Marker Genes
Dataset: Single cell RNA-sequencing identifies a metabolic aspect of apoptosis in Rbf mutant
- tissue: eye disc
- ontology: eye disc
- genotype: Rbf120a/FM7, GFP
- stage:
- treatment condition: Combined Mutant
- cell/nucleus: Cells
- pmid: 30479347
- subset name: combined_WT
- total genes: Not reported
- clustering: Seurat
- pseudotime: Not reported
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE115476, https://www.ebi.ac.uk/arrayexpress/experiments/E-MTAB-7195/
Rows:43
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | lncRNA:CR33938 | 3772088 | FBgn0063127 | 0.97 | 0.96 | 0.7 | 5.7247487168453E-207 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | dac | 34982 | FBgn0005677 | 1.41 | 0.55 | 0.15 | 4.1835329935748E-146 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | Optix | 44108 | FBgn0025360 | 1.43 | 0.4 | 0.06 | 5.3521817748708E-125 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | h | 38995 | FBgn0001168 | 1.44 | 0.48 | 0.15 | 5.020085037463E-121 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | toy | 43833 | FBgn0019650 | 0.97 | 0.58 | 0.29 | 2.5303328085871E-88 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | stg | 43466 | FBgn0003525 | 1.05 | 0.59 | 0.3 | 1.025698116024E-83 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | CNBP | 37646 | FBgn0034802 | 0.31 | 0.98 | 0.96 | 1.3656122625977E-56 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | Df31 | 35418 | FBgn0022893 | 0.3 | 0.96 | 0.94 | 1.6714141062985E-38 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | CG2852 | 37591 | FBgn0034753 | 0.37 | 0.91 | 0.83 | 3.3369140297926E-37 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | trn | 39491 | FBgn0010452 | 0.73 | 0.39 | 0.23 | 3.2557650266738E-33 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | His4r | 41773 | FBgn0013981 | 0.3 | 0.84 | 0.77 | 4.2898551130734E-28 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | frm | 38624 | FBgn0035612 | 0.7 | 0.31 | 0.15 | 9.4362031830071E-28 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | ImpE1 | 45879 | FBgn0001253 | 0.52 | 0.59 | 0.41 | 1.3650161518858E-27 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | sea | 3772221 | FBgn0037912 | 0.46 | 0.37 | 0.23 | 4.3731830077413E-25 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | CG31997 | 319064 | FBgn0051997 | 0.56 | 0.42 | 0.26 | 1.8694291207924E-24 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | CG43658 | 32729 | FBgn0263706 | 0.54 | 0.5 | 0.35 | 3.6659418428844E-24 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | glec | 42571 | FBgn0015229 | 0.65 | 0.33 | 0.23 | 8.4943312401781E-21 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | fj | 37089 | FBgn0000658 | 0.56 | 0.39 | 0.24 | 7.5297857122671E-20 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | jigr1 | 43093 | FBgn0039350 | 0.61 | 0.31 | 0.18 | 9.3789800311787E-17 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | CG42671 | 39268 | FBgn0261553 | 0.69 | 0.4 | 0.31 | 1.1996204584635E-16 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | bic | 45827 | FBgn0000181 | 0.26 | 0.67 | 0.6 | 2.5968966256096E-16 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | Lk6 | 44672 | FBgn0017581 | 0.32 | 0.68 | 0.61 | 3.943686724468E-16 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | Cirl | 35846 | FBgn0033313 | 0.35 | 0.62 | 0.53 | 1.423418138183E-15 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | Ip259 | 34419 | FBgn0025366 | 0.35 | 0.43 | 0.35 | 3.9650443327969E-15 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | ovo | 31429 | FBgn0003028 | 0.41 | 0.35 | 0.24 | 7.7938152612158E-15 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | drl | 44355 | FBgn0015380 | 0.48 | 0.32 | 0.21 | 1.3006448003921E-13 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | CG15628 | 33681 | FBgn0031632 | 0.47 | 0.39 | 0.29 | 2.0564132271494E-13 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | N | 31293 | FBgn0004647 | 0.3 | 0.71 | 0.62 | 7.4402462466658E-13 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | MYPT-75D | 40032 | FBgn0036801 | 0.51 | 0.26 | 0.18 | 1.1382188606093E-12 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | Aps | 39226 | FBgn0036111 | 0.34 | 0.5 | 0.41 | 1.7305962134622E-11 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | Hsp70Bc | 48583 | FBgn0013279 | 0.45 | 0.38 | 0.28 | 6.3757001706941E-11 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | Gp150 | 37549 | FBgn0013272 | 0.36 | 0.42 | 0.33 | 6.2297785157293E-10 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | olf413 | 40453 | FBgn0037153 | 0.37 | 0.32 | 0.24 | 6.151333609789E-8 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | hang | 32613 | FBgn0026575 | 0.32 | 0.36 | 0.29 | 8.6782416946195E-8 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | Idh | 44291 | FBgn0001248 | 0.3 | 0.4 | 0.32 | 9.4915632800324E-8 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | Btk29A | 34132 | FBgn0003502 | 0.36 | 0.31 | 0.25 | 3.5391091672349E-7 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | lncRNA:CR42491 | 8673998 | FBgn0259993 | 0.32 | 0.3 | 0.23 | 2.1044076151623E-6 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | jvl | 41788 | FBgn0263929 | 0.34 | 0.28 | 0.22 | 5.7896022418782E-6 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | CG14478 | 36964 | FBgn0028953 | 0.28 | 0.37 | 0.31 | 9.3049898145331E-6 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | miple2 | 44787 | FBgn0029002 | 0.29 | 0.31 | 0.26 | 1.625240167709E-5 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | shg | 37386 | FBgn0003391 | 0.32 | 0.31 | 0.24 | 2.8407434376613E-5 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | par-1 | 2768852 | FBgn0260934 | 0.25 | 0.34 | 0.3 | 3.4920226061285E-5 | |
| 56 | 7 | PPN | Pre-Proneural Domain cells | combined_WT | eIF3k | 37475 | FBgn0034654 | 0.26 | 0.3 | 0.25 | 0.001446009910962 |