Marker Genes
Dataset: Single-cell transcriptomics of the mouse kidney reveals potential cellular targets of kidney disease
- tissue: Kidney
- ontology: Kidney
- genotype: C57BL/6
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 29622724
- subset name: all
- total genes: 16383
- clustering: Seurat
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE107585
Rows:24
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
68 | 5 | DCT | all | Slc12a3 | 20497 | 108114 | 2.94 | 85.4 | 8.1 | 0 | 0 | |
68 | 5 | DCT | all | Calb1 | 12307 | 88248 | 2.51 | 77.2 | 16.8 | 0 | 0 | |
68 | 5 | DCT | all | Wnk1 | 232341 | 2442092 | 2.15 | 92.2 | 26.7 | 0 | 0 | |
68 | 5 | DCT | all | Pvalb | 19293 | 97821 | 1.87 | 47.3 | 4.1 | 0 | 0 | |
68 | 5 | DCT | all | Pgam2 | 56012 | 1933118 | 1.51 | 63.2 | 6.2 | 0 | 0 | |
68 | 5 | DCT | all | Wnk4 | 69847 | 1917097 | 1.2 | 58.6 | 10.9 | 0 | 0 | |
68 | 5 | DCT | all | Sgms2 | 74442 | 1921692 | 1.15 | 50.3 | 9.3 | 0 | 0 | |
68 | 5 | DCT | all | Slc16a7 | 20503 | 1330284 | 1.07 | 46.1 | 4.5 | 0 | 0 | |
68 | 5 | DCT | all | Lhx1 | 16869 | 99783 | 1.06 | 45.4 | 7.4 | 0 | 0 | |
68 | 5 | DCT | all | Abca13 | 268379 | 2388707 | 1 | 38.7 | 1.8 | 0 | 0 | |
68 | 5 | DCT | all | Hoxb5os | 75395 | 1922645 | 0.96 | 40.2 | 4.4 | 0 | 0 | |
68 | 5 | DCT | all | Emx1 | 13796 | 95387 | 0.96 | 41.8 | 6.1 | 0 | 0 | |
68 | 5 | DCT | all | Trpm6 | 225997 | 2675603 | 0.86 | 32.3 | 0.9 | 0 | 0 | |
68 | 5 | DCT | all | Cwh43 | 231293 | 2444131 | 0.84 | 29.3 | 1.5 | 0 | 0 | |
68 | 5 | DCT | all | COX1 | 17708 | 102504 | 0.76 | 100 | 99.9 | 0 | 0 | |
68 | 5 | DCT | all | Oxct1 | 67041 | 1914291 | 0.74 | 81.3 | 56 | 0 | 0 | |
68 | 5 | DCT | all | Trpm7 | 58800 | 1929996 | 0.73 | 44.9 | 16.3 | 0 | 0 | |
68 | 5 | DCT | all | Papss1 | 23971 | 1330587 | 0.63 | 30.3 | 7.3 | 0 | 0 | |
68 | 5 | DCT | all | Uroc1 | 243537 | 2385332 | 0.62 | 21.1 | 0.8 | 0 | 0 | |
68 | 5 | DCT | all | Tfrc | 22042 | 98822 | 0.6 | 26.1 | 6.4 | 0 | 0 | |
68 | 5 | DCT | all | Lhx1os | 78365 | 1925615 | 0.6 | 32.4 | 9.4 | 0 | 0 | |
68 | 5 | DCT | all | Tsc22d2 | 72033 | 1919283 | 0.55 | 27.9 | 7.2 | 0 | 0 | |
68 | 5 | DCT | all | Larp1b | 214048 | 1914604 | 0.5 | 33.5 | 14.6 | 0 | 0 | |
68 | 5 | DCT | all | Gm15848 | 102640771 | 3802054 | 0.5 | 14.6 | 1.7 | 0 | 0 |