Marker Genes
Dataset: Single-cell transcriptomics of the mouse kidney reveals potential cellular targets of kidney disease
- tissue: Kidney
- ontology: Kidney
- genotype: C57BL/6
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 29622724
- subset name: all
- total genes: 16383
- clustering: Seurat
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE107585
Rows:119
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68 | 3 | PT | all | Miox | 56727 | 1891725 | 1.62 | 92.8 | 43.9 | 0 | 0 | |
| 68 | 3 | PT | all | Slc34a1 | 20505 | 1345284 | 1.58 | 91.8 | 49.3 | 0 | 0 | |
| 68 | 3 | PT | all | Akr1c21 | 77337 | 1924587 | 1.46 | 79.2 | 36.6 | 0 | 0 | |
| 68 | 3 | PT | all | Ttc36 | 192653 | 2384760 | 1.42 | 81.1 | 32.1 | 0 | 0 | |
| 68 | 3 | PT | all | Slc27a2 | 26458 | 1347099 | 1.41 | 73.5 | 22.7 | 0 | 0 | |
| 68 | 3 | PT | all | Acsm2 | 233799 | 2385289 | 1.39 | 88.5 | 36.3 | 0 | 0 | |
| 68 | 3 | PT | all | Ass1 | 11898 | 88090 | 1.37 | 77.4 | 24.5 | 0 | 0 | |
| 68 | 3 | PT | all | Gpx1 | 14775 | 104887 | 1.35 | 95.4 | 69.1 | 0 | 0 | |
| 68 | 3 | PT | all | Pck1 | 18534 | 97501 | 1.33 | 77.8 | 36.7 | 0 | 0 | |
| 68 | 3 | PT | all | Lrp2 | 14725 | 95794 | 1.33 | 72.9 | 19.7 | 0 | 0 | |
| 68 | 3 | PT | all | Cela1 | 109901 | 95314 | 1.31 | 76.6 | 33.6 | 0 | 0 | |
| 68 | 3 | PT | all | Guca2b | 14916 | 1270851 | 1.3 | 67.2 | 29.4 | 0 | 0 | |
| 68 | 3 | PT | all | Fut9 | 14348 | 1330859 | 1.29 | 75.6 | 31.6 | 0 | 0 | |
| 68 | 3 | PT | all | Rida | 15473 | 1095401 | 1.25 | 81.3 | 41.8 | 0 | 0 | |
| 68 | 3 | PT | all | Keg1 | 64697 | 1928492 | 1.24 | 65.2 | 15.9 | 0 | 0 | |
| 68 | 3 | PT | all | Khk | 16548 | 1096353 | 1.19 | 70.6 | 22.2 | 0 | 0 | |
| 68 | 3 | PT | all | Calml4 | 75600 | 1922850 | 1.19 | 61.9 | 15.7 | 0 | 0 | |
| 68 | 3 | PT | all | Dnase1 | 13419 | 103157 | 1.19 | 66.4 | 32.6 | 0 | 0 | |
| 68 | 3 | PT | all | Sord | 20322 | 98266 | 1.17 | 81.2 | 45.9 | 0 | 0 | |
| 68 | 3 | PT | all | Slc4a4 | 54403 | 1927555 | 1.15 | 70.2 | 32.3 | 0 | 0 | |
| 68 | 3 | PT | all | Nat8f1 | 66116 | 1913366 | 1.14 | 61.2 | 17.5 | 0 | 0 | |
| 68 | 3 | PT | all | Glyat | 107146 | 2147502 | 1.13 | 61 | 14.6 | 0 | 0 | |
| 68 | 3 | PT | all | Pdzk1 | 59020 | 1928901 | 1.12 | 68.3 | 19.2 | 0 | 0 | |
| 68 | 3 | PT | all | Fbp1 | 14121 | 95492 | 1.08 | 61.3 | 17.2 | 0 | 0 | |
| 68 | 3 | PT | all | Cda | 72269 | 1919519 | 1.08 | 52.5 | 11.2 | 0 | 0 | |
| 68 | 3 | PT | all | Acy3 | 71670 | 1918920 | 1.08 | 77.6 | 55.6 | 0 | 0 | |
