Marker Genes
Dataset: Single-cell transcriptomics of the mouse kidney reveals potential cellular targets of kidney disease
- tissue: Kidney
- ontology: Kidney
- genotype: C57BL/6
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 29622724
- subset name: all
- total genes: 16383
- clustering: Seurat
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE107585
Rows:43
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
68 | 6 | CD-PC | all | Aqp2 | 11827 | 1096865 | 3.59 | 96.2 | 2.5 | 0 | 0 | |
68 | 6 | CD-PC | all | Hsd11b2 | 15484 | 104720 | 3.36 | 99.1 | 3.1 | 0 | 0 | |
68 | 6 | CD-PC | all | Fxyd4 | 108017 | 1889005 | 3.2 | 73 | 3 | 0 | 0 | |
68 | 6 | CD-PC | all | Apela | 100038489 | 3642370 | 2.3 | 74.7 | 2.1 | 0 | 0 | |
68 | 6 | CD-PC | all | Aqp3 | 11828 | 1333777 | 2.29 | 79.4 | 5.1 | 0 | 0 | |
68 | 6 | CD-PC | all | Npnt | 114249 | 2148811 | 1.85 | 72 | 9.2 | 0 | 0 | |
68 | 6 | CD-PC | all | Scnn1b | 20277 | 104696 | 1.74 | 73.4 | 3.5 | 0 | 0 | |
68 | 6 | CD-PC | all | Wfdc2 | 67701 | 1914951 | 1.72 | 90.8 | 22.6 | 0 | 0 | |
68 | 6 | CD-PC | all | Kcne1 | 16509 | 96673 | 1.65 | 62.6 | 0.6 | 0 | 0 | |
68 | 6 | CD-PC | all | Scnn1g | 20278 | 104695 | 1.51 | 62.5 | 1.8 | 0 | 0 | |
68 | 6 | CD-PC | all | Hes1 | 15205 | 104853 | 1.49 | 63.8 | 11.4 | 0 | 0 | |
68 | 6 | CD-PC | all | Cav1 | 12389 | 102709 | 1.49 | 60.2 | 1.4 | 0 | 0 | |
68 | 6 | CD-PC | all | Cdh16 | 12556 | 106671 | 1.46 | 93.6 | 39 | 0 | 0 | |
68 | 6 | CD-PC | all | Adgrg1 | 14766 | 1340051 | 1.44 | 72 | 11.7 | 0 | 0 | |
68 | 6 | CD-PC | all | Cav2 | 12390 | 107571 | 1.43 | 60.7 | 2.9 | 0 | 0 | |
68 | 6 | CD-PC | all | Nudt4 | 71207 | 1918457 | 1.43 | 89.1 | 32.2 | 0 | 0 | |
68 | 6 | CD-PC | all | Tspan8 | 216350 | 2384918 | 1.37 | 64.1 | 7.7 | 0 | 0 | |
68 | 6 | CD-PC | all | Kcnj1 | 56379 | 1927248 | 1.21 | 71.7 | 16.3 | 6.02e-294 | 2e-291 | |
68 | 6 | CD-PC | all | Cdo1 | 12583 | 105925 | 1.19 | 58.4 | 9.8 | 2.96e-302 | 1.07e-299 | |
68 | 6 | CD-PC | all | Tmem45b | 235135 | 2384574 | 1.12 | 44.5 | 1.3 | 0 | 0 | |
68 | 6 | CD-PC | all | Tacstd2 | 56753 | 1861606 | 1.04 | 41.7 | 3.2 | 4.56e-286 | 1.43e-283 | |
68 | 6 | CD-PC | all | Olfm1 | 56177 | 1860437 | 1.03 | 44 | 1.6 | 0 | 0 | |
68 | 6 | CD-PC | all | Avpr2 | 12000 | 88123 | 1.02 | 36.9 | 0.4 | 0 | 0 | |
68 | 6 | CD-PC | all | Pdzk1ip1 | 67182 | 1914432 | 0.99 | 92.1 | 67.2 | 9.57e-274 | 2.88e-271 | |
68 | 6 | CD-PC | all | L1cam | 16728 | 96721 | 0.97 | 38.9 | 1 | 0 | 0 | |
68 | 6 | CD-PC | all | Cldn4 | 12740 | 1313314 | 0.93 | 34.9 | 1.5 | 1.03e-294 | 3.49e-292 | |
68 | 6 | CD-PC | all | Tbck | 271981 | 2445052 | 0.9 | 38 | 5 | 4.21e-203 | 9.51e-201 | |
68 | 6 | CD-PC | all | BC018473 | 193217 | 3039625 | 0.87 | 14.9 | 0.6 | 1.48e-131 | 1.87e-129 | |
68 | 6 | CD-PC | all | Ivns1abp | 117198 | 2152389 | 0.84 | 83.9 | 47.1 | 2.59e-203 | 5.93e-201 | |
68 | 6 | CD-PC | all | Tmem229a | 319832 | 2442812 | 0.79 | 53.8 | 20.4 | 2.06e-126 | 2.46e-124 | |
68 | 6 | CD-PC | all | Gstt1 | 14871 | 107379 | 0.78 | 49.8 | 16.9 | 6.55e-121 | 6.97e-119 | |
68 | 6 | CD-PC | all | Gprc5b | 64297 | 1927596 | 0.78 | 29.3 | 0.3 | 0 | 0 | |
68 | 6 | CD-PC | all | Tmem178 | 68027 | 1915277 | 0.72 | 31.8 | 4.2 | 6.9e-153 | 1.04e-150 | |
68 | 6 | CD-PC | all | Gm11783 | 621549 | 3649458 | 0.67 | 25.2 | 1.8 | 3.7e-162 | 6.14e-160 | |
68 | 6 | CD-PC | all | Phactr1 | 218194 | 2659021 | 0.66 | 27.9 | 2.2 | 1.25e-174 | 2.33e-172 | |
68 | 6 | CD-PC | all | Celsr2 | 53883 | 1858235 | 0.63 | 36.2 | 9.4 | 4.47e-100 | 3.71e-98 | |
68 | 6 | CD-PC | all | Fzd7 | 14369 | 108570 | 0.6 | 21.8 | 1.2 | 1.15e-161 | 1.87e-159 | |
68 | 6 | CD-PC | all | Myh10 | 77579 | 1930780 | 0.6 | 25.7 | 3.1 | 8.86e-129 | 1.1e-126 | |
68 | 6 | CD-PC | all | Slc2a9 | 117591 | 2152844 | 0.58 | 19.7 | 1.8 | 5.01e-113 | 4.8e-111 | |
68 | 6 | CD-PC | all | Rnf186 | 66825 | 1914075 | 0.58 | 26.8 | 5.1 | 7.23e-92 | 5.63e-90 | |
68 | 6 | CD-PC | all | Trpv5 | 194352 | 2429764 | 0.56 | 19.9 | 1.8 | 1.21e-113 | 1.18e-111 | |
68 | 6 | CD-PC | all | Stc1 | 20855 | 109131 | 0.51 | 14.9 | 0.1 | 1.67e-172 | 2.99e-170 | |
68 | 6 | CD-PC | all | Peli2 | 93834 | 1891445 | 0.5 | 26.2 | 6.9 | 5.34e-67 | 3.25e-65 |