Marker Genes
Dataset: Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq
- tissue: Habenula
- ontology: Brain
- genotype: Tg(gng8-nfsB-CAAX-GFP)
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 29576475
- subset name: all
- total genes: Not reported
- clustering: Seurat
- pseudotime: Not reported
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE105115
Rows:10
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53 | 31 | Ad_Hb16 | all | her4.2 | 100148329 | ZDB-GENE-060815-1 | 0 | |||||
| 53 | 31 | Ad_Hb16 | all | fabp7a | 58128 | ZDB-GENE-000627-1 | 0 | |||||
| 53 | 31 | Ad_Hb16 | all | her4.1 | 100149863 | ZDB-GENE-980526-521 | 0 | |||||
| 53 | 31 | Ad_Hb16 | all | her15.2 | 359836 | ZDB-GENE-070627-1 | 5.31e-288 | |||||
| 53 | 31 | Ad_Hb16 | all | her15.1 | 100534909 | ZDB-GENE-030707-2 | 1.03e-280 | |||||
| 53 | 31 | Ad_Hb16 | all | si:ch211-193l2.4 | ZDB-GENE-141216-189 | 1.91e-258 | ||||||
| 53 | 31 | Ad_Hb16 | all | mdka | 30277 | ZDB-GENE-990621-1 | 8.67e-258 | |||||
| 53 | 31 | Ad_Hb16 | all | si:ch211-193l2.5 | ZDB-GENE-141216-226 | 5.78e-242 | ||||||
| 53 | 31 | Ad_Hb16 | all | her4.4 | 100149066 | ZDB-GENE-081031-104 | 1.56e-235 | |||||
| 53 | 31 | Ad_Hb16 | all | si:ch211-193l2.3 | ZDB-GENE-141216-140 | 9.49e-229 |