Marker Genes
Dataset: Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq
- tissue: Habenula
- ontology: Brain
- genotype: Tg(gng8-nfsB-CAAX-GFP)
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 29576475
- subset name: all
- total genes: Not reported
- clustering: Seurat
- pseudotime: Not reported
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE105115
Rows:9
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53 | 5 | Hb06 | all | foxa1 | 30541 | ZDB-GENE-990415-78 | 0 | |||||
| 53 | 5 | Hb06 | all | lrrtm1 | 570385 | ZDB-GENE-050506-80 | 1.00850761086921e-311 | |||||
| 53 | 5 | Hb06 | all | pou3f1 | 30398 | ZDB-GENE-980526-372 | 1.73e-258 | |||||
| 53 | 5 | Hb06 | all | pnoca | 100529086 | ZDB-GENE-101229-1 | 2.36e-203 | |||||
| 53 | 5 | Hb06 | all | grm8b | 569768 | ZDB-GENE-110421-3 | 1.15e-140 | |||||
| 53 | 5 | Hb06 | all | im:7152348 | 559250 | ZDB-GENE-041111-308 | 3.17e-192 | |||||
| 53 | 5 | Hb06 | all | pmp22b | 678607 | ZDB-GENE-060421-4337 | 1.31e-189 | |||||
| 53 | 5 | Hb06 | all | gpr78a | 557394 | ZDB-GENE-110411-251 | 8.9e-78 | |||||
| 53 | 5 | Hb06 | all | oprl1 | 402851 | ZDB-GENE-040312-4 | 2.45e-109 |