Marker Genes
Dataset: Single-cell transcriptomics of the mouse kidney reveals potential cellular targets of kidney disease
- tissue: Kidney
- ontology: Kidney
- genotype: C57BL/6
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 29622724
- subset name: all
- total genes: 16383
- clustering: Seurat
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE107585
Rows:70
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
68 | 13 | B lymphocyte | all | Jchain | 16069 | 96493 | 5.78 | 37.9 | 0.8 | 1.3e-286 | 4.22e-283 | |
68 | 13 | B lymphocyte | all | Slpi | 20568 | 109297 | 3.48 | 16.6 | 0.4 | 4.06e-63 | 4.26e-61 | |
68 | 13 | B lymphocyte | all | Mzb1 | 69816 | 1917066 | 2.92 | 59.1 | 0.3 | 4.5e-305 | 1.83e-301 | |
68 | 13 | B lymphocyte | all | Cd79a | 12518 | 101774 | 2.56 | 81.3 | 0 | 0 | 0 | |
68 | 13 | B lymphocyte | all | Cd79b | 15985 | 96431 | 2.33 | 71.1 | 0.2 | 0 | 0 | |
68 | 13 | B lymphocyte | all | Ly6d | 17068 | 96881 | 2.29 | 57.9 | 0.2 | 1.32e-265 | 3.58e-262 | |
68 | 13 | B lymphocyte | all | Ebf1 | 13591 | 95275 | 2.28 | 59.1 | 0.6 | 1.39e-240 | 3.24e-237 | |
68 | 13 | B lymphocyte | all | Mef2c | 17260 | 99458 | 1.91 | 67.7 | 1.5 | 1.47e-222 | 2.65e-219 | |
68 | 13 | B lymphocyte | all | Sec11c | 66286 | 1913536 | 1.89 | 45.1 | 13.4 | 6.5e-219 | 1.06e-215 | |
68 | 13 | B lymphocyte | all | Txndc5 | 105245 | 2145316 | 1.83 | 42.6 | 8.2 | 4.34e-197 | 4.41e-194 | |
68 | 13 | B lymphocyte | all | Hsp90b1 | 22027 | 98817 | 1.7 | 45.5 | 33.8 | 4.22e-199 | 4.57e-196 | |
68 | 13 | B lymphocyte | all | Ms4a1 | 12482 | 88321 | 1.58 | 29.8 | 0 | 8.02e-155 | 5.02e-152 | |
68 | 13 | B lymphocyte | all | Cd37 | 12493 | 88330 | 1.54 | 43.4 | 1.5 | 4.9e-129 | 1.77e-126 | |
68 | 13 | B lymphocyte | all | Gm31243 | 102633410 | 5590402 | 1.48 | 28.9 | 0 | 2.44e-141 | 1.32e-138 | |
68 | 13 | B lymphocyte | all | Sdf2l1 | 64136 | 2149842 | 1.47 | 29.8 | 4.3 | 2.99e-96 | 5.35e-94 | |
68 | 13 | B lymphocyte | all | H2-DMb2 | 15000 | 95923 | 1.45 | 31.1 | 0.3 | 1.52e-127 | 5.37e-125 | |
68 | 13 | B lymphocyte | all | Gm30211 | 102632036 | 5589370 | 1.44 | 34 | 0 | 3.33e-176 | 2.71e-173 | |
68 | 13 | B lymphocyte | all | Serp1 | 28146 | 92638 | 1.37 | 60.9 | 28.2 | 1.52e-133 | 7.26e-131 | |
68 | 13 | B lymphocyte | all | Manf | 74840 | 1922090 | 1.36 | 37 | 15.6 | 2.95e-97 | 5.51e-95 | |
68 | 13 | B lymphocyte | all | Fcmr | 69169 | 1916419 | 1.32 | 26 | 0.9 | 6.02e-99 | 1.15e-96 | |
68 | 13 | B lymphocyte | all | Xbp1 | 22433 | 98970 | 1.32 | 33.2 | 12.2 | 2.85e-101 | 5.59e-99 | |
