Marker Genes
Dataset: Single-cell transcriptomics of the mouse kidney reveals potential cellular targets of kidney disease
- tissue: Kidney
- ontology: Kidney
- genotype: C57BL/6
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 29622724
- subset name: all
- total genes: 16383
- clustering: Seurat
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE107585
Rows:47
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68 | 15 | NK | all | Ccl5 | 20304 | 98262 | 5.12 | 99 | 1.6 | 0 | 0 | |
| 68 | 15 | NK | all | Gzma | 14938 | 109266 | 4.55 | 92.3 | 0.3 | 0 | 0 | |
| 68 | 15 | NK | all | Nkg7 | 72310 | 1931250 | 3.51 | 99.7 | 1.9 | 0 | 0 | |
| 68 | 15 | NK | all | Gzmb | 14939 | 109267 | 2.54 | 66.1 | 0.1 | 0 | 0 | |
| 68 | 15 | NK | all | Klrd1 | 16643 | 1196275 | 2.28 | 74.4 | 0.8 | 0 | 0 | |
| 68 | 15 | NK | all | Klrk1 | 27007 | 1196250 | 2.13 | 70.9 | 0.7 | 0 | 0 | |
| 68 | 15 | NK | all | Ccnd2 | 12444 | 88314 | 1.91 | 67.4 | 2.5 | 4.61E-248 | 2.89E-245 | |
| 68 | 15 | NK | all | Klre1 | 243655 | 2662547 | 1.85 | 60.4 | 0.2 | 0 | 0 | |
| 68 | 15 | NK | all | Irf8 | 15900 | 96395 | 1.79 | 44.7 | 2.2 | 4.97E-169 | 1.42E-166 | |
| 68 | 15 | NK | all | Klra4 | 16635 | 101904 | 1.72 | 31 | 0 | 7.04E-202 | 2.55E-199 | |
| 68 | 15 | NK | all | Ncr1 | 17086 | 1336212 | 1.69 | 47 | 0.1 | 1.35E-290 | 1.22E-287 | |
| 68 | 15 | NK | all | Cma1 | 17228 | 96941 | 1.68 | 37.1 | 0 | 1.44E-245 | 8.36E-243 | |
| 68 | 15 | NK | all | Klrb1c | 17059 | 107538 | 1.68 | 52.1 | 0.4 | 5.53E-279 | 4.74E-276 | |
| 68 | 15 | NK | all | Ctsw | 13041 | 1338045 | 1.62 | 53 | 1.2 | 3.23E-218 | 1.42E-215 | |
| 68 | 15 | NK | all | Dusp2 | 13537 | 101911 | 1.58 | 51.8 | 1.2 | 5.04E-210 | 2.0E-207 | |
| 68 | 15 | NK | all | Txk | 22165 | 102960 | 1.55 | 52.4 | 1.1 | 5.58E-218 | 2.39E-215 | |
| 68 | 15 | NK | all | Itgb2 | 16414 | 96611 | 1.43 | 50.5 | 1.3 | 1.47E-200 | 5.21E-198 | |
| 68 | 15 | NK | all | Jak1 | 16451 | 96628 | 1.28 | 63.6 | 15.6 | 6.49E-129 | 1.14E-126 | |
| 68 | 15 | NK | all | Klrc1 | 16641 | 1336161 | 1.27 | 28.1 | 0.3 | 1.65E-128 | 2.79E-126 | |
| 68 | 15 | NK | all | Klra8 | 16639 | 102968 | 1.23 | 18.2 | 0 | 6.29E-116 | 8.75E-114 | |
| 68 | 15 | NK | all | Dok2 | 13449 | 1332623 | 1.22 | 39.6 | 0.9 | 1.3E-156 | 3.36E-154 | |
| 68 | 15 | NK | all | Cst7 | 13011 | 1298217 | 1.14 | 33.2 | 0.3 | 2.07E-165 | 5.81E-163 | |
