Marker Genes
Dataset: Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq
- tissue: Habenula
- ontology: Brain
- genotype: Tg(gng8-nfsB-CAAX-GFP)
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 29576475
- subset name: all
- total genes: Not reported
- clustering: Seurat
- pseudotime: Not reported
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE105115
Rows:10
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53 | 29 | Ad_VHb_03 | all | cd82a | 324098 | ZDB-GENE-030131-2818 | 2.6e-184 | |||||
| 53 | 29 | Ad_VHb_03 | all | ca8 | 550233 | ZDB-GENE-050417-26 | 2.13e-77 | |||||
| 53 | 29 | Ad_VHb_03 | all | junba | 407086 | ZDB-GENE-040426-2172 | 5.04e-77 | |||||
| 53 | 29 | Ad_VHb_03 | all | ier2a | 797137 | ZDB-GENE-030131-9126 | 4.32e-74 | |||||
| 53 | 29 | Ad_VHb_03 | all | onecut1 | 393545 | ZDB-GENE-040426-1469 | 2.57e-73 | |||||
| 53 | 29 | Ad_VHb_03 | all | rergla | 436767 | ZDB-GENE-040718-198 | 4.22e-69 | |||||
| 53 | 29 | Ad_VHb_03 | all | plk2b | 565576 | ZDB-GENE-070720-17 | 1e-60 | |||||
| 53 | 29 | Ad_VHb_03 | all | rgs5b | 550519 | ZDB-GENE-050417-359 | 2.62e-51 | |||||
| 53 | 29 | Ad_VHb_03 | all | nr4a1 | 431720 | ZDB-GENE-040704-11 | 1.1e-46 | |||||
| 53 | 29 | Ad_VHb_03 | all | atf3 | 393939 | ZDB-GENE-040426-728 | 3.41e-32 |