Marker Genes
Dataset: Single-cell transcriptomics of the mouse kidney reveals potential cellular targets of kidney disease
- tissue: Kidney
- ontology: Kidney
- genotype: C57BL/6
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 29622724
- subset name: all
- total genes: 16383
- clustering: Seurat
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE107585
Rows:19
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
68 | 14 | T lymphocyte | all | Ltb | 16994 | 104796 | 2.06 | 64.1 | 0.7 | 0 | 0 | |
68 | 14 | T lymphocyte | all | Rpl12 | 269261 | 98002 | 1.71 | 97.3 | 59.7 | 0 | 0 | |
68 | 14 | T lymphocyte | all | Gimap3 | 83408 | 1932723 | 1.57 | 48.7 | 0.7 | 0 | 0 | |
68 | 14 | T lymphocyte | all | Rps16 | 20055 | 98118 | 1.5 | 99.8 | 84.1 | 0 | 0 | |
68 | 14 | T lymphocyte | all | Cxcr6 | 80901 | 1934582 | 1.47 | 36.9 | 0.1 | 0 | 0 | |
68 | 14 | T lymphocyte | all | Rps4x | 20102 | 98158 | 1.42 | 99.2 | 79.3 | 0 | 0 | |
68 | 14 | T lymphocyte | all | Il7r | 16197 | 96562 | 1.33 | 32.9 | 0.1 | 0 | 0 | |
68 | 14 | T lymphocyte | all | Rps23 | 66475 | 1913725 | 1.25 | 99.8 | 89.6 | 0 | 0 | |
68 | 14 | T lymphocyte | all | Gm10260 | 100039740 | 3642298 | 1.2 | 94.9 | 79.9 | 0 | 0 | |
68 | 14 | T lymphocyte | all | Rplp1 | 56040 | 1927099 | 1.09 | 99.6 | 92 | 0 | 0 | |
68 | 14 | T lymphocyte | all | Satb1 | 20230 | 105084 | 1 | 28.4 | 0.7 | 0 | 0 | |
68 | 14 | T lymphocyte | all | Bcl11b | 58208 | 1929913 | 0.95 | 32 | 5.4 | 1.03e-256 | 7.95e-255 | |
68 | 14 | T lymphocyte | all | Lef1 | 16842 | 96770 | 0.86 | 18.9 | 0.1 | 0 | 0 | |
68 | 14 | T lymphocyte | all | Fam189b | 68521 | 1915771 | 0.81 | 22.2 | 0.7 | 4.24875146965757e-310 | 0 | |
68 | 14 | T lymphocyte | all | Rasgrp1 | 19419 | 1314635 | 0.79 | 21.4 | 0.4 | 3.08862124697216e-317 | 2.90508930306836e-315 | |
68 | 14 | T lymphocyte | all | Rapgef6 | 192786 | 2384761 | 0.75 | 25.5 | 4.6 | 1.7e-188 | 9.52e-187 | |
68 | 14 | T lymphocyte | all | Tpt1 | 22070 | 104890 | 0.71 | 99.5 | 92.7 | 0 | 0 | |
68 | 14 | T lymphocyte | all | Socs2 | 216233 | 1201787 | 0.71 | 18.4 | 4.5 | 1.98e-139 | 9.16e-138 | |
68 | 14 | T lymphocyte | all | Itk | 16428 | 96621 | 0.58 | 14.5 | 0.1 | 1.38e-251 | 1.05e-249 |