68 | 13 | B lymphocyte | all | Bank1 | 242248 | 2442120 | 1.27 | 26 | 0.1 | 4.27e-123 | 1.24e-120 | |
68 | 13 | B lymphocyte | all | Ssr4 | 20832 | 1099464 | 1.26 | 46 | 36.2 | 4.45e-129 | 1.68e-126 | |
68 | 13 | B lymphocyte | all | Edem1 | 192193 | 2180139 | 1.26 | 33.2 | 5.7 | 1.75e-84 | 2.69e-82 | |
68 | 13 | B lymphocyte | all | Vpreb3 | 22364 | 98938 | 1.22 | 27.2 | 0 | 5.87e-140 | 2.99e-137 | |
68 | 13 | B lymphocyte | all | H2-Ob | 15002 | 95925 | 1.22 | 23.4 | 0.1 | 9.16e-109 | 1.99e-106 | |
68 | 13 | B lymphocyte | all | Pou2af1 | 18985 | 105086 | 1.2 | 36.6 | 0 | 1.54e-188 | 1.4e-185 | |
68 | 13 | B lymphocyte | all | Creld2 | 76737 | 1923987 | 1.16 | 30.2 | 4.9 | 5.4e-75 | 7.38e-73 | |
68 | 13 | B lymphocyte | all | Derl3 | 70377 | 1917627 | 1.15 | 29.8 | 0.2 | 1.66e-126 | 5.62e-124 | |
68 | 13 | B lymphocyte | all | Siglecg | 243958 | 2443630 | 1.14 | 23.4 | 0.1 | 5.86e-114 | 1.44e-111 | |
68 | 13 | B lymphocyte | all | Ralgps2 | 78255 | 1925505 | 1.13 | 35.3 | 3.8 | 3.25e-83 | 4.9e-81 | |
68 | 13 | B lymphocyte | all | 4930523C07Rik | 67647 | 1914897 | 1.13 | 35.7 | 4.2 | 2.76e-64 | 3.02e-62 | |
68 | 13 | B lymphocyte | all | Sec61b | 66212 | 1913462 | 1.12 | 56.2 | 41.3 | 1.98e-96 | 3.57e-94 | |
68 | 13 | B lymphocyte | all | Gm8369 | 666926 | 3645380 | 1.11 | 21.7 | 0.5 | 2.86e-65 | 3.24e-63 | |
68 | 13 | B lymphocyte | all | Rexo2 | 104444 | 1888981 | 1.04 | 37.9 | 16.9 | 1.99e-63 | 2.13e-61 | |
68 | 13 | B lymphocyte | all | H13 | 14950 | 95886 | 0.99 | 34.9 | 13.8 | 2.3e-53 | 2.07e-51 | |
68 | 13 | B lymphocyte | all | Krtcap2 | 66059 | 1913309 | 0.98 | 46.8 | 27.9 | 3.41e-60 | 3.36e-58 | |
68 | 13 | B lymphocyte | all | Ptp4a3 | 19245 | 1277098 | 0.98 | 28.1 | 1.3 | 9.88e-65 | 1.1e-62 | |
68 | 13 | B lymphocyte | all | Fchsd2 | 207278 | 2448475 | 0.96 | 24.7 | 2.7 | 8.19e-53 | 7.05e-51 | |
68 | 13 | B lymphocyte | all | Pold4 | 69745 | 1916995 | 0.95 | 29.4 | 7.4 | 7.33e-47 | 5.76e-45 | |
68 | 13 | B lymphocyte | all | Tnfrsf13b | 57916 | 1889411 | 0.91 | 30.2 | 0.3 | 1.03e-106 | 2.14e-104 | |
68 | 13 | B lymphocyte | all | Cmah | 12763 | 103227 | 0.91 | 31.1 | 3.8 | 1.64e-54 | 1.51e-52 | |
68 | 13 | B lymphocyte | all | Prdx4 | 53381 | 1859815 | 0.89 | 28.1 | 4.7 | 2.93e-43 | 2.15e-41 | |
68 | 13 | B lymphocyte | all | Tnfrsf17 | 21935 | 1343050 | 0.86 | 23.4 | 0 | 4.15e-121 | 1.12e-118 | |
68 | 13 | B lymphocyte | all | Hspa5 | 14828 | 95835 | 0.86 | 40 | 29.5 | 3.48e-42 | 2.51e-40 | |