| 68 | 15 | NK | all | Klra7 | 16638 | 101901 | 1.1 | 19.2 | 0 | 4.48E-119 | 6.75E-117 | |
| 68 | 15 | NK | all | Klra9 | 16640 | 1321153 | 1.08 | 20.8 | 0 | 7.35E-127 | 1.2E-124 | |
| 68 | 15 | NK | all | Ugcg | 22234 | 1332243 | 1.08 | 36.1 | 2.4 | 5.68E-103 | 6.38E-101 | |
| 68 | 15 | NK | all | Gm19585 | 100503190 | 5011770 | 1.02 | 29.4 | 0.4 | 2.32E-127 | 3.81E-125 | |
| 68 | 15 | NK | all | Hsd11b1 | 15483 | 103562 | 1.01 | 31.6 | 1.3 | 5.08E-106 | 6.17E-104 | |
| 68 | 15 | NK | all | Klrc2 | 16642 | 1336162 | 1 | 27.2 | 0.2 | 8.41E-134 | 1.63E-131 | |
| 68 | 15 | NK | all | Il18rap | 16174 | 1338888 | 0.94 | 29.7 | 0.3 | 6.18E-140 | 1.31E-137 | |
| 68 | 15 | NK | all | Cap1 | 12331 | 88262 | 0.93 | 32.9 | 5.3 | 3.15E-62 | 1.97E-60 | |
| 68 | 15 | NK | all | Klrb1b | 80782 | 107539 | 0.92 | 20.1 | 0.2 | 2.2E-99 | 2.31E-97 | |
| 68 | 15 | NK | all | Samd3 | 268288 | 2685469 | 0.9 | 25.6 | 0.3 | 1.2E-114 | 1.62E-112 | |
| 68 | 15 | NK | all | Lfng | 16848 | 1095413 | 0.88 | 26.5 | 0.8 | 4.01E-91 | 3.82E-89 | |
| 68 | 15 | NK | all | Lamb3 | 16780 | 99915 | 0.88 | 23.6 | 0.4 | 5.43E-98 | 5.59E-96 | |
| 68 | 15 | NK | all | Vps37b | 330192 | 1916724 | 0.84 | 26.5 | 2.9 | 4.87E-63 | 3.09E-61 | |
| 68 | 15 | NK | all | Klrb1a | 17057 | 107540 | 0.83 | 22.4 | 0.1 | 9.46E-129 | 1.64E-126 | |
| 68 | 15 | NK | all | Fasl | 14103 | 99255 | 0.81 | 20.8 | 0.2 | 2.49E-93 | 2.43E-91 | |
| 68 | 15 | NK | all | Klra1 | 16627 | 101907 | 0.79 | 17.6 | 0 | 5.4E-104 | 6.14E-102 | |
| 68 | 15 | NK | all | Dapk2 | 13143 | 1341297 | 0.75 | 20.1 | 0.5 | 5.07E-79 | 4.1E-77 | |
| 68 | 15 | NK | all | Ifitm10 | 320802 | 2444776 | 0.75 | 19.8 | 0.3 | 1.07E-84 | 9.4E-83 | |
| 68 | 15 | NK | all | Prf1 | 18646 | 97551 | 0.74 | 18.8 | 0 | 3.15E-117 | 4.57E-115 | |
| 68 | 15 | NK | all | Tbx21 | 57765 | 1888984 | 0.72 | 20.8 | 0.2 | 3.57E-102 | 3.93E-100 | |
| 68 | 15 | NK | all | Klrb1f | 232408 | 2442965 | 0.67 | 16.6 | 0.2 | 5.68E-75 | 4.4E-73 | |
| 68 | 15 | NK | all | Chsy1 | 269941 | 2681120 | 0.67 | 20.1 | 1.9 | 2.31E-46 | 1.13E-44 | |
| 68 | 15 | NK | all | Pole4 | 66979 | 1914229 | 0.66 | 33.5 | 13.6 | 3.23E-28 | 1.15E-26 | |
| 68 | 15 | NK | all | Gem | 14579 | 99844 | 0.59 | 14.7 | 0.7 | 1.84E-46 | 9.04E-45 | |
| 68 | 15 | NK | all | Ctla2b | 13025 | 88555 | 0.55 | 15.3 | 0.3 | 3.36E-62 | 2.09E-60 |