| 68 | 3 | PT | all | Errfi1 | 74155 | 1921405 | 1.07 | 62.9 | 20.7 | 0 | 0 | |
| 68 | 3 | PT | all | Kcnj15 | 16516 | 1310000 | 1.04 | 56.9 | 13.7 | 0 | 0 | |
| 68 | 3 | PT | all | Cyp2j5 | 13109 | 1270149 | 1.04 | 55 | 13.5 | 0 | 0 | |
| 68 | 3 | PT | all | Snhg11 | 319317 | 2441845 | 1.01 | 23.8 | 4.1 | 0 | 0 | |
| 68 | 3 | PT | all | Slc22a6 | 18399 | 892001 | 1.01 | 40.7 | 9.6 | 0 | 0 | |
| 68 | 3 | PT | all | Akr1a1 | 58810 | 1929955 | 1.01 | 87 | 57.7 | 0 | 0 | |
| 68 | 3 | PT | all | Slc22a12 | 20521 | 1195269 | 1 | 49.2 | 12 | 0 | 0 | |
| 68 | 3 | PT | all | 4931406C07Rik | 70984 | 1918234 | 0.99 | 60.1 | 20.9 | 0 | 0 | |
| 68 | 3 | PT | all | Dnajc12 | 30045 | 1353428 | 0.98 | 47.6 | 13.3 | 0 | 0 | |
| 68 | 3 | PT | all | Cndp2 | 66054 | 1913304 | 0.97 | 71.8 | 55.8 | 0 | 0 | |
| 68 | 3 | PT | all | Slc47a1 | 67473 | 1914723 | 0.96 | 43.6 | 9 | 0 | 0 | |
| 68 | 3 | PT | all | G6pc | 14377 | 95607 | 0.95 | 42.8 | 10.8 | 0 | 0 | |
| 68 | 3 | PT | all | Nox4 | 50490 | 1354184 | 0.94 | 50.9 | 20 | 0 | 0 | |
| 68 | 3 | PT | all | Slc17a1 | 20504 | 103209 | 0.93 | 43 | 9.4 | 0 | 0 | |
| 68 | 3 | PT | all | Slc13a3 | 114644 | 2149635 | 0.93 | 40.6 | 9.2 | 0 | 0 | |
| 68 | 3 | PT | all | Mep1a | 17287 | 96963 | 0.9 | 36.2 | 8.8 | 0 | 0 | |
| 68 | 3 | PT | all | Slc6a19 | 74338 | 1921588 | 0.9 | 43.8 | 19.6 | 0 | 0 | |
| 68 | 3 | PT | all | Bdh2 | 69772 | 1917022 | 0.89 | 43.9 | 9.9 | 0 | 0 | |
| 68 | 3 | PT | all | Tnfaip8 | 106869 | 2147191 | 0.88 | 52.8 | 19.6 | 0 | 0 | |
| 68 | 3 | PT | all | Scp2 | 20280 | 98254 | 0.88 | 77.5 | 46.9 | 0 | 0 | |
| 68 | 3 | PT | all | Ugt3a2 | 223337 | 2145969 | 0.88 | 40.6 | 9.1 | 0 | 0 | |
| 68 | 3 | PT | all | Tmem174 | 68344 | 1915594 | 0.87 | 41.9 | 9.4 | 0 | 0 | |
| 68 | 3 | PT | all | Slc22a30 | 319800 | 2442750 | 0.87 | 26.3 | 3.9 | 0 | 0 | |
| 68 | 3 | PT | all | Pecr | 111175 | 2148199 | 0.87 | 39.4 | 9.3 | 0 | 0 | |
| 68 | 3 | PT | all | Nat8 | 68396 | 1915646 | 0.87 | 32.5 | 6.3 | 0 | 0 | |
| 68 | 3 | PT | all | Acox1 | 11430 | 1330812 | 0.87 | 55.6 | 23.5 | 0 | 0 | |
| 68 | 3 | PT | all | Cyp2e1 | 13106 | 88607 | 0.86 | 49.4 | 17.7 | 0 | 0 | |
| 68 | 3 | PT | all | Slc22a8 | 19879 | 1336187 | 0.85 | 38.9 | 8.2 | 0 | 0 | |
| 68 | 3 | PT | all | Folr1 | 14275 | 95568 | 0.84 | 42.4 | 10.5 | 0 | 0 | |
| 68 | 3 | PT | all | Defb29 | 75400 | 1922650 | 0.83 | 36.3 | 8.5 | 0 | 0 | |
| 68 | 3 | PT | all | Hao2 | 56185 | 96012 | 0.83 | 40.8 | 11.1 | 0 | 0 | |