68 | 13 | B lymphocyte | all | Hvcn1 | 74096 | 1921346 | 0.83 | 17 | 0.5 | 6.02e-53 | 5.21e-51 | |
68 | 13 | B lymphocyte | all | Trp53inp1 | 60599 | 1926609 | 0.82 | 28.5 | 4.5 | 9.16e-43 | 6.72e-41 | |
68 | 13 | B lymphocyte | all | Fcrla | 98752 | 2138647 | 0.8 | 19.1 | 0.1 | 3.57e-87 | 5.69e-85 | |
68 | 13 | B lymphocyte | all | Ckap4 | 216197 | 2444926 | 0.8 | 24.7 | 1.8 | 1.05e-51 | 8.82e-50 | |
68 | 13 | B lymphocyte | all | Dnajc3 | 100037258 | 107373 | 0.79 | 31.5 | 15.1 | 2.72e-32 | 1.58e-30 | |
68 | 13 | B lymphocyte | all | Edem2 | 108687 | 1915540 | 0.79 | 28.1 | 4.3 | 6e-40 | 4.03e-38 | |
68 | 13 | B lymphocyte | all | Pafah1b3 | 18476 | 108414 | 0.78 | 28.9 | 3.7 | 1.77e-43 | 1.31e-41 | |
68 | 13 | B lymphocyte | all | Blnk | 17060 | 96878 | 0.78 | 27.7 | 3.5 | 3.33e-42 | 2.42e-40 | |
68 | 13 | B lymphocyte | all | Tnfrsf13c | 72049 | 1919299 | 0.78 | 16.2 | 0 | 1.18e-78 | 1.68e-76 | |
68 | 13 | B lymphocyte | all | Pax5 | 18507 | 97489 | 0.76 | 14 | 0 | 2.53e-73 | 3.26e-71 | |
68 | 13 | B lymphocyte | all | H2-Oa | 15001 | 95924 | 0.74 | 14 | 0.3 | 4.41e-47 | 3.49e-45 | |
68 | 13 | B lymphocyte | all | Txndc11 | 106200 | 1923620 | 0.72 | 28.9 | 7.2 | 4.9e-29 | 2.66e-27 | |
68 | 13 | B lymphocyte | all | Btla | 208154 | 2658978 | 0.7 | 16.6 | 0.1 | 7.39e-63 | 7.71e-61 | |
68 | 13 | B lymphocyte | all | Smap2 | 69780 | 1917030 | 0.69 | 22.1 | 5 | 7.1e-27 | 3.63e-25 | |
68 | 13 | B lymphocyte | all | Cd22 | 12483 | 88322 | 0.68 | 12.3 | 0 | 2.17e-58 | 2.08e-56 | |
68 | 13 | B lymphocyte | all | Cd19 | 12478 | 88319 | 0.67 | 13.6 | 0 | 2.68e-71 | 3.35e-69 | |
68 | 13 | B lymphocyte | all | Scd1 | 20249 | 98239 | 0.66 | 12.8 | 0.7 | 3.42e-31 | 1.94e-29 | |
68 | 13 | B lymphocyte | all | Tent5c | 74645 | 1921895 | 0.65 | 24.3 | 1.5 | 8.55e-49 | 6.95e-47 | |
68 | 13 | B lymphocyte | all | Srp9 | 27058 | 1350930 | 0.64 | 50.2 | 39.7 | 7.68e-28 | 4.02e-26 | |
68 | 13 | B lymphocyte | all | Fkbp11 | 66120 | 1913370 | 0.61 | 19.1 | 3.1 | 1.81e-23 | 8.32e-22 | |
68 | 13 | B lymphocyte | all | Snx2 | 67804 | 1915054 | 0.61 | 19.1 | 7.8 | 1.91e-20 | 8.13e-19 | |
68 | 13 | B lymphocyte | all | Sec61a1 | 53421 | 1858417 | 0.57 | 30.6 | 12.4 | 2.39e-17 | 9.31e-16 | |
68 | 13 | B lymphocyte | all | Spcs3 | 76687 | 1923937 | 0.57 | 26.8 | 7.5 | 9.27e-20 | 3.89e-18 | |
68 | 13 | B lymphocyte | all | Spib | 272382 | 892986 | 0.56 | 10.6 | 0.1 | 2.05e-41 | 1.44e-39 | |
68 | 13 | B lymphocyte | all | Eaf2 | 106389 | 2146616 | 0.53 | 23.8 | 9.5 | 4.4e-15 | 1.59e-13 |