Marker Genes
Dataset: Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq
- tissue: Habenula
- ontology: Brain
- genotype: Tg(gng8-nfsB-CAAX-GFP)
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 29576475
- subset name: all
- total genes: Not reported
- clustering: Seurat
- pseudotime: Not reported
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE105115
Rows:10
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53 | 30 | Ad_VHb_04 | all | zgc:173443 | 100126130 | ZDB-GENE-071004-101 | 3.49e-182 | |||||
| 53 | 30 | Ad_VHb_04 | all | si:ch211-251f6.7 | 386720 | ZDB-GENE-091113-57 | 1.42e-164 | |||||
| 53 | 30 | Ad_VHb_04 | all | mprip | 558831 | ZDB-GENE-030131-4471 | 6.43e-25 | |||||
| 53 | 30 | Ad_VHb_04 | all | rergla | 436767 | ZDB-GENE-040718-198 | 1.11e-23 | |||||
| 53 | 30 | Ad_VHb_04 | all | mcl1a | 58122 | ZDB-GENE-000511-7 | 3.14e-23 | |||||
| 53 | 30 | Ad_VHb_04 | all | rgs5b | 550519 | ZDB-GENE-050417-359 | 6e-14 | |||||
| 53 | 30 | Ad_VHb_04 | all | cabz01063757.1 | NULL | 8.4e-14 | ||||||
| 53 | 30 | Ad_VHb_04 | all | fam13b | 568603 | ZDB-GENE-030131-4913 | 3.45e-13 | |||||
| 53 | 30 | Ad_VHb_04 | all | egr4 | 795099 | ZDB-GENE-080204-90 | 4.01e-12 | |||||
| 53 | 30 | Ad_VHb_04 | all | fosb | 492346 | ZDB-GENE-041114-181 | 7.3e-10 |