of kidney disease
- tissue: Kidney
- ontology: Kidney
- genotype: C57BL/6
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 29622724
- subset name: all
- total genes: 16383
- clustering: Seurat
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE107585
Rows:15
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68 | 7 | CD-IC | all | Atp6v1g3 | 338375 | 2450548 | 3.96 | 99.2 | 9.9 | 0 | 0 | |
| 68 | 7 | CD-IC | all | Atp6v0d2 | 242341 | 1924415 | 1.93 | 81.3 | 1.1 | 0 | 0 | |
| 68 | 7 | CD-IC | all | Hmx2 | 15372 | 107159 | 1.81 | 45.7 | 1 | 0 | 0 | |
| 68 | 7 | CD-IC | all | Car2 | 12349 | 88269 | 1.71 | 94.3 | 40.9 | 0 | 0 | |
| 68 | 7 | CD-IC | all | Oxgr1 | 239283 | 2685145 | 1.55 | 63.4 | 2.1 | 0 | 0 | |
| 68 | 7 | CD-IC | all | Mme | 17380 | 97004 | 1.16 | 41.5 | 4.7 | 0 | 0 | |
| 68 | 7 | CD-IC | all | Tmem61 | 329909 | 3041156 | 1.03 | 40.5 | 0.5 | 0 | 0 | |
| 68 | 7 | CD-IC | all | Slc25a4 | 11739 | 1353495 | 0.99 | 88.6 | 51.5 | 0 | 0 | |
| 68 | 7 | CD-IC | all | Fam13a | 58909 | 1889842 | 0.92 | 59.3 | 16.9 | 0 | 0 | |
| 68 | 7 | CD-IC | all | Uqcrb | 67530 | 1914780 | 0.82 | 97.6 | 84.1 | 0 | 0 | |
| 68 | 7 | CD-IC | all | 9130008F23Rik | 71583 | 1918833 | 0.72 | 33.7 | 0.2 | 0 | 0 | |
| 68 | 7 | CD-IC | all | Chchd10 | 103172 | 2143558 | 0.7 | 98.4 | 86.4 | 0 | 0 | |
| 68 | 7 | CD-IC | all | Mif | 17319 | 96982 | 0.69 | 94.3 | 72 | 0 | 0 | |
| 68 | 7 | CD-IC | all | Tbc1d24 | 224617 | 2443456 | 0.65 | 32.9 | 1.9 | 0 | 0 | |
| 68 | 7 | CD-IC | all | Cycs | 13063 | 88578 | 0.64 | 97.7 | 82.3 | 2.75e-290 | 2.77e-288 |