| 68 | 3 | PT | all | Acaa1b | 235674 | 3605455 | 0.82 | 37.4 | 8.8 | 0 | 0 | |
| 68 | 3 | PT | all | Hykk | 235386 | 2443139 | 0.81 | 37.7 | 7.7 | 0 | 0 | |
| 68 | 3 | PT | all | Fth1 | 14319 | 95588 | 0.79 | 99.8 | 99.3 | 0 | 0 | |
| 68 | 3 | PT | all | Ccdc107 | 622404 | 1913423 | 0.79 | 53.8 | 23.9 | 0 | 0 | |
| 68 | 3 | PT | all | Ces1f | 234564 | 2142687 | 0.77 | 40.3 | 12.7 | 0 | 0 | |
| 68 | 3 | PT | all | Cat | 12359 | 88271 | 0.77 | 60 | 29.9 | 0 | 0 | |
| 68 | 3 | PT | all | Ugt2b38 | 100559 | 2140794 | 0.77 | 70.3 | 52 | 0 | 0 | |
| 68 | 3 | PT | all | Inmt | 21743 | 102963 | 0.77 | 59.5 | 28 | 0 | 0 | |
| 68 | 3 | PT | all | 4833439L19Rik | 97820 | 1921162 | 0.76 | 68.5 | 42 | 0 | 0 | |
| 68 | 3 | PT | all | Slc7a13 | 74087 | 1921337 | 0.76 | 35.9 | 12.5 | 0 | 0 | |
| 68 | 3 | PT | all | Nudt19 | 110959 | 94203 | 0.75 | 58.7 | 30.5 | 0 | 0 | |
| 68 | 3 | PT | all | Fmo2 | 55990 | 1916776 | 0.74 | 37.2 | 8.7 | 0 | 0 | |
| 68 | 3 | PT | all | Ak4 | 11639 | 87979 | 0.74 | 34.9 | 7.6 | 0 | 0 | |
| 68 | 3 | PT | all | Xylb | 102448 | 2142985 | 0.74 | 36.5 | 8.1 | 0 | 0 | |
| 68 | 3 | PT | all | Slc22a28 | 434674 | 3645714 | 0.74 | 25.3 | 3.8 | 0 | 0 | |
| 68 | 3 | PT | all | Pipox | 19193 | 1197006 | 0.73 | 34.8 | 7.9 | 0 | 0 | |
| 68 | 3 | PT | all | Neu1 | 18010 | 97305 | 0.73 | 41.9 | 17 | 0 | 0 | |
| 68 | 3 | PT | all | Akr7a5 | 110198 | 107796 | 0.73 | 50.7 | 23.3 | 0 | 0 | |
| 68 | 3 | PT | all | Macrod2 | 72899 | 1920149 | 0.72 | 36.7 | 10.3 | 0 | 0 | |
| 68 | 3 | PT | all | Slc5a8 | 216225 | 2384916 | 0.72 | 27 | 5.7 | 0 | 0 | |
| 68 | 3 | PT | all | Slc22a1 | 20517 | 108111 | 0.72 | 32.2 | 7.3 | 0 | 0 | |
| 68 | 3 | PT | all | Trim7 | 94089 | 2137353 | 0.71 | 29.2 | 5.8 | 0 | 0 | |
| 68 | 3 | PT | all | Gpd1 | 14555 | 95679 | 0.71 | 36.9 | 10.5 | 0 | 0 | |
| 68 | 3 | PT | all | Aldh6a1 | 104776 | 1915077 | 0.71 | 55.7 | 29.3 | 0 | 0 | |
| 68 | 3 | PT | all | Ghr | 14600 | 95708 | 0.7 | 41.7 | 17.5 | 0 | 0 | |
| 68 | 3 | PT | all | Upb1 | 103149 | 2143535 | 0.7 | 29.9 | 5.4 | 0 | 0 | |
| 68 | 3 | PT | all | Aspdh | 68352 | 1915602 | 0.69 | 26.6 | 4 | 0 | 0 | |
| 68 | 3 | PT | all | Rab11fip3 | 215445 | 2444431 | 0.69 | 36.3 | 10.7 | 0 | 0 | |
| 68 | 3 | PT | all | Slc17a3 | 105355 | 2389216 | 0.69 | 28.2 | 5.8 | 0 | 0 | |
| 68 | 3 | PT | all | Car14 | 23831 | 1344341 | 0.68 | 30.6 | 6.6 | 0 | 0 | |
| 68 | 3 | PT | all | Slc37a4 | 14385 | 1316650 | 0.66 | 32.2 | 9 | 0 | 0 | |
| 68 | 3 | PT | all | Nat8f6 | 100504710 | 3779382 | 0.66 | 19 | 2.4 | 0 | 0 | |
| 68 | 3 | PT | all | Slc22a18 | 18400 | 1336884 | 0.66 | 30.6 | 8 | 0 | 0 | |
| 68 | 3 | PT | all | Tcn2 | 21452 | 98534 | 0.65 | 63.6 | 42.5 | 0 | 0 | |
| 68 | 3 | PT | all | Gcdh | 270076 | 104541 | 0.65 | 39.3 | 15.4 | 0 | 0 | |
| 68 | 3 | PT | all | D630029K05Rik | 103175 | 2143561 | 0.65 | 25.7 | 4.8 | 0 | 0 | |
| 68 | 3 | PT | all | Slc7a7 | 20540 | 1337120 | 0.64 | 26.6 | 6.7 | 0 | 0 | |
| 68 | 3 | PT | all | Gstz1 | 14874 | 1341859 | 0.64 | 34.6 | 11.1 | 0 | 0 | |
| 68 | 3 | PT | all | Tmem150a | 232086 | 2385244 | 0.62 | 25.1 | 4.7 | 0 | 0 | |
| 68 | 3 | PT | all | Asl | 109900 | 88084 | 0.61 | 34.7 | 13.2 | 0 | 0 | |
| 68 | 3 | PT | all | Ldhd | 52815 | 106428 | 0.61 | 25.9 | 7.7 | 0 | 0 | |
| 68 | 3 | PT | all | Prodh2 | 56189 | 1929093 | 0.61 | 23.5 | 4.7 | 0 | 0 | |
| 68 | 3 | PT | all | Slc6a18 | 22598 | 1336892 | 0.59 | 20.3 | 4.4 | 0 | 0 | |
| 68 | 3 | PT | all | Mettl26 | 68347 | 1915597 | 0.59 | 45.1 | 24.3 | 0 | 0 | |
| 68 | 3 | PT | all | Fah | 14085 | 95482 | 0.58 | 32.7 | 11.5 | 0 | 0 | |
| 68 | 3 | PT | all | Prodh | 19125 | 97770 | 0.58 | 33.4 | 12.8 | 0 | 0 | |
| 68 | 3 | PT | all | Hspe1 | 15528 | 104680 | 0.58 | 74.4 | 59.5 | 0 | 0 | |
| 68 | 3 | PT | all | Cyp2d26 | 76279 | 1923529 | 0.57 | 24.2 | 6.3 | 0 | 0 | |
| 68 | 3 | PT | all | Prss8 | 76560 | 1923810 | 0.57 | 37.5 | 16.8 | 0 | 0 | |
| 68 | 3 | PT | all | Ces1d | 104158 | 2148202 | 0.56 | 24.7 | 7.2 | 0 | 0 | |
| 68 | 3 | PT | all | Gm10804 | 100038525 | 3641755 | 0.56 | 22.1 | 3.4 | 0 | 0 | |
| 68 | 3 | PT | all | Ephx2 | 13850 | 99500 | 0.55 | 27 | 8.6 | 0 | 0 | |
| 68 | 3 | PT | all | Slco1a6 | 28254 | 1351906 | 0.54 | 17.7 | 3.4 | 0 | 0 | |
| 68 | 3 | PT | all | Ugt3a1 | 105887 | 2146055 | 0.54 | 19.4 | 4 | 0 | 0 | |
| 68 | 3 | PT | all | Slc6a20b | 22599 | 1336891 | 0.52 | 20.7 | 3.8 | 0 | 0 | |
| 68 | 3 | PT | all | Eci3 | 69123 | 1916373 | 0.52 | 20.5 | 4.3 | 0 | 0 | |
| 68 | 3 | PT | all | Acox3 | 80911 | 1933156 | 0.51 | 26.5 | 9.6 | 0 | 0 | |
| 68 | 3 | PT | all | Mpv17l | 93734 | 2135951 | 0.51 | 23 | 8.3 | 0 | 0 | |
| 68 | 3 | PT | all | Hsd3b2 | 15493 | 96234 | 0.51 | 19.7 | 3.7 | 0 | 0 | |
| 68 | 3 | PT | all | Them7 | 74088 | 1921338 | 0.5 | 19.3 | 3.4 | 0 | 0 | |
| 68 | 3 | PT | all | Lap3 | 66988 | 1914238 | 0.5 | 29.4 | 12.4 | 0 | 0 | |
| 68 | 3 | PT | all | Tmem106a | 217203 | 1922056 | 0.5 | 21.3 | 5 | 0 | 0 |