Marker Genes
Dataset: Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq
- tissue: Habenula
- ontology: Brain
- genotype: Tg(gng8-nfsB-CAAX-GFP)
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 29576475
- subset name: all
- total genes: Not reported
- clustering: Seurat
- pseudotime: Not reported
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE105115
Rows:10
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53 | 28 | Ad_VHb_02 | all | rgs5b | 550519 | ZDB-GENE-050417-359 | 0 | |||||
| 53 | 28 | Ad_VHb_02 | all | mcl1a | 58122 | ZDB-GENE-000511-7 | 1.07052993877131e-310 | |||||
| 53 | 28 | Ad_VHb_02 | all | egr4 | 795099 | ZDB-GENE-080204-90 | 3.38e-252 | |||||
| 53 | 28 | Ad_VHb_02 | all | mprip | 558831 | ZDB-GENE-030131-4471 | 5.58e-213 | |||||
| 53 | 28 | Ad_VHb_02 | all | pim1 | 572469 | ZDB-GENE-061013-139 | 3.53e-206 | |||||
| 53 | 28 | Ad_VHb_02 | all | rergla | 436767 | ZDB-GENE-040718-198 | 1.57e-203 | |||||
| 53 | 28 | Ad_VHb_02 | all | dnajb5 | 569466 | ZDB-GENE-070705-308 | 1.14e-184 | |||||
| 53 | 28 | Ad_VHb_02 | all | dusp2 | 445057 | ZDB-GENE-040801-188 | 4.74e-112 | |||||
| 53 | 28 | Ad_VHb_02 | all | nts | 101884890 | ZDB-GENE-091204-433 | 2.11e-103 | |||||
| 53 | 28 | Ad_VHb_02 | all | fosb | 492346 | ZDB-GENE-041114-181 | 4.37e-